Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.18□□□□□ -2.22
UBP1Q9NZI7 MIR499A-201ENST00000384903 122 ntBASIC1.18□□□□□ -2.22
UBP1Q9NZI7 RNU6-762P-201ENST00000517107 102 ntBASIC1.18□□□□□ -2.22
UBP1Q9NZI7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.18□□□□□ -2.22
UBP1Q9NZI7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
UBP1Q9NZI7 SNORD115-24-201ENST00000363528 82 ntBASIC1.17□□□□□ -2.22
UBP1Q9NZI7 RNY1P1-201ENST00000364372 112 ntBASIC1.17□□□□□ -2.22
UBP1Q9NZI7 RNU6-75P-201ENST00000515944 104 ntBASIC1.17□□□□□ -2.22
UBP1Q9NZI7 RNU6-1265P-201ENST00000516342 103 ntBASIC1.17□□□□□ -2.22
UBP1Q9NZI7 AC011195.1-201ENST00000578177 177 ntBASIC1.17□□□□□ -2.22
UBP1Q9NZI7 MIR4639-201ENST00000584938 69 ntBASIC1.17□□□□□ -2.22
UBP1Q9NZI7 AL353765.1-201ENST00000605514 183 ntBASIC1.17□□□□□ -2.22
UBP1Q9NZI7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
UBP1Q9NZI7 AC244098.3-201ENST00000424803 96 ntBASIC1.16□□□□□ -2.22
UBP1Q9NZI7 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
UBP1Q9NZI7 RNU6-509P-201ENST00000363519 107 ntBASIC1.15□□□□□ -2.23
UBP1Q9NZI7 Y_RNA.221-201ENST00000364248 96 ntBASIC1.15□□□□□ -2.23
UBP1Q9NZI7 RNU6-1229P-201ENST00000364295 107 ntBASIC1.15□□□□□ -2.23
UBP1Q9NZI7 MIR519C-201ENST00000385053 87 ntBASIC1.15□□□□□ -2.23
UBP1Q9NZI7 MIR644A-201ENST00000385262 94 ntBASIC1.15□□□□□ -2.23
UBP1Q9NZI7 MIR548U-201ENST00000390728 81 ntBASIC1.15□□□□□ -2.23
UBP1Q9NZI7 SNORA26.2-201ENST00000390922 122 ntBASIC1.15□□□□□ -2.23
UBP1Q9NZI7 MIR1236-201ENST00000408340 102 ntBASIC1.15□□□□□ -2.23
UBP1Q9NZI7 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.15□□□□□ -2.23
UBP1Q9NZI7 RN7SKP12-201ENST00000516275 143 ntBASIC1.15□□□□□ -2.23
UBP1Q9NZI7 SNORA72.7-201ENST00000516349 94 ntBASIC1.15□□□□□ -2.23
UBP1Q9NZI7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
UBP1Q9NZI7 RNA5SP403-201ENST00000363598 108 ntBASIC1.14□□□□□ -2.23
UBP1Q9NZI7 SNORD115-44-201ENST00000365391 82 ntBASIC1.14□□□□□ -2.23
UBP1Q9NZI7 OR2A41P-201ENST00000473586 105 ntBASIC1.14□□□□□ -2.23
UBP1Q9NZI7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.14□□□□□ -2.23
UBP1Q9NZI7 RNU6-497P-201ENST00000365316 104 ntBASIC1.13□□□□□ -2.23
UBP1Q9NZI7 RNU6-811P-201ENST00000384069 107 ntBASIC1.13□□□□□ -2.23
UBP1Q9NZI7 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
UBP1Q9NZI7 Y_RNA.596-201ENST00000410462 109 ntBASIC1.13□□□□□ -2.23
UBP1Q9NZI7 RNU6-267P-201ENST00000516714 103 ntBASIC1.13□□□□□ -2.23
UBP1Q9NZI7 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.13□□□□□ -2.23
UBP1Q9NZI7 MIR3678-201ENST00000578455 94 ntBASIC1.13□□□□□ -2.23
UBP1Q9NZI7 MIR7111-201ENST00000619751 72 ntBASIC1.13□□□□□ -2.23
UBP1Q9NZI7 MIR494-201ENST00000349529 81 ntBASIC1.12□□□□□ -2.23
UBP1Q9NZI7 MIR18A-201ENST00000362310 71 ntBASIC1.12□□□□□ -2.23
UBP1Q9NZI7 RNU6-392P-201ENST00000364926 101 ntBASIC1.12□□□□□ -2.23
UBP1Q9NZI7 SNORD28-201ENST00000384706 75 ntBASIC1.12□□□□□ -2.23
UBP1Q9NZI7 RNY4P29-201ENST00000410801 97 ntBASIC1.12□□□□□ -2.23
UBP1Q9NZI7 AL606490.4-201ENST00000423117 127 ntBASIC1.12□□□□□ -2.23
UBP1Q9NZI7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.12□□□□□ -2.23
UBP1Q9NZI7 MTRNR2L2-201ENST00000604882 87 ntBASIC1.12□□□□□ -2.23
UBP1Q9NZI7 AC062037.1-201ENST00000605302 128 ntBASIC1.12□□□□□ -2.23
UBP1Q9NZI7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.12□□□□□ -2.23
UBP1Q9NZI7 RNU4-32P-201ENST00000363404 141 ntBASIC1.11□□□□□ -2.23
UBP1Q9NZI7 SNORD18A-201ENST00000363753 72 ntBASIC1.11□□□□□ -2.23
UBP1Q9NZI7 SNORD114-27-201ENST00000363766 70 ntBASIC1.11□□□□□ -2.23
UBP1Q9NZI7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.11□□□□□ -2.23
UBP1Q9NZI7 RNA5SP102-201ENST00000516865 106 ntBASIC1.11□□□□□ -2.23
UBP1Q9NZI7 SNORD115-37-201ENST00000363768 82 ntBASIC1.1□□□□□ -2.23
UBP1Q9NZI7 SNORD101-201ENST00000384027 73 ntBASIC1.1□□□□□ -2.23
UBP1Q9NZI7 Y_RNA.508-201ENST00000384502 114 ntBASIC1.1□□□□□ -2.23
UBP1Q9NZI7 MIR518E-201ENST00000385252 88 ntBASIC1.1□□□□□ -2.23
UBP1Q9NZI7 RNU7-13P-201ENST00000516413 62 ntBASIC1.1□□□□□ -2.23
UBP1Q9NZI7 RNU7-161P-201ENST00000517289 62 ntBASIC1.1□□□□□ -2.23
UBP1Q9NZI7 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.1□□□□□ -2.23
UBP1Q9NZI7 U6.100-201ENST00000636230 99 ntBASIC1.1□□□□□ -2.23
UBP1Q9NZI7 RNU6-664P-201ENST00000362381 107 ntBASIC1.09□□□□□ -2.23
UBP1Q9NZI7 Y_RNA.239-201ENST00000364444 113 ntBASIC1.09□□□□□ -2.23
UBP1Q9NZI7 MIR608-201ENST00000384820 100 ntBASIC1.09□□□□□ -2.23
UBP1Q9NZI7 MIR1276-201ENST00000408707 83 ntBASIC1.09□□□□□ -2.23
UBP1Q9NZI7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.09□□□□□ -2.23
UBP1Q9NZI7 MIR3064-201ENST00000581130 66 ntBASIC1.09□□□□□ -2.23
UBP1Q9NZI7 AC104996.3-201ENST00000590718 94 ntBASIC1.09□□□□□ -2.23
UBP1Q9NZI7 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
UBP1Q9NZI7 AC244669.1-204ENST00000621564 178 ntBASIC1.09□□□□□ -2.23
UBP1Q9NZI7 AC067863.3-201ENST00000624172 122 ntBASIC1.09□□□□□ -2.23
UBP1Q9NZI7 MIR548BB-201ENST00000626714 66 ntBASIC1.09□□□□□ -2.23
UBP1Q9NZI7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
UBP1Q9NZI7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
UBP1Q9NZI7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.08□□□□□ -2.24
UBP1Q9NZI7 SNORD115-27-201ENST00000364430 82 ntBASIC1.08□□□□□ -2.24
UBP1Q9NZI7 Y_RNA.355-201ENST00000365462 98 ntBASIC1.08□□□□□ -2.24
UBP1Q9NZI7 RNU6-242P-201ENST00000384359 107 ntBASIC1.08□□□□□ -2.24
UBP1Q9NZI7 RNA5SP47-201ENST00000517230 109 ntBASIC1.08□□□□□ -2.24
UBP1Q9NZI7 MIR5588-201ENST00000581890 63 ntBASIC1.08□□□□□ -2.24
UBP1Q9NZI7 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
UBP1Q9NZI7 Y_RNA.426-201ENST00000384068 113 ntBASIC1.07□□□□□ -2.24
UBP1Q9NZI7 RNU6-1152P-201ENST00000384576 107 ntBASIC1.07□□□□□ -2.24
UBP1Q9NZI7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
UBP1Q9NZI7 Y_RNA.611-201ENST00000410682 108 ntBASIC1.07□□□□□ -2.24
UBP1Q9NZI7 RNU7-104P-201ENST00000459398 79 ntBASIC1.07□□□□□ -2.24
UBP1Q9NZI7 AC022137.1-201ENST00000483735 151 ntBASIC1.07□□□□□ -2.24
UBP1Q9NZI7 AC093729.1-201ENST00000513074 128 ntBASIC1.07□□□□□ -2.24
UBP1Q9NZI7 MIR4696-201ENST00000581431 70 ntBASIC1.07□□□□□ -2.24
UBP1Q9NZI7 AL078603.1-201ENST00000603824 313 ntBASIC1.07□□□□□ -2.24
UBP1Q9NZI7 MIR6504-201ENST00000613520 61 ntBASIC1.07□□□□□ -2.24
UBP1Q9NZI7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
UBP1Q9NZI7 RNU6-132P-201ENST00000383863 107 ntBASIC1.06□□□□□ -2.24
UBP1Q9NZI7 Y_RNA.491-201ENST00000384417 107 ntBASIC1.06□□□□□ -2.24
UBP1Q9NZI7 RNA5SP222-201ENST00000411039 105 ntBASIC1.06□□□□□ -2.24
UBP1Q9NZI7 AC087343.1-201ENST00000477341 475 ntBASIC1.06□□□□□ -2.24
UBP1Q9NZI7 SCARNA16.5-201ENST00000517114 183 ntBASIC1.06□□□□□ -2.24
UBP1Q9NZI7 MIR4452-201ENST00000583004 71 ntBASIC1.06□□□□□ -2.24
UBP1Q9NZI7 MIR6734-201ENST00000621166 68 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms