Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PCDHGC4Q9Y5F7 SNORD45.1-201ENST00000363181 77 ntBASIC1.92□□□□□ -2.1
PCDHGC4Q9Y5F7 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.92□□□□□ -2.1
PCDHGC4Q9Y5F7 AC005520.4-201ENST00000604337 90 ntBASIC1.92□□□□□ -2.1
PCDHGC4Q9Y5F7 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.92□□□□□ -2.1
PCDHGC4Q9Y5F7 RNU6-630P-201ENST00000391258 106 ntBASIC1.91□□□□□ -2.1
PCDHGC4Q9Y5F7 AC003989.2-201ENST00000440224 169 ntBASIC1.91□□□□□ -2.1
PCDHGC4Q9Y5F7 RNU6-1057P-201ENST00000517162 102 ntBASIC1.91□□□□□ -2.1
PCDHGC4Q9Y5F7 AC008608.1-201ENST00000603910 127 ntBASIC1.91□□□□□ -2.1
PCDHGC4Q9Y5F7 AC106800.4-201ENST00000614905 153 ntBASIC1.91□□□□□ -2.1
PCDHGC4Q9Y5F7 AC027335.2-201ENST00000624030 375 ntBASIC1.91□□□□□ -2.1
PCDHGC4Q9Y5F7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.91□□□□□ -2.1
PCDHGC4Q9Y5F7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PCDHGC4Q9Y5F7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PCDHGC4Q9Y5F7 ZNF355P-201ENST00000427301 3216 ntBASIC1.9□□□□□ -2.11
PCDHGC4Q9Y5F7 MIR938-201ENST00000401216 83 ntBASIC1.9□□□□□ -2.11
PCDHGC4Q9Y5F7 SNORA31.2-201ENST00000516019 134 ntBASIC1.9□□□□□ -2.11
PCDHGC4Q9Y5F7 RNU6-287P-201ENST00000516230 98 ntBASIC1.9□□□□□ -2.11
PCDHGC4Q9Y5F7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.89□□□□□ -2.11
PCDHGC4Q9Y5F7 MIR583-201ENST00000384846 75 ntBASIC1.89□□□□□ -2.11
PCDHGC4Q9Y5F7 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
PCDHGC4Q9Y5F7 RNU6-1177P-201ENST00000391058 104 ntBASIC1.89□□□□□ -2.11
PCDHGC4Q9Y5F7 SNORA26.9-201ENST00000391322 122 ntBASIC1.89□□□□□ -2.11
PCDHGC4Q9Y5F7 AC093423.1-201ENST00000440817 142 ntBASIC1.89□□□□□ -2.11
PCDHGC4Q9Y5F7 RNU7-102P-201ENST00000458948 62 ntBASIC1.89□□□□□ -2.11
PCDHGC4Q9Y5F7 RN7SKP88-201ENST00000516847 250 ntBASIC1.89□□□□□ -2.11
PCDHGC4Q9Y5F7 7SK.8-201ENST00000612110 250 ntBASIC1.89□□□□□ -2.11
PCDHGC4Q9Y5F7 MIR8053-201ENST00000613344 75 ntBASIC1.89□□□□□ -2.11
PCDHGC4Q9Y5F7 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.89□□□□□ -2.11
PCDHGC4Q9Y5F7 7SK.11-201ENST00000615477 250 ntBASIC1.89□□□□□ -2.11
PCDHGC4Q9Y5F7 7SK.13-201ENST00000622040 250 ntBASIC1.89□□□□□ -2.11
PCDHGC4Q9Y5F7 MIR4773-1-201ENST00000637203 78 ntBASIC1.89□□□□□ -2.11
PCDHGC4Q9Y5F7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
PCDHGC4Q9Y5F7 SNORD115-22-201ENST00000364456 82 ntBASIC1.88□□□□□ -2.11
PCDHGC4Q9Y5F7 MIR934-201ENST00000401241 83 ntBASIC1.88□□□□□ -2.11
PCDHGC4Q9Y5F7 AC244505.6-201ENST00000452829 130 ntBASIC1.88□□□□□ -2.11
PCDHGC4Q9Y5F7 RNU6-881P-201ENST00000516813 102 ntBASIC1.88□□□□□ -2.11
PCDHGC4Q9Y5F7 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
PCDHGC4Q9Y5F7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PCDHGC4Q9Y5F7 RNU1-17P-201ENST00000363022 152 ntBASIC1.87□□□□□ -2.11
PCDHGC4Q9Y5F7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.87□□□□□ -2.11
PCDHGC4Q9Y5F7 RNA5SP182-201ENST00000516064 82 ntBASIC1.87□□□□□ -2.11
PCDHGC4Q9Y5F7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
PCDHGC4Q9Y5F7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
PCDHGC4Q9Y5F7 RNU6-382P-201ENST00000365181 106 ntBASIC1.86□□□□□ -2.11
PCDHGC4Q9Y5F7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
PCDHGC4Q9Y5F7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
PCDHGC4Q9Y5F7 U3.27-201ENST00000391237 200 ntBASIC1.86□□□□□ -2.11
PCDHGC4Q9Y5F7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.86□□□□□ -2.11
PCDHGC4Q9Y5F7 AL591704.2-201ENST00000421658 181 ntBASIC1.86□□□□□ -2.11
PCDHGC4Q9Y5F7 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
PCDHGC4Q9Y5F7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.86□□□□□ -2.11
PCDHGC4Q9Y5F7 RNU6-369P-201ENST00000362515 102 ntBASIC1.85□□□□□ -2.11
PCDHGC4Q9Y5F7 SNORA16.1-201ENST00000364597 132 ntBASIC1.85□□□□□ -2.11
PCDHGC4Q9Y5F7 Y_RNA.258-201ENST00000364613 105 ntBASIC1.85□□□□□ -2.11
PCDHGC4Q9Y5F7 Y_RNA.443-201ENST00000384135 111 ntBASIC1.85□□□□□ -2.11
PCDHGC4Q9Y5F7 RNU7-21P-201ENST00000459430 62 ntBASIC1.85□□□□□ -2.11
PCDHGC4Q9Y5F7 RNU6-274P-201ENST00000459566 107 ntBASIC1.85□□□□□ -2.11
PCDHGC4Q9Y5F7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
PCDHGC4Q9Y5F7 MIR4804-201ENST00000581683 73 ntBASIC1.85□□□□□ -2.11
PCDHGC4Q9Y5F7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.85□□□□□ -2.11
PCDHGC4Q9Y5F7 AL096840.1-201ENST00000603287 93 ntBASIC1.85□□□□□ -2.11
PCDHGC4Q9Y5F7 MIR6845-201ENST00000613182 61 ntBASIC1.85□□□□□ -2.11
PCDHGC4Q9Y5F7 SNORA25.4-201ENST00000363666 124 ntBASIC1.84□□□□□ -2.11
PCDHGC4Q9Y5F7 SNORD115-44-201ENST00000365391 82 ntBASIC1.84□□□□□ -2.11
PCDHGC4Q9Y5F7 MIR9-3-201ENST00000385084 90 ntBASIC1.84□□□□□ -2.11
PCDHGC4Q9Y5F7 RNU6-604P-201ENST00000390917 100 ntBASIC1.84□□□□□ -2.11
PCDHGC4Q9Y5F7 RNU6-994P-201ENST00000410507 111 ntBASIC1.84□□□□□ -2.11
PCDHGC4Q9Y5F7 RNU6-977P-201ENST00000516411 103 ntBASIC1.84□□□□□ -2.11
PCDHGC4Q9Y5F7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
PCDHGC4Q9Y5F7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
PCDHGC4Q9Y5F7 SNORD113.1-201ENST00000363280 73 ntBASIC1.83□□□□□ -2.12
PCDHGC4Q9Y5F7 MIR9-2-201ENST00000384838 87 ntBASIC1.83□□□□□ -2.12
PCDHGC4Q9Y5F7 RNU7-56P-201ENST00000458744 62 ntBASIC1.83□□□□□ -2.12
PCDHGC4Q9Y5F7 RNU7-13P-201ENST00000516413 62 ntBASIC1.83□□□□□ -2.12
PCDHGC4Q9Y5F7 RNA5SP364-201ENST00000516938 78 ntBASIC1.83□□□□□ -2.12
PCDHGC4Q9Y5F7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.83□□□□□ -2.12
PCDHGC4Q9Y5F7 MIR4498-201ENST00000577599 66 ntBASIC1.83□□□□□ -2.12
PCDHGC4Q9Y5F7 AL078603.1-201ENST00000603824 313 ntBASIC1.83□□□□□ -2.12
PCDHGC4Q9Y5F7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PCDHGC4Q9Y5F7 RNU6-1216P-201ENST00000362590 107 ntBASIC1.82□□□□□ -2.12
PCDHGC4Q9Y5F7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.82□□□□□ -2.12
PCDHGC4Q9Y5F7 RNU1-119P-201ENST00000391122 165 ntBASIC1.82□□□□□ -2.12
PCDHGC4Q9Y5F7 RNU1-78P-201ENST00000391248 165 ntBASIC1.82□□□□□ -2.12
PCDHGC4Q9Y5F7 RNA5SP489-201ENST00000410986 109 ntBASIC1.82□□□□□ -2.12
PCDHGC4Q9Y5F7 AL157834.3-201ENST00000615543 103 ntBASIC1.82□□□□□ -2.12
PCDHGC4Q9Y5F7 SNORA80D-201ENST00000384488 135 ntBASIC1.81□□□□□ -2.12
PCDHGC4Q9Y5F7 SNORD116-24-201ENST00000384549 92 ntBASIC1.81□□□□□ -2.12
PCDHGC4Q9Y5F7 MIR100-201ENST00000385259 80 ntBASIC1.81□□□□□ -2.12
PCDHGC4Q9Y5F7 RNU6-910P-201ENST00000390844 107 ntBASIC1.81□□□□□ -2.12
PCDHGC4Q9Y5F7 SUMO2P12-201ENST00000405924 140 ntBASIC1.81□□□□□ -2.12
PCDHGC4Q9Y5F7 MIR1287-201ENST00000408492 90 ntBASIC1.81□□□□□ -2.12
PCDHGC4Q9Y5F7 AC244098.3-201ENST00000424803 96 ntBASIC1.81□□□□□ -2.12
PCDHGC4Q9Y5F7 RNU6-752P-201ENST00000516376 102 ntBASIC1.81□□□□□ -2.12
PCDHGC4Q9Y5F7 SNORA31.14-201ENST00000516728 116 ntBASIC1.81□□□□□ -2.12
PCDHGC4Q9Y5F7 MIR4419B-201ENST00000577260 68 ntBASIC1.81□□□□□ -2.12
PCDHGC4Q9Y5F7 MIR3198-2-201ENST00000577868 80 ntBASIC1.81□□□□□ -2.12
PCDHGC4Q9Y5F7 MIR4781-201ENST00000585250 76 ntBASIC1.81□□□□□ -2.12
PCDHGC4Q9Y5F7 AC012493.3-201ENST00000604494 112 ntBASIC1.81□□□□□ -2.12
PCDHGC4Q9Y5F7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 228.7 ms