Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC067863.3-201ENST00000624172 122 ntBASIC1.23□□□□□ -2.21
SHISA3A0PJX4 MIR378A-201ENST00000362177 66 ntBASIC1.22□□□□□ -2.21
SHISA3A0PJX4 RNU6-681P-201ENST00000364012 104 ntBASIC1.22□□□□□ -2.21
SHISA3A0PJX4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.22□□□□□ -2.21
SHISA3A0PJX4 Y_RNA.532-201ENST00000384590 113 ntBASIC1.22□□□□□ -2.21
SHISA3A0PJX4 SCARNA18B-201ENST00000458806 135 ntBASIC1.22□□□□□ -2.21
SHISA3A0PJX4 MIR617-201ENST00000385030 97 ntBASIC1.21□□□□□ -2.22
SHISA3A0PJX4 MIR517C-201ENST00000385103 95 ntBASIC1.21□□□□□ -2.22
SHISA3A0PJX4 MIR644A-201ENST00000385262 94 ntBASIC1.21□□□□□ -2.22
SHISA3A0PJX4 Y_RNA.606-201ENST00000410579 103 ntBASIC1.21□□□□□ -2.22
SHISA3A0PJX4 RNU7-74P-201ENST00000459104 62 ntBASIC1.21□□□□□ -2.22
SHISA3A0PJX4 RNA5SP255-201ENST00000516370 107 ntBASIC1.21□□□□□ -2.22
SHISA3A0PJX4 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.21□□□□□ -2.22
SHISA3A0PJX4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.21□□□□□ -2.22
SHISA3A0PJX4 RNU6-340P-201ENST00000364005 107 ntBASIC1.2□□□□□ -2.22
SHISA3A0PJX4 SNORD28-201ENST00000384706 75 ntBASIC1.2□□□□□ -2.22
SHISA3A0PJX4 MIR618-201ENST00000385287 98 ntBASIC1.2□□□□□ -2.22
SHISA3A0PJX4 MIR758-201ENST00000390227 88 ntBASIC1.2□□□□□ -2.22
SHISA3A0PJX4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.2□□□□□ -2.22
SHISA3A0PJX4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
SHISA3A0PJX4 MIR26B-201ENST00000362251 77 ntBASIC1.19□□□□□ -2.22
SHISA3A0PJX4 SNORA7.1-201ENST00000363750 139 ntBASIC1.19□□□□□ -2.22
SHISA3A0PJX4 RNU6-411P-201ENST00000384451 107 ntBASIC1.19□□□□□ -2.22
SHISA3A0PJX4 SNORA67.6-201ENST00000391093 99 ntBASIC1.19□□□□□ -2.22
SHISA3A0PJX4 RNU1-123P-201ENST00000458950 160 ntBASIC1.19□□□□□ -2.22
SHISA3A0PJX4 AC004223.1-201ENST00000479840 271 ntBASIC1.19□□□□□ -2.22
SHISA3A0PJX4 Y_RNA.681-201ENST00000516445 113 ntBASIC1.19□□□□□ -2.22
SHISA3A0PJX4 MIR3612-201ENST00000579753 87 ntBASIC1.19□□□□□ -2.22
SHISA3A0PJX4 MIR548AG2-201ENST00000581228 64 ntBASIC1.19□□□□□ -2.22
SHISA3A0PJX4 U6.81-201ENST00000612550 106 ntBASIC1.19□□□□□ -2.22
SHISA3A0PJX4 AC244669.1-204ENST00000621564 178 ntBASIC1.19□□□□□ -2.22
SHISA3A0PJX4 Y_RNA.788-201ENST00000622394 112 ntBASIC1.19□□□□□ -2.22
SHISA3A0PJX4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SHISA3A0PJX4 Y_RNA.36-201ENST00000362602 112 ntBASIC1.18□□□□□ -2.22
SHISA3A0PJX4 SNORD18A-201ENST00000363753 72 ntBASIC1.18□□□□□ -2.22
SHISA3A0PJX4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SHISA3A0PJX4 Y_RNA.565-201ENST00000384719 101 ntBASIC1.18□□□□□ -2.22
SHISA3A0PJX4 SNORD41.1-201ENST00000391000 69 ntBASIC1.18□□□□□ -2.22
SHISA3A0PJX4 SNORA17.3-201ENST00000391159 129 ntBASIC1.18□□□□□ -2.22
SHISA3A0PJX4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.18□□□□□ -2.22
SHISA3A0PJX4 snoU13.31-201ENST00000607291 104 ntBASIC1.18□□□□□ -2.22
SHISA3A0PJX4 RNU4-45P-201ENST00000365469 141 ntBASIC1.17□□□□□ -2.22
SHISA3A0PJX4 RNU6-1177P-201ENST00000391058 104 ntBASIC1.17□□□□□ -2.22
SHISA3A0PJX4 RNU6-1052P-201ENST00000411398 104 ntBASIC1.17□□□□□ -2.22
SHISA3A0PJX4 RNU6-719P-201ENST00000516671 104 ntBASIC1.17□□□□□ -2.22
SHISA3A0PJX4 MIR4498-201ENST00000577599 66 ntBASIC1.17□□□□□ -2.22
SHISA3A0PJX4 MIR4484-201ENST00000582855 83 ntBASIC1.17□□□□□ -2.22
SHISA3A0PJX4 Y_RNA.371-201ENST00000365591 113 ntBASIC1.16□□□□□ -2.22
SHISA3A0PJX4 RNU4-62P-201ENST00000410125 130 ntBASIC1.16□□□□□ -2.22
SHISA3A0PJX4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.16□□□□□ -2.22
SHISA3A0PJX4 RNU1-92P-201ENST00000517017 135 ntBASIC1.16□□□□□ -2.22
SHISA3A0PJX4 RNA5SP47-201ENST00000517230 109 ntBASIC1.16□□□□□ -2.22
SHISA3A0PJX4 SNORA31.24-201ENST00000517232 57 ntBASIC1.16□□□□□ -2.22
SHISA3A0PJX4 MIR3678-201ENST00000578455 94 ntBASIC1.16□□□□□ -2.22
SHISA3A0PJX4 MIR3134-201ENST00000579433 74 ntBASIC1.16□□□□□ -2.22
SHISA3A0PJX4 MIR4303-201ENST00000581299 66 ntBASIC1.16□□□□□ -2.22
SHISA3A0PJX4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
SHISA3A0PJX4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
SHISA3A0PJX4 RNU6-1335P-201ENST00000365426 107 ntBASIC1.15□□□□□ -2.23
SHISA3A0PJX4 MIR519E-201ENST00000385075 84 ntBASIC1.15□□□□□ -2.23
SHISA3A0PJX4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.15□□□□□ -2.23
SHISA3A0PJX4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.15□□□□□ -2.23
SHISA3A0PJX4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.15□□□□□ -2.23
SHISA3A0PJX4 MIR337-201ENST00000362281 93 ntBASIC1.14□□□□□ -2.23
SHISA3A0PJX4 RNU6-824P-201ENST00000363724 104 ntBASIC1.14□□□□□ -2.23
SHISA3A0PJX4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SHISA3A0PJX4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
SHISA3A0PJX4 RNU6-154P-201ENST00000384306 106 ntBASIC1.13□□□□□ -2.23
SHISA3A0PJX4 MIR150-201ENST00000385048 84 ntBASIC1.13□□□□□ -2.23
SHISA3A0PJX4 MIR548L-201ENST00000408303 86 ntBASIC1.13□□□□□ -2.23
SHISA3A0PJX4 AP1B1P2-201ENST00000416196 106 ntBASIC1.13□□□□□ -2.23
SHISA3A0PJX4 RNU6-523P-201ENST00000516304 54 ntBASIC1.13□□□□□ -2.23
SHISA3A0PJX4 RNU6-70P-201ENST00000516438 60 ntBASIC1.13□□□□□ -2.23
SHISA3A0PJX4 SCARNA16.5-201ENST00000517114 183 ntBASIC1.13□□□□□ -2.23
SHISA3A0PJX4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SHISA3A0PJX4 RNU6-726P-201ENST00000364680 107 ntBASIC1.12□□□□□ -2.23
SHISA3A0PJX4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.12□□□□□ -2.23
SHISA3A0PJX4 RNU7-95P-201ENST00000459222 64 ntBASIC1.12□□□□□ -2.23
SHISA3A0PJX4 RNU6-871P-201ENST00000516122 100 ntBASIC1.12□□□□□ -2.23
SHISA3A0PJX4 RNU6-752P-201ENST00000516376 102 ntBASIC1.12□□□□□ -2.23
SHISA3A0PJX4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SHISA3A0PJX4 MIR548O2-201ENST00000616090 70 ntBASIC1.12□□□□□ -2.23
SHISA3A0PJX4 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.12□□□□□ -2.23
SHISA3A0PJX4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SHISA3A0PJX4 SNORA8.1-201ENST00000384250 140 ntBASIC1.11□□□□□ -2.23
SHISA3A0PJX4 SNORD99-201ENST00000408612 74 ntBASIC1.11□□□□□ -2.23
SHISA3A0PJX4 RNU6-955P-201ENST00000410497 104 ntBASIC1.11□□□□□ -2.23
SHISA3A0PJX4 RNU6-274P-201ENST00000459566 107 ntBASIC1.11□□□□□ -2.23
SHISA3A0PJX4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.11□□□□□ -2.23
SHISA3A0PJX4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
SHISA3A0PJX4 MIR18A-201ENST00000362310 71 ntBASIC1.1□□□□□ -2.23
SHISA3A0PJX4 AC244098.3-201ENST00000424803 96 ntBASIC1.1□□□□□ -2.23
SHISA3A0PJX4 RNU7-24P-201ENST00000458867 62 ntBASIC1.1□□□□□ -2.23
SHISA3A0PJX4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.1□□□□□ -2.23
SHISA3A0PJX4 AL078603.1-201ENST00000603824 313 ntBASIC1.1□□□□□ -2.23
SHISA3A0PJX4 MIR6828-201ENST00000636181 60 ntBASIC1.1□□□□□ -2.23
SHISA3A0PJX4 RNU6-587P-201ENST00000391282 106 ntBASIC1.09□□□□□ -2.23
SHISA3A0PJX4 SNORD75.2-201ENST00000408784 58 ntBASIC1.09□□□□□ -2.23
SHISA3A0PJX4 RNU6-1015P-201ENST00000517121 99 ntBASIC1.09□□□□□ -2.23
SHISA3A0PJX4 AC011195.1-201ENST00000578177 177 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms