Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 RNU6-554P-201ENST00000410466 106 ntBASIC0.7□□□□□ -2.3
HDAC9Q9UKV0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.7□□□□□ -2.3
HDAC9Q9UKV0 RNU6-537P-201ENST00000517277 103 ntBASIC0.7□□□□□ -2.3
HDAC9Q9UKV0 RNU6-90P-201ENST00000606352 106 ntBASIC0.7□□□□□ -2.3
HDAC9Q9UKV0 AC243829.6-201ENST00000612652 106 ntBASIC0.7□□□□□ -2.3
HDAC9Q9UKV0 SNORD63B-201ENST00000411005 70 ntBASIC0.69□□□□□ -2.3
HDAC9Q9UKV0 SPINT5P-201ENST00000448174 155 ntBASIC0.69□□□□□ -2.3
HDAC9Q9UKV0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.69□□□□□ -2.3
HDAC9Q9UKV0 RNU6-919P-201ENST00000516731 104 ntBASIC0.69□□□□□ -2.3
HDAC9Q9UKV0 MIR4514-201ENST00000581410 57 ntBASIC0.69□□□□□ -2.3
HDAC9Q9UKV0 MIR4639-201ENST00000584938 69 ntBASIC0.69□□□□□ -2.3
HDAC9Q9UKV0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.69□□□□□ -2.3
HDAC9Q9UKV0 RNA5SP499-201ENST00000363982 119 ntBASIC0.68□□□□□ -2.3
HDAC9Q9UKV0 Y_RNA.342-201ENST00000365352 113 ntBASIC0.68□□□□□ -2.3
HDAC9Q9UKV0 SNORD28-201ENST00000384706 75 ntBASIC0.68□□□□□ -2.3
HDAC9Q9UKV0 SNORA19.1-201ENST00000410656 129 ntBASIC0.68□□□□□ -2.3
HDAC9Q9UKV0 AC097635.1-201ENST00000450678 155 ntBASIC0.68□□□□□ -2.3
HDAC9Q9UKV0 RNU4-54P-201ENST00000516428 129 ntBASIC0.68□□□□□ -2.3
HDAC9Q9UKV0 uc_338.28-201ENST00000612082 187 ntBASIC0.68□□□□□ -2.3
HDAC9Q9UKV0 SNORA36.1-201ENST00000363424 132 ntBASIC0.67□□□□□ -2.3
HDAC9Q9UKV0 Y_RNA.163-201ENST00000363702 113 ntBASIC0.67□□□□□ -2.3
HDAC9Q9UKV0 RNU6-44P-201ENST00000384045 107 ntBASIC0.67□□□□□ -2.3
HDAC9Q9UKV0 RNA5SP63-201ENST00000391225 112 ntBASIC0.67□□□□□ -2.3
HDAC9Q9UKV0 AL035461.1-201ENST00000421490 332 ntBASIC0.67□□□□□ -2.3
HDAC9Q9UKV0 RNU7-106P-201ENST00000459514 67 ntBASIC0.67□□□□□ -2.3
HDAC9Q9UKV0 RNU6-904P-201ENST00000516206 101 ntBASIC0.67□□□□□ -2.3
HDAC9Q9UKV0 RNA5SP47-201ENST00000517230 109 ntBASIC0.67□□□□□ -2.3
HDAC9Q9UKV0 AC141557.1-201ENST00000540982 400 ntBASIC0.67□□□□□ -2.3
HDAC9Q9UKV0 AC096720.1-201ENST00000604441 183 ntBASIC0.67□□□□□ -2.3
HDAC9Q9UKV0 uc_338.17-201ENST00000619633 179 ntBASIC0.67□□□□□ -2.3
HDAC9Q9UKV0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
HDAC9Q9UKV0 RNU6-1163P-201ENST00000364516 107 ntBASIC0.66□□□□□ -2.3
HDAC9Q9UKV0 RNA5SP517-201ENST00000364724 117 ntBASIC0.66□□□□□ -2.3
HDAC9Q9UKV0 RNU6-945P-201ENST00000383947 107 ntBASIC0.66□□□□□ -2.3
HDAC9Q9UKV0 Y_RNA.567-201ENST00000384736 106 ntBASIC0.66□□□□□ -2.3
HDAC9Q9UKV0 RNU7-195P-201ENST00000458793 62 ntBASIC0.66□□□□□ -2.3
HDAC9Q9UKV0 MIR6828-201ENST00000636181 60 ntBASIC0.66□□□□□ -2.3
HDAC9Q9UKV0 SNORA63.4-201ENST00000362763 126 ntBASIC0.65□□□□□ -2.31
HDAC9Q9UKV0 Y_RNA.78-201ENST00000362970 110 ntBASIC0.65□□□□□ -2.31
HDAC9Q9UKV0 RNU6-1229P-201ENST00000364295 107 ntBASIC0.65□□□□□ -2.31
HDAC9Q9UKV0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.65□□□□□ -2.31
HDAC9Q9UKV0 MIR599-201ENST00000385069 95 ntBASIC0.65□□□□□ -2.31
HDAC9Q9UKV0 SCARNA16.5-201ENST00000517114 183 ntBASIC0.65□□□□□ -2.31
HDAC9Q9UKV0 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.65□□□□□ -2.31
HDAC9Q9UKV0 AC092634.7-201ENST00000621022 103 ntBASIC0.65□□□□□ -2.31
HDAC9Q9UKV0 AC244669.1-204ENST00000621564 178 ntBASIC0.65□□□□□ -2.31
HDAC9Q9UKV0 AC091304.10-201ENST00000641554 121 ntBASIC0.65□□□□□ -2.31
HDAC9Q9UKV0 SNORD115-24-201ENST00000363528 82 ntBASIC0.64□□□□□ -2.31
HDAC9Q9UKV0 MIR516A2-201ENST00000384888 90 ntBASIC0.64□□□□□ -2.31
HDAC9Q9UKV0 MIR516A1-201ENST00000385033 90 ntBASIC0.64□□□□□ -2.31
HDAC9Q9UKV0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.63□□□□□ -2.31
HDAC9Q9UKV0 RNU6-1260P-201ENST00000362944 107 ntBASIC0.63□□□□□ -2.31
HDAC9Q9UKV0 MIR590-201ENST00000385008 97 ntBASIC0.63□□□□□ -2.31
HDAC9Q9UKV0 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
HDAC9Q9UKV0 Y_RNA.659-201ENST00000515994 113 ntBASIC0.63□□□□□ -2.31
HDAC9Q9UKV0 Y_RNA.809-201ENST00000516058 95 ntBASIC0.63□□□□□ -2.31
HDAC9Q9UKV0 RN7SKP12-201ENST00000516275 143 ntBASIC0.63□□□□□ -2.31
HDAC9Q9UKV0 RNU7-161P-201ENST00000517289 62 ntBASIC0.63□□□□□ -2.31
HDAC9Q9UKV0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.63□□□□□ -2.31
HDAC9Q9UKV0 Y_RNA.57-201ENST00000362806 113 ntBASIC0.62□□□□□ -2.31
HDAC9Q9UKV0 RNA5SP403-201ENST00000363598 108 ntBASIC0.62□□□□□ -2.31
HDAC9Q9UKV0 RNU4-36P-201ENST00000364294 144 ntBASIC0.62□□□□□ -2.31
HDAC9Q9UKV0 SNORA8.2-201ENST00000384372 139 ntBASIC0.62□□□□□ -2.31
HDAC9Q9UKV0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.62□□□□□ -2.31
HDAC9Q9UKV0 MIR1302-5-201ENST00000408164 150 ntBASIC0.62□□□□□ -2.31
HDAC9Q9UKV0 MIR1265-201ENST00000408444 86 ntBASIC0.62□□□□□ -2.31
HDAC9Q9UKV0 AC114737.2-201ENST00000421583 173 ntBASIC0.62□□□□□ -2.31
HDAC9Q9UKV0 AC109327.2-201ENST00000448339 378 ntBASIC0.62□□□□□ -2.31
HDAC9Q9UKV0 MIR4777-201ENST00000583710 86 ntBASIC0.62□□□□□ -2.31
HDAC9Q9UKV0 MIR548Z-201ENST00000584743 97 ntBASIC0.62□□□□□ -2.31
HDAC9Q9UKV0 Y_RNA.10-201ENST00000362371 110 ntBASIC0.61□□□□□ -2.31
HDAC9Q9UKV0 RNU6-766P-201ENST00000362478 107 ntBASIC0.61□□□□□ -2.31
HDAC9Q9UKV0 RNU6-1244P-201ENST00000363614 108 ntBASIC0.61□□□□□ -2.31
HDAC9Q9UKV0 SNORD45B-201ENST00000364617 72 ntBASIC0.61□□□□□ -2.31
HDAC9Q9UKV0 Y_RNA.601-201ENST00000410500 113 ntBASIC0.61□□□□□ -2.31
HDAC9Q9UKV0 RNA5SP268-201ENST00000516828 124 ntBASIC0.61□□□□□ -2.31
HDAC9Q9UKV0 MIR4439-201ENST00000583746 80 ntBASIC0.61□□□□□ -2.31
HDAC9Q9UKV0 AC012531.4-201ENST00000616509 177 ntBASIC0.61□□□□□ -2.31
HDAC9Q9UKV0 AL627230.5-201ENST00000619807 58 ntBASIC0.61□□□□□ -2.31
HDAC9Q9UKV0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
HDAC9Q9UKV0 MIR450A1-201ENST00000362262 91 ntBASIC0.6□□□□□ -2.31
HDAC9Q9UKV0 SNORD36A-201ENST00000362874 73 ntBASIC0.6□□□□□ -2.31
HDAC9Q9UKV0 Y_RNA.81-201ENST00000362997 102 ntBASIC0.6□□□□□ -2.31
HDAC9Q9UKV0 RNU6-147P-201ENST00000383983 107 ntBASIC0.6□□□□□ -2.31
HDAC9Q9UKV0 RNU6-756P-201ENST00000383997 107 ntBASIC0.6□□□□□ -2.31
HDAC9Q9UKV0 RNU6-1254P-201ENST00000391266 104 ntBASIC0.6□□□□□ -2.31
HDAC9Q9UKV0 Y_RNA.95-201ENST00000363079 95 ntBASIC0.59□□□□□ -2.31
HDAC9Q9UKV0 SNORD118-201ENST00000363593 134 ntBASIC0.59□□□□□ -2.31
HDAC9Q9UKV0 Y_RNA.221-201ENST00000364248 96 ntBASIC0.59□□□□□ -2.31
HDAC9Q9UKV0 SNORA51.5-201ENST00000384126 131 ntBASIC0.59□□□□□ -2.31
HDAC9Q9UKV0 MIR518A1-201ENST00000385068 85 ntBASIC0.59□□□□□ -2.31
HDAC9Q9UKV0 SNORA40.8-201ENST00000411034 126 ntBASIC0.59□□□□□ -2.31
HDAC9Q9UKV0 SNORD71-201ENST00000411292 86 ntBASIC0.59□□□□□ -2.31
HDAC9Q9UKV0 RNU6-109P-201ENST00000516364 107 ntBASIC0.59□□□□□ -2.31
HDAC9Q9UKV0 RNU6-184P-201ENST00000516514 107 ntBASIC0.59□□□□□ -2.31
HDAC9Q9UKV0 SNORA25.18-201ENST00000607153 114 ntBASIC0.59□□□□□ -2.31
HDAC9Q9UKV0 RNU6-153P-201ENST00000364422 104 ntBASIC0.58□□□□□ -2.32
HDAC9Q9UKV0 Y_RNA.467-201ENST00000384297 102 ntBASIC0.58□□□□□ -2.32
HDAC9Q9UKV0 AL031737.1-201ENST00000450125 223 ntBASIC0.58□□□□□ -2.32
HDAC9Q9UKV0 SCARNA23-201ENST00000516060 130 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms