Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 SNORA8.2-201ENST00000384372 139 ntBASIC0.77□□□□□ -2.29
CCDC163A0A0D9SF12 RNA5SP121-201ENST00000516537 101 ntBASIC0.77□□□□□ -2.29
CCDC163A0A0D9SF12 SNORD114-23-201ENST00000363536 72 ntBASIC0.76□□□□□ -2.29
CCDC163A0A0D9SF12 RNU6-640P-201ENST00000363693 105 ntBASIC0.76□□□□□ -2.29
CCDC163A0A0D9SF12 RNU6-945P-201ENST00000383947 107 ntBASIC0.76□□□□□ -2.29
CCDC163A0A0D9SF12 SNORD71-201ENST00000411292 86 ntBASIC0.76□□□□□ -2.29
CCDC163A0A0D9SF12 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
CCDC163A0A0D9SF12 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
CCDC163A0A0D9SF12 Y_RNA.609-201ENST00000410669 89 ntBASIC0.75□□□□□ -2.29
CCDC163A0A0D9SF12 SNORA40.8-201ENST00000411034 126 ntBASIC0.75□□□□□ -2.29
CCDC163A0A0D9SF12 MALAT1.1-201ENST00000618249 95 ntBASIC0.75□□□□□ -2.29
CCDC163A0A0D9SF12 U6.100-201ENST00000636230 99 ntBASIC0.75□□□□□ -2.29
CCDC163A0A0D9SF12 MIR924-201ENST00000638017 53 ntBASIC0.75□□□□□ -2.29
CCDC163A0A0D9SF12 MIR508-201ENST00000384857 115 ntBASIC0.74□□□□□ -2.29
CCDC163A0A0D9SF12 RNU4-54P-201ENST00000516428 129 ntBASIC0.74□□□□□ -2.29
CCDC163A0A0D9SF12 Y_RNA.596-201ENST00000410462 109 ntBASIC0.73□□□□□ -2.29
CCDC163A0A0D9SF12 MIR7107-201ENST00000611489 80 ntBASIC0.73□□□□□ -2.29
CCDC163A0A0D9SF12 RNA5SP347-201ENST00000362445 119 ntBASIC0.72□□□□□ -2.29
CCDC163A0A0D9SF12 Y_RNA.220-201ENST00000364244 109 ntBASIC0.72□□□□□ -2.29
CCDC163A0A0D9SF12 RNU6-726P-201ENST00000364680 107 ntBASIC0.72□□□□□ -2.29
CCDC163A0A0D9SF12 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC163A0A0D9SF12 RNU7-85P-201ENST00000458851 63 ntBASIC0.72□□□□□ -2.29
CCDC163A0A0D9SF12 AC026421.1-201ENST00000519101 163 ntBASIC0.72□□□□□ -2.29
CCDC163A0A0D9SF12 AC018659.1-201ENST00000551083 169 ntBASIC0.72□□□□□ -2.29
CCDC163A0A0D9SF12 MIR4711-201ENST00000578274 70 ntBASIC0.72□□□□□ -2.29
CCDC163A0A0D9SF12 MIR6828-201ENST00000636181 60 ntBASIC0.72□□□□□ -2.29
CCDC163A0A0D9SF12 MIR488-201ENST00000365739 83 ntBASIC0.71□□□□□ -2.3
CCDC163A0A0D9SF12 RNY1P7-201ENST00000384743 110 ntBASIC0.71□□□□□ -2.3
CCDC163A0A0D9SF12 RNU6-1265P-201ENST00000516342 103 ntBASIC0.71□□□□□ -2.3
CCDC163A0A0D9SF12 MIR3920-201ENST00000581751 86 ntBASIC0.71□□□□□ -2.3
CCDC163A0A0D9SF12 RNU6-1131P-201ENST00000364955 107 ntBASIC0.7□□□□□ -2.3
CCDC163A0A0D9SF12 SNORD101-201ENST00000384027 73 ntBASIC0.7□□□□□ -2.3
CCDC163A0A0D9SF12 MIR518A1-201ENST00000385068 85 ntBASIC0.7□□□□□ -2.3
CCDC163A0A0D9SF12 RNA5SP193-201ENST00000410353 107 ntBASIC0.7□□□□□ -2.3
CCDC163A0A0D9SF12 MTATP6P29-201ENST00000415057 132 ntBASIC0.7□□□□□ -2.3
CCDC163A0A0D9SF12 SNORD4B-201ENST00000459083 72 ntBASIC0.7□□□□□ -2.3
CCDC163A0A0D9SF12 RNU6-287P-201ENST00000516230 98 ntBASIC0.7□□□□□ -2.3
CCDC163A0A0D9SF12 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
CCDC163A0A0D9SF12 MIRLET7F1-201ENST00000362202 87 ntBASIC0.69□□□□□ -2.3
CCDC163A0A0D9SF12 RNU4-32P-201ENST00000363404 141 ntBASIC0.69□□□□□ -2.3
CCDC163A0A0D9SF12 SNORD115-44-201ENST00000365391 82 ntBASIC0.69□□□□□ -2.3
CCDC163A0A0D9SF12 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.69□□□□□ -2.3
CCDC163A0A0D9SF12 AC069271.1-201ENST00000445577 156 ntBASIC0.69□□□□□ -2.3
CCDC163A0A0D9SF12 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.69□□□□□ -2.3
CCDC163A0A0D9SF12 RNU6-664P-201ENST00000362381 107 ntBASIC0.68□□□□□ -2.3
CCDC163A0A0D9SF12 RNU6-1057P-201ENST00000517162 102 ntBASIC0.68□□□□□ -2.3
CCDC163A0A0D9SF12 SNORD118-201ENST00000363593 134 ntBASIC0.67□□□□□ -2.3
CCDC163A0A0D9SF12 Y_RNA.239-201ENST00000364444 113 ntBASIC0.67□□□□□ -2.3
CCDC163A0A0D9SF12 RNU6-75P-201ENST00000515944 104 ntBASIC0.67□□□□□ -2.3
CCDC163A0A0D9SF12 MIR4696-201ENST00000581431 70 ntBASIC0.67□□□□□ -2.3
CCDC163A0A0D9SF12 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.67□□□□□ -2.3
CCDC163A0A0D9SF12 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.67□□□□□ -2.3
CCDC163A0A0D9SF12 MIR330-201ENST00000362196 94 ntBASIC0.66□□□□□ -2.3
CCDC163A0A0D9SF12 Y_RNA.207-201ENST00000364142 106 ntBASIC0.66□□□□□ -2.3
CCDC163A0A0D9SF12 SNORD41.1-201ENST00000391000 69 ntBASIC0.66□□□□□ -2.3
CCDC163A0A0D9SF12 RNU6-269P-201ENST00000391077 97 ntBASIC0.66□□□□□ -2.3
CCDC163A0A0D9SF12 RNA5SP330-201ENST00000517096 96 ntBASIC0.66□□□□□ -2.3
CCDC163A0A0D9SF12 MIR4752-201ENST00000579672 72 ntBASIC0.66□□□□□ -2.3
CCDC163A0A0D9SF12 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.66□□□□□ -2.3
CCDC163A0A0D9SF12 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
CCDC163A0A0D9SF12 Y_RNA.30-201ENST00000362572 97 ntBASIC0.65□□□□□ -2.31
CCDC163A0A0D9SF12 Y_RNA.115-201ENST00000363272 98 ntBASIC0.65□□□□□ -2.31
CCDC163A0A0D9SF12 MIR2113-201ENST00000459007 91 ntBASIC0.65□□□□□ -2.31
CCDC163A0A0D9SF12 RNU7-74P-201ENST00000459104 62 ntBASIC0.65□□□□□ -2.31
CCDC163A0A0D9SF12 RNU6-1126P-201ENST00000384002 107 ntBASIC0.64□□□□□ -2.31
CCDC163A0A0D9SF12 Y_RNA.423-201ENST00000384057 113 ntBASIC0.64□□□□□ -2.31
CCDC163A0A0D9SF12 MIR548U-201ENST00000390728 81 ntBASIC0.64□□□□□ -2.31
CCDC163A0A0D9SF12 Y_RNA.258-201ENST00000364613 105 ntBASIC0.63□□□□□ -2.31
CCDC163A0A0D9SF12 RNU6-1134P-201ENST00000365156 101 ntBASIC0.63□□□□□ -2.31
CCDC163A0A0D9SF12 RNU6-811P-201ENST00000384069 107 ntBASIC0.63□□□□□ -2.31
CCDC163A0A0D9SF12 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CCDC163A0A0D9SF12 RN7SKP12-201ENST00000516275 143 ntBASIC0.63□□□□□ -2.31
CCDC163A0A0D9SF12 Y_RNA.694-201ENST00000516677 117 ntBASIC0.63□□□□□ -2.31
CCDC163A0A0D9SF12 MIR548AG2-201ENST00000581228 64 ntBASIC0.63□□□□□ -2.31
CCDC163A0A0D9SF12 MIR8087-201ENST00000612745 78 ntBASIC0.63□□□□□ -2.31
CCDC163A0A0D9SF12 AC243829.3-201ENST00000622177 108 ntBASIC0.63□□□□□ -2.31
CCDC163A0A0D9SF12 RNU6-132P-201ENST00000383863 107 ntBASIC0.62□□□□□ -2.31
CCDC163A0A0D9SF12 RNU6-49P-201ENST00000384256 107 ntBASIC0.62□□□□□ -2.31
CCDC163A0A0D9SF12 SNORD116-22-201ENST00000384430 92 ntBASIC0.62□□□□□ -2.31
CCDC163A0A0D9SF12 RNU2-59P-201ENST00000410482 191 ntBASIC0.62□□□□□ -2.31
CCDC163A0A0D9SF12 AC098934.3-201ENST00000430450 190 ntBASIC0.62□□□□□ -2.31
CCDC163A0A0D9SF12 SNORA68.3-201ENST00000515906 83 ntBASIC0.62□□□□□ -2.31
CCDC163A0A0D9SF12 Y_RNA.681-201ENST00000516445 113 ntBASIC0.62□□□□□ -2.31
CCDC163A0A0D9SF12 AL109933.3-201ENST00000619095 188 ntBASIC0.62□□□□□ -2.31
CCDC163A0A0D9SF12 RNU6-509P-201ENST00000363519 107 ntBASIC0.61□□□□□ -2.31
CCDC163A0A0D9SF12 MIR617-201ENST00000385030 97 ntBASIC0.61□□□□□ -2.31
CCDC163A0A0D9SF12 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
CCDC163A0A0D9SF12 MIR519E-201ENST00000385075 84 ntBASIC0.6□□□□□ -2.31
CCDC163A0A0D9SF12 RNU6-1052P-201ENST00000411398 104 ntBASIC0.6□□□□□ -2.31
CCDC163A0A0D9SF12 RNU6-719P-201ENST00000516671 104 ntBASIC0.6□□□□□ -2.31
CCDC163A0A0D9SF12 AL162376.1-201ENST00000624117 175 ntBASIC0.6□□□□□ -2.31
CCDC163A0A0D9SF12 RNU6-844P-201ENST00000517175 102 ntBASIC0.59□□□□□ -2.31
CCDC163A0A0D9SF12 NAMPTP3-201ENST00000569273 224 ntBASIC0.59□□□□□ -2.31
CCDC163A0A0D9SF12 MIR3064-201ENST00000581130 66 ntBASIC0.59□□□□□ -2.31
CCDC163A0A0D9SF12 MIR4668-201ENST00000582284 70 ntBASIC0.59□□□□□ -2.31
CCDC163A0A0D9SF12 AC104996.3-201ENST00000590718 94 ntBASIC0.59□□□□□ -2.31
CCDC163A0A0D9SF12 MTRNR2L2-201ENST00000604882 87 ntBASIC0.59□□□□□ -2.31
CCDC163A0A0D9SF12 Y_RNA.491-201ENST00000384417 107 ntBASIC0.58□□□□□ -2.32
CCDC163A0A0D9SF12 RNA5SP292-201ENST00000390974 118 ntBASIC0.58□□□□□ -2.32
CCDC163A0A0D9SF12 RNU6-935P-201ENST00000410371 100 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms