Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 RNU1-141P-201ENST00000364623 158 ntBASIC0.02□□□□□ -2.41
HOXC11O43248 Y_RNA.281-201ENST00000364774 94 ntBASIC0.02□□□□□ -2.41
HOXC11O43248 TMSB4XP3-201ENST00000445144 114 ntBASIC0.02□□□□□ -2.41
HOXC11O43248 AC109327.2-201ENST00000448339 378 ntBASIC0.02□□□□□ -2.41
HOXC11O43248 MIR2113-201ENST00000459007 91 ntBASIC0.02□□□□□ -2.41
HOXC11O43248 Y_RNA.659-201ENST00000515994 113 ntBASIC0.02□□□□□ -2.41
HOXC11O43248 RNU6-287P-201ENST00000516230 98 ntBASIC0.02□□□□□ -2.41
HOXC11O43248 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.02□□□□□ -2.41
HOXC11O43248 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
HOXC11O43248 Y_RNA.125-201ENST00000363371 111 ntBASIC0.01□□□□□ -2.41
HOXC11O43248 RNU6-1125P-201ENST00000363601 107 ntBASIC0.01□□□□□ -2.41
HOXC11O43248 SNORA51.5-201ENST00000384126 131 ntBASIC0.01□□□□□ -2.41
HOXC11O43248 RNU6-480P-201ENST00000384332 107 ntBASIC0.01□□□□□ -2.41
HOXC11O43248 RNU6-880P-201ENST00000384526 107 ntBASIC0.01□□□□□ -2.41
HOXC11O43248 AC093423.1-201ENST00000440817 142 ntBASIC0.01□□□□□ -2.41
HOXC11O43248 snoU13.11-201ENST00000459219 104 ntBASIC0.01□□□□□ -2.41
HOXC11O43248 AC141557.1-201ENST00000540982 400 ntBASIC0.01□□□□□ -2.41
HOXC11O43248 RNU6-86P-201ENST00000606534 107 ntBASIC0.01□□□□□ -2.41
HOXC11O43248 AL365222.1-201ENST00000614661 98 ntBASIC0.01□□□□□ -2.41
HOXC11O43248 RNU6-161P-201ENST00000363051 106 ntBASIC0□□□□□ -2.41
HOXC11O43248 SNORD116-21-201ENST00000384507 92 ntBASIC0□□□□□ -2.41
HOXC11O43248 MIR593-201ENST00000384856 100 ntBASIC0□□□□□ -2.41
HOXC11O43248 Y_RNA.596-201ENST00000410462 109 ntBASIC0□□□□□ -2.41
HOXC11O43248 AC008267.6-201ENST00000441664 139 ntBASIC0□□□□□ -2.41
HOXC11O43248 Y_RNA.681-201ENST00000516445 113 ntBASIC0□□□□□ -2.41
HOXC11O43248 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
HOXC11O43248 MIR3925-201ENST00000584674 77 ntBASIC0□□□□□ -2.41
HOXC11O43248 MTRNR2L2-201ENST00000604882 87 ntBASIC0□□□□□ -2.41
HOXC11O43248 AC025521.1-201ENST00000621624 286 ntBASIC0□□□□□ -2.41
HOXC11O43248 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.01□□□□□ -2.41
HOXC11O43248 MIR145-201ENST00000384967 88 ntBASIC-0.01□□□□□ -2.41
HOXC11O43248 RNU6-466P-201ENST00000391224 103 ntBASIC-0.01□□□□□ -2.41
HOXC11O43248 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.01□□□□□ -2.41
HOXC11O43248 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.01□□□□□ -2.41
HOXC11O43248 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.02□□□□□ -2.41
HOXC11O43248 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.02□□□□□ -2.41
HOXC11O43248 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.02□□□□□ -2.41
HOXC11O43248 MIR4290-201ENST00000583807 95 ntBASIC-0.02□□□□□ -2.41
HOXC11O43248 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.02□□□□□ -2.41
HOXC11O43248 SNORD45B-201ENST00000364617 72 ntBASIC-0.03□□□□□ -2.41
HOXC11O43248 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.03□□□□□ -2.41
HOXC11O43248 SNORA25.13-201ENST00000516395 103 ntBASIC-0.03□□□□□ -2.41
HOXC11O43248 AC069503.3-201ENST00000618674 145 ntBASIC-0.03□□□□□ -2.41
HOXC11O43248 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.04□□□□□ -2.42
HOXC11O43248 SNORD101-201ENST00000384027 73 ntBASIC-0.04□□□□□ -2.42
HOXC11O43248 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.04□□□□□ -2.42
HOXC11O43248 RNU6-412P-201ENST00000516434 106 ntBASIC-0.04□□□□□ -2.42
HOXC11O43248 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.04□□□□□ -2.42
HOXC11O43248 AL513043.2-201ENST00000573941 143 ntBASIC-0.04□□□□□ -2.42
HOXC11O43248 MIR4696-201ENST00000581431 70 ntBASIC-0.04□□□□□ -2.42
HOXC11O43248 MIR4473-201ENST00000583731 91 ntBASIC-0.04□□□□□ -2.42
HOXC11O43248 MIR4439-201ENST00000583746 80 ntBASIC-0.04□□□□□ -2.42
HOXC11O43248 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.04□□□□□ -2.42
HOXC11O43248 RNU6-664P-201ENST00000362381 107 ntBASIC-0.05□□□□□ -2.42
HOXC11O43248 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.05□□□□□ -2.42
HOXC11O43248 RNU6-476P-201ENST00000384726 107 ntBASIC-0.05□□□□□ -2.42
HOXC11O43248 SNORA19.1-201ENST00000410656 129 ntBASIC-0.05□□□□□ -2.42
HOXC11O43248 RNU6-75P-201ENST00000515944 104 ntBASIC-0.05□□□□□ -2.42
HOXC11O43248 MIR4460-201ENST00000577862 86 ntBASIC-0.05□□□□□ -2.42
HOXC11O43248 YWHAEP2-201ENST00000580066 112 ntBASIC-0.05□□□□□ -2.42
HOXC11O43248 MIR3910-1-201ENST00000580936 111 ntBASIC-0.05□□□□□ -2.42
HOXC11O43248 MIR548Z-201ENST00000584743 97 ntBASIC-0.05□□□□□ -2.42
HOXC11O43248 RNU4-36P-201ENST00000364294 144 ntBASIC-0.06□□□□□ -2.42
HOXC11O43248 RNU6-756P-201ENST00000383997 107 ntBASIC-0.06□□□□□ -2.42
HOXC11O43248 RNU6-22P-201ENST00000384355 107 ntBASIC-0.06□□□□□ -2.42
HOXC11O43248 MIR516B1-201ENST00000385211 90 ntBASIC-0.06□□□□□ -2.42
HOXC11O43248 MT-TY-201ENST00000387409 66 ntBASIC-0.06□□□□□ -2.42
HOXC11O43248 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
HOXC11O43248 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.06□□□□□ -2.42
HOXC11O43248 SNORA75.1-201ENST00000391130 148 ntBASIC-0.06□□□□□ -2.42
HOXC11O43248 RNA5SP163-201ENST00000410304 99 ntBASIC-0.06□□□□□ -2.42
HOXC11O43248 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.06□□□□□ -2.42
HOXC11O43248 RNU6-795P-201ENST00000516323 103 ntBASIC-0.06□□□□□ -2.42
HOXC11O43248 MIR4777-201ENST00000583710 86 ntBASIC-0.06□□□□□ -2.42
HOXC11O43248 AC103810.7-201ENST00000607821 91 ntBASIC-0.06□□□□□ -2.42
HOXC11O43248 AC084368.1-201ENST00000620935 65 ntBASIC-0.06□□□□□ -2.42
HOXC11O43248 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.07□□□□□ -2.42
HOXC11O43248 RNA5SP205-201ENST00000364653 136 ntBASIC-0.07□□□□□ -2.42
HOXC11O43248 RNU6-813P-201ENST00000384691 107 ntBASIC-0.07□□□□□ -2.42
HOXC11O43248 MIR876-201ENST00000401147 81 ntBASIC-0.07□□□□□ -2.42
HOXC11O43248 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.07□□□□□ -2.42
HOXC11O43248 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.07□□□□□ -2.42
HOXC11O43248 RNU7-159P-201ENST00000459284 62 ntBASIC-0.07□□□□□ -2.42
HOXC11O43248 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.07□□□□□ -2.42
HOXC11O43248 AC012531.4-201ENST00000616509 177 ntBASIC-0.07□□□□□ -2.42
HOXC11O43248 RNU6-929P-201ENST00000384429 107 ntBASIC-0.08□□□□□ -2.42
HOXC11O43248 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.08□□□□□ -2.42
HOXC11O43248 RNU7-85P-201ENST00000458851 63 ntBASIC-0.08□□□□□ -2.42
HOXC11O43248 RNU7-165P-201ENST00000458864 60 ntBASIC-0.08□□□□□ -2.42
HOXC11O43248 RNU6-904P-201ENST00000516206 101 ntBASIC-0.08□□□□□ -2.42
HOXC11O43248 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.08□□□□□ -2.42
HOXC11O43248 MIR548AE1-201ENST00000583292 70 ntBASIC-0.08□□□□□ -2.42
HOXC11O43248 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.08□□□□□ -2.42
HOXC11O43248 MIR6129-201ENST00000616087 109 ntBASIC-0.08□□□□□ -2.42
HOXC11O43248 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.08□□□□□ -2.42
HOXC11O43248 AC132825.6-201ENST00000638861 357 ntBASIC-0.08□□□□□ -2.42
HOXC11O43248 SNORD114-16-201ENST00000363044 70 ntBASIC-0.09□□□□□ -2.42
HOXC11O43248 RNU6-935P-201ENST00000410371 100 ntBASIC-0.09□□□□□ -2.42
HOXC11O43248 RNU6-62P-201ENST00000516526 102 ntBASIC-0.09□□□□□ -2.42
HOXC11O43248 RNU6-180P-201ENST00000516697 61 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 282.8 ms