Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 RNU6-824P-201ENST00000363724 104 ntBASIC1.5□□□□□ -2.17
U3KQE9 RNU6-800P-201ENST00000384473 103 ntBASIC1.5□□□□□ -2.17
U3KQE9 MIR100-201ENST00000385259 80 ntBASIC1.5□□□□□ -2.17
U3KQE9 MIR1827-201ENST00000408549 66 ntBASIC1.5□□□□□ -2.17
U3KQE9 RNA5SP508-201ENST00000411327 119 ntBASIC1.5□□□□□ -2.17
U3KQE9 RNU6-274P-201ENST00000459566 107 ntBASIC1.5□□□□□ -2.17
U3KQE9 RNU6-287P-201ENST00000516230 98 ntBASIC1.5□□□□□ -2.17
U3KQE9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
U3KQE9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
U3KQE9 RNU6-330P-201ENST00000363015 107 ntBASIC1.49□□□□□ -2.17
U3KQE9 RNA5SP403-201ENST00000363598 108 ntBASIC1.49□□□□□ -2.17
U3KQE9 RNU6-471P-201ENST00000383944 106 ntBASIC1.49□□□□□ -2.17
U3KQE9 MIR1265-201ENST00000408444 86 ntBASIC1.49□□□□□ -2.17
U3KQE9 UBE2DNL-203ENST00000474922 222 ntBASIC1.49□□□□□ -2.17
U3KQE9 SNORA70.22-201ENST00000517160 124 ntBASIC1.49□□□□□ -2.17
U3KQE9 uc_338.20-201ENST00000621563 178 ntBASIC1.49□□□□□ -2.17
U3KQE9 uc_338.16-201ENST00000621804 95 ntBASIC1.49□□□□□ -2.17
U3KQE9 ZNF209P-201ENST00000593450 2304 ntBASIC1.49□□□□□ -2.17
U3KQE9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.49□□□□□ -2.17
U3KQE9 MIR676-201ENST00000390702 67 ntBASIC1.48□□□□□ -2.17
U3KQE9 SUMO2P12-201ENST00000405924 140 ntBASIC1.48□□□□□ -2.17
U3KQE9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
U3KQE9 RNU7-24P-201ENST00000458867 62 ntBASIC1.48□□□□□ -2.17
U3KQE9 MIR4435-1-201ENST00000582552 80 ntBASIC1.48□□□□□ -2.17
U3KQE9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.48□□□□□ -2.17
U3KQE9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.48□□□□□ -2.17
U3KQE9 SNORD115-31-201ENST00000365318 82 ntBASIC1.47□□□□□ -2.17
U3KQE9 RNU6-1126P-201ENST00000384002 107 ntBASIC1.47□□□□□ -2.17
U3KQE9 RNU6-895P-201ENST00000384125 103 ntBASIC1.47□□□□□ -2.17
U3KQE9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.47□□□□□ -2.17
U3KQE9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.47□□□□□ -2.17
U3KQE9 MIR2113-201ENST00000459007 91 ntBASIC1.47□□□□□ -2.17
U3KQE9 AL136317.1-201ENST00000612653 226 ntBASIC1.47□□□□□ -2.17
U3KQE9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
U3KQE9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.46□□□□□ -2.18
U3KQE9 Y_RNA.32-201ENST00000362589 110 ntBASIC1.46□□□□□ -2.18
U3KQE9 Y_RNA.205-201ENST00000364128 113 ntBASIC1.46□□□□□ -2.18
U3KQE9 Y_RNA.500-201ENST00000384466 111 ntBASIC1.46□□□□□ -2.18
U3KQE9 MIR520F-201ENST00000384824 87 ntBASIC1.46□□□□□ -2.18
U3KQE9 RNU7-74P-201ENST00000459104 62 ntBASIC1.46□□□□□ -2.18
U3KQE9 SNORA31.14-201ENST00000516728 116 ntBASIC1.46□□□□□ -2.18
U3KQE9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.46□□□□□ -2.18
U3KQE9 SNORD115-24-201ENST00000363528 82 ntBASIC1.45□□□□□ -2.18
U3KQE9 MIR617-201ENST00000385030 97 ntBASIC1.45□□□□□ -2.18
U3KQE9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.45□□□□□ -2.18
U3KQE9 SNORD75.2-201ENST00000408784 58 ntBASIC1.45□□□□□ -2.18
U3KQE9 AC093423.1-201ENST00000440817 142 ntBASIC1.45□□□□□ -2.18
U3KQE9 MIR4648-201ENST00000580107 72 ntBASIC1.45□□□□□ -2.18
U3KQE9 RMST_2.1-201ENST00000617263 136 ntBASIC1.44□□□□□ -2.18
U3KQE9 SNORA25.4-201ENST00000363666 124 ntBASIC1.43□□□□□ -2.18
U3KQE9 RNU6-1052P-201ENST00000411398 104 ntBASIC1.43□□□□□ -2.18
U3KQE9 RNU6-719P-201ENST00000516671 104 ntBASIC1.43□□□□□ -2.18
U3KQE9 RNU6-881P-201ENST00000516813 102 ntBASIC1.43□□□□□ -2.18
U3KQE9 MIR3920-201ENST00000581751 86 ntBASIC1.43□□□□□ -2.18
U3KQE9 MIR4781-201ENST00000585250 76 ntBASIC1.43□□□□□ -2.18
U3KQE9 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.43□□□□□ -2.18
U3KQE9 SNORD45.1-201ENST00000363181 77 ntBASIC1.42□□□□□ -2.18
U3KQE9 AC244098.3-201ENST00000424803 96 ntBASIC1.42□□□□□ -2.18
U3KQE9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.42□□□□□ -2.18
U3KQE9 RNU6-1110P-201ENST00000516462 101 ntBASIC1.42□□□□□ -2.18
U3KQE9 RNU7-161P-201ENST00000517289 62 ntBASIC1.42□□□□□ -2.18
U3KQE9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.42□□□□□ -2.18
U3KQE9 MIR4773-1-201ENST00000637203 78 ntBASIC1.42□□□□□ -2.18
U3KQE9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
U3KQE9 SNORA16.1-201ENST00000364597 132 ntBASIC1.41□□□□□ -2.18
U3KQE9 RNU6-382P-201ENST00000365181 106 ntBASIC1.41□□□□□ -2.18
U3KQE9 RNA5SP182-201ENST00000516064 82 ntBASIC1.41□□□□□ -2.18
U3KQE9 MIR4639-201ENST00000584938 69 ntBASIC1.41□□□□□ -2.18
U3KQE9 AL078603.1-201ENST00000603824 313 ntBASIC1.41□□□□□ -2.18
U3KQE9 AC012493.3-201ENST00000604494 112 ntBASIC1.41□□□□□ -2.18
U3KQE9 AL157834.3-201ENST00000615543 103 ntBASIC1.41□□□□□ -2.18
U3KQE9 AC067863.3-201ENST00000624172 122 ntBASIC1.41□□□□□ -2.18
U3KQE9 RNU6-1216P-201ENST00000362590 107 ntBASIC1.4□□□□□ -2.19
U3KQE9 SNORD115-22-201ENST00000364456 82 ntBASIC1.4□□□□□ -2.19
U3KQE9 Y_RNA.443-201ENST00000384135 111 ntBASIC1.4□□□□□ -2.19
U3KQE9 FABP5P4-201ENST00000437203 171 ntBASIC1.4□□□□□ -2.19
U3KQE9 AC005520.4-201ENST00000604337 90 ntBASIC1.4□□□□□ -2.19
U3KQE9 RNU6-495P-201ENST00000362995 107 ntBASIC1.39□□□□□ -2.19
U3KQE9 RNA5SP117-201ENST00000365294 118 ntBASIC1.39□□□□□ -2.19
U3KQE9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.39□□□□□ -2.19
U3KQE9 RNU7-104P-201ENST00000459398 79 ntBASIC1.39□□□□□ -2.19
U3KQE9 AC002350.1-201ENST00000490759 375 ntBASIC1.39□□□□□ -2.19
U3KQE9 MIR548AG2-201ENST00000581228 64 ntBASIC1.39□□□□□ -2.19
U3KQE9 MIR548O2-201ENST00000616090 70 ntBASIC1.39□□□□□ -2.19
U3KQE9 Y_RNA.258-201ENST00000364613 105 ntBASIC1.38□□□□□ -2.19
U3KQE9 SNORD45A-201ENST00000384512 84 ntBASIC1.38□□□□□ -2.19
U3KQE9 MIR222-201ENST00000384992 110 ntBASIC1.38□□□□□ -2.19
U3KQE9 RNU6-630P-201ENST00000391258 106 ntBASIC1.38□□□□□ -2.19
U3KQE9 AC002429.1-201ENST00000437672 148 ntBASIC1.38□□□□□ -2.19
U3KQE9 RNU6-469P-201ENST00000516253 101 ntBASIC1.38□□□□□ -2.19
U3KQE9 MIR3122-201ENST00000577243 73 ntBASIC1.38□□□□□ -2.19
U3KQE9 MIR4419B-201ENST00000577260 68 ntBASIC1.38□□□□□ -2.19
U3KQE9 AC103706.3-201ENST00000636297 85 ntBASIC1.38□□□□□ -2.19
U3KQE9 SNORD48-201ENST00000364953 64 ntBASIC1.37□□□□□ -2.19
U3KQE9 SNORA70B-201ENST00000384210 135 ntBASIC1.37□□□□□ -2.19
U3KQE9 SNORA25-201ENST00000384384 134 ntBASIC1.37□□□□□ -2.19
U3KQE9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
U3KQE9 RNU6-604P-201ENST00000390917 100 ntBASIC1.37□□□□□ -2.19
U3KQE9 AL691482.2-201ENST00000457453 84 ntBASIC1.37□□□□□ -2.19
U3KQE9 U7.7-201ENST00000459276 60 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms