Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RNU7-85P-201ENST00000458851 63 ntBASIC0.35□□□□□ -2.35
TCRBV7S3A2A0A539 AP001318.4-201ENST00000616637 121 ntBASIC0.35□□□□□ -2.35
TCRBV7S3A2A0A539 RNU6-664P-201ENST00000362381 107 ntBASIC0.34□□□□□ -2.36
TCRBV7S3A2A0A539 Y_RNA.207-201ENST00000364142 106 ntBASIC0.34□□□□□ -2.36
TCRBV7S3A2A0A539 SNORD101-201ENST00000384027 73 ntBASIC0.34□□□□□ -2.36
TCRBV7S3A2A0A539 MIR519E-201ENST00000385075 84 ntBASIC0.34□□□□□ -2.36
TCRBV7S3A2A0A539 MIR2113-201ENST00000459007 91 ntBASIC0.34□□□□□ -2.36
TCRBV7S3A2A0A539 AC108740.1-201ENST00000498629 225 ntBASIC0.34□□□□□ -2.36
TCRBV7S3A2A0A539 MIR4696-201ENST00000581431 70 ntBASIC0.34□□□□□ -2.36
TCRBV7S3A2A0A539 SNORA25.9-201ENST00000365087 128 ntBASIC0.33□□□□□ -2.36
TCRBV7S3A2A0A539 SNORA2A-201ENST00000383885 135 ntBASIC0.33□□□□□ -2.36
TCRBV7S3A2A0A539 RNU6-32P-201ENST00000383948 107 ntBASIC0.33□□□□□ -2.36
TCRBV7S3A2A0A539 RNU6-13P-201ENST00000384248 107 ntBASIC0.33□□□□□ -2.36
TCRBV7S3A2A0A539 RNU6-12P-201ENST00000384604 107 ntBASIC0.33□□□□□ -2.36
TCRBV7S3A2A0A539 RNU6-41P-201ENST00000384741 107 ntBASIC0.33□□□□□ -2.36
TCRBV7S3A2A0A539 AC093423.1-201ENST00000440817 142 ntBASIC0.33□□□□□ -2.36
TCRBV7S3A2A0A539 SNORD4B-201ENST00000459083 72 ntBASIC0.33□□□□□ -2.36
TCRBV7S3A2A0A539 RNU6-65P-201ENST00000516332 98 ntBASIC0.33□□□□□ -2.36
TCRBV7S3A2A0A539 MIR4752-201ENST00000579672 72 ntBASIC0.33□□□□□ -2.36
TCRBV7S3A2A0A539 MIR4536-1-201ENST00000583537 88 ntBASIC0.33□□□□□ -2.36
TCRBV7S3A2A0A539 Y_RNA.423-201ENST00000384057 113 ntBASIC0.32□□□□□ -2.36
TCRBV7S3A2A0A539 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
TCRBV7S3A2A0A539 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.32□□□□□ -2.36
TCRBV7S3A2A0A539 AL078603.1-201ENST00000603824 313 ntBASIC0.32□□□□□ -2.36
TCRBV7S3A2A0A539 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.32□□□□□ -2.36
TCRBV7S3A2A0A539 RNU1-141P-201ENST00000364623 158 ntBASIC0.31□□□□□ -2.36
TCRBV7S3A2A0A539 SNORA40.13-201ENST00000516379 120 ntBASIC0.31□□□□□ -2.36
TCRBV7S3A2A0A539 AC243829.3-201ENST00000622177 108 ntBASIC0.31□□□□□ -2.36
TCRBV7S3A2A0A539 RNA5SP62-201ENST00000363457 110 ntBASIC0.3□□□□□ -2.36
TCRBV7S3A2A0A539 Y_RNA.348-201ENST00000365403 103 ntBASIC0.3□□□□□ -2.36
TCRBV7S3A2A0A539 Y_RNA.495-201ENST00000384435 112 ntBASIC0.3□□□□□ -2.36
TCRBV7S3A2A0A539 RNA5SP193-201ENST00000410353 107 ntBASIC0.3□□□□□ -2.36
TCRBV7S3A2A0A539 RNU6-519P-201ENST00000410590 108 ntBASIC0.3□□□□□ -2.36
TCRBV7S3A2A0A539 SNORA70.25-201ENST00000612741 95 ntBASIC0.3□□□□□ -2.36
TCRBV7S3A2A0A539 U7.3-201ENST00000616123 62 ntBASIC0.3□□□□□ -2.36
TCRBV7S3A2A0A539 MIR6513-201ENST00000621188 64 ntBASIC0.3□□□□□ -2.36
TCRBV7S3A2A0A539 RNU6-815P-201ENST00000384080 113 ntBASIC0.29□□□□□ -2.36
TCRBV7S3A2A0A539 Y_RNA.508-201ENST00000384502 114 ntBASIC0.29□□□□□ -2.36
TCRBV7S3A2A0A539 MIR518E-201ENST00000385252 88 ntBASIC0.29□□□□□ -2.36
TCRBV7S3A2A0A539 RNA5SP247-201ENST00000411181 105 ntBASIC0.29□□□□□ -2.36
TCRBV7S3A2A0A539 RNA5SP484-201ENST00000458857 111 ntBASIC0.29□□□□□ -2.36
TCRBV7S3A2A0A539 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
TCRBV7S3A2A0A539 AC069113.3-201ENST00000521019 150 ntBASIC0.29□□□□□ -2.36
TCRBV7S3A2A0A539 U7.6-201ENST00000610841 64 ntBASIC0.29□□□□□ -2.36
TCRBV7S3A2A0A539 Y_RNA.81-201ENST00000362997 102 ntBASIC0.28□□□□□ -2.36
TCRBV7S3A2A0A539 Y_RNA.239-201ENST00000364444 113 ntBASIC0.28□□□□□ -2.36
TCRBV7S3A2A0A539 RNA5SP128-201ENST00000365305 116 ntBASIC0.28□□□□□ -2.36
TCRBV7S3A2A0A539 MIR216B-201ENST00000390186 82 ntBASIC0.28□□□□□ -2.36
TCRBV7S3A2A0A539 RNU6-935P-201ENST00000410371 100 ntBASIC0.28□□□□□ -2.36
TCRBV7S3A2A0A539 RNA5SP436-201ENST00000516020 115 ntBASIC0.28□□□□□ -2.36
TCRBV7S3A2A0A539 MIR4711-201ENST00000578274 70 ntBASIC0.28□□□□□ -2.36
TCRBV7S3A2A0A539 SNORA9.1-201ENST00000362412 131 ntBASIC0.27□□□□□ -2.37
TCRBV7S3A2A0A539 Y_RNA.290-201ENST00000364879 114 ntBASIC0.27□□□□□ -2.37
TCRBV7S3A2A0A539 MIR760-201ENST00000390220 80 ntBASIC0.27□□□□□ -2.37
TCRBV7S3A2A0A539 AC073261.1-201ENST00000429409 121 ntBASIC0.27□□□□□ -2.37
TCRBV7S3A2A0A539 RNA5SP220-201ENST00000516298 104 ntBASIC0.27□□□□□ -2.37
TCRBV7S3A2A0A539 NAMPTP3-201ENST00000569273 224 ntBASIC0.27□□□□□ -2.37
TCRBV7S3A2A0A539 AC243829.6-201ENST00000612652 106 ntBASIC0.27□□□□□ -2.37
TCRBV7S3A2A0A539 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.27□□□□□ -2.37
TCRBV7S3A2A0A539 MIR4315-1-201ENST00000636800 73 ntBASIC0.27□□□□□ -2.37
TCRBV7S3A2A0A539 MIR4315-2-201ENST00000640925 73 ntBASIC0.27□□□□□ -2.37
TCRBV7S3A2A0A539 RNU6-153P-201ENST00000364422 104 ntBASIC0.26□□□□□ -2.37
TCRBV7S3A2A0A539 MIR936-201ENST00000401264 98 ntBASIC0.26□□□□□ -2.37
TCRBV7S3A2A0A539 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.26□□□□□ -2.37
TCRBV7S3A2A0A539 SNORD110-201ENST00000408189 75 ntBASIC0.26□□□□□ -2.37
TCRBV7S3A2A0A539 AC006210.1-201ENST00000424882 111 ntBASIC0.26□□□□□ -2.37
TCRBV7S3A2A0A539 AC069503.3-201ENST00000618674 145 ntBASIC0.26□□□□□ -2.37
TCRBV7S3A2A0A539 MIR6734-201ENST00000621166 68 ntBASIC0.26□□□□□ -2.37
TCRBV7S3A2A0A539 Y_RNA.190-201ENST00000363964 101 ntBASIC0.25□□□□□ -2.37
TCRBV7S3A2A0A539 RNU6-132P-201ENST00000383863 107 ntBASIC0.25□□□□□ -2.37
TCRBV7S3A2A0A539 MIR548U-201ENST00000390728 81 ntBASIC0.25□□□□□ -2.37
TCRBV7S3A2A0A539 RNU6-1232P-201ENST00000516299 86 ntBASIC0.25□□□□□ -2.37
TCRBV7S3A2A0A539 RNU6-1057P-201ENST00000517162 102 ntBASIC0.25□□□□□ -2.37
TCRBV7S3A2A0A539 MIR3064-201ENST00000581130 66 ntBASIC0.25□□□□□ -2.37
TCRBV7S3A2A0A539 MIRLET7F1-201ENST00000362202 87 ntBASIC0.24□□□□□ -2.37
TCRBV7S3A2A0A539 RNU6-640P-201ENST00000363693 105 ntBASIC0.24□□□□□ -2.37
TCRBV7S3A2A0A539 RNU6-905P-201ENST00000384434 107 ntBASIC0.24□□□□□ -2.37
TCRBV7S3A2A0A539 MIR499A-201ENST00000384903 122 ntBASIC0.24□□□□□ -2.37
TCRBV7S3A2A0A539 U3.27-201ENST00000391237 200 ntBASIC0.24□□□□□ -2.37
TCRBV7S3A2A0A539 RNU6-162P-201ENST00000516228 103 ntBASIC0.24□□□□□ -2.37
TCRBV7S3A2A0A539 RNU6-1223P-201ENST00000517124 104 ntBASIC0.24□□□□□ -2.37
TCRBV7S3A2A0A539 AC026421.1-201ENST00000519101 163 ntBASIC0.24□□□□□ -2.37
TCRBV7S3A2A0A539 MIR548AD-201ENST00000584780 82 ntBASIC0.24□□□□□ -2.37
TCRBV7S3A2A0A539 Y_RNA.224-201ENST00000364308 111 ntBASIC0.23□□□□□ -2.37
TCRBV7S3A2A0A539 RNU6-811P-201ENST00000384069 107 ntBASIC0.23□□□□□ -2.37
TCRBV7S3A2A0A539 MT-TY-201ENST00000387409 66 ntBASIC0.23□□□□□ -2.37
TCRBV7S3A2A0A539 Y_RNA.677-201ENST00000516401 85 ntBASIC0.23□□□□□ -2.37
TCRBV7S3A2A0A539 MIR4460-201ENST00000577862 86 ntBASIC0.23□□□□□ -2.37
TCRBV7S3A2A0A539 AC104996.3-201ENST00000590718 94 ntBASIC0.23□□□□□ -2.37
TCRBV7S3A2A0A539 Y_RNA.125-201ENST00000363371 111 ntBASIC0.22□□□□□ -2.37
TCRBV7S3A2A0A539 VTRNA1-3-201ENST00000365645 89 ntBASIC0.22□□□□□ -2.37
TCRBV7S3A2A0A539 MIR501-201ENST00000390204 84 ntBASIC0.22□□□□□ -2.37
TCRBV7S3A2A0A539 Y_RNA.609-201ENST00000410669 89 ntBASIC0.22□□□□□ -2.37
TCRBV7S3A2A0A539 HMGN2P22-201ENST00000427588 175 ntBASIC0.22□□□□□ -2.37
TCRBV7S3A2A0A539 RNU6-168P-201ENST00000516189 101 ntBASIC0.22□□□□□ -2.37
TCRBV7S3A2A0A539 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
TCRBV7S3A2A0A539 MALAT1.1-201ENST00000618249 95 ntBASIC0.22□□□□□ -2.37
TCRBV7S3A2A0A539 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.22□□□□□ -2.37
TCRBV7S3A2A0A539 RNU6-42P-201ENST00000384165 107 ntBASIC0.21□□□□□ -2.38
TCRBV7S3A2A0A539 MIR451A-201ENST00000385059 72 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 189.8 ms