Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 MIR617-201ENST00000385030 97 ntBASIC2.12□□□□□ -2.07
PRDM9Q9NQV7 AL591704.2-201ENST00000421658 181 ntBASIC2.12□□□□□ -2.07
PRDM9Q9NQV7 MIR3198-2-201ENST00000577868 80 ntBASIC2.12□□□□□ -2.07
PRDM9Q9NQV7 MIR4804-201ENST00000581683 73 ntBASIC2.12□□□□□ -2.07
PRDM9Q9NQV7 MIR6132-201ENST00000622083 109 ntBASIC2.12□□□□□ -2.07
PRDM9Q9NQV7 MIRLET7G-201ENST00000362280 84 ntBASIC2.11□□□□□ -2.07
PRDM9Q9NQV7 RNU6-369P-201ENST00000362515 102 ntBASIC2.11□□□□□ -2.07
PRDM9Q9NQV7 SNORA3.2-201ENST00000408221 125 ntBASIC2.11□□□□□ -2.07
PRDM9Q9NQV7 RNA5SP425-201ENST00000410336 112 ntBASIC2.11□□□□□ -2.07
PRDM9Q9NQV7 SNORA31.2-201ENST00000516019 134 ntBASIC2.11□□□□□ -2.07
PRDM9Q9NQV7 MIR548AG2-201ENST00000581228 64 ntBASIC2.11□□□□□ -2.07
PRDM9Q9NQV7 MIR6509-201ENST00000614603 85 ntBASIC2.11□□□□□ -2.07
PRDM9Q9NQV7 MIR548O2-201ENST00000616090 70 ntBASIC2.11□□□□□ -2.07
PRDM9Q9NQV7 uc_338.16-201ENST00000621804 95 ntBASIC2.11□□□□□ -2.07
PRDM9Q9NQV7 MIR7-2-201ENST00000384970 110 ntBASIC2.1□□□□□ -2.07
PRDM9Q9NQV7 MIR221-201ENST00000385135 110 ntBASIC2.1□□□□□ -2.07
PRDM9Q9NQV7 RNU1-119P-201ENST00000391122 165 ntBASIC2.1□□□□□ -2.07
PRDM9Q9NQV7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.1□□□□□ -2.07
PRDM9Q9NQV7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.1□□□□□ -2.07
PRDM9Q9NQV7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PRDM9Q9NQV7 Y_RNA.32-201ENST00000362589 110 ntBASIC2.09□□□□□ -2.07
PRDM9Q9NQV7 SNORD115-24-201ENST00000363528 82 ntBASIC2.09□□□□□ -2.07
PRDM9Q9NQV7 RNU6-994P-201ENST00000410507 111 ntBASIC2.09□□□□□ -2.07
PRDM9Q9NQV7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.09□□□□□ -2.07
PRDM9Q9NQV7 RNU7-21P-201ENST00000459430 62 ntBASIC2.09□□□□□ -2.07
PRDM9Q9NQV7 RN7SKP88-201ENST00000516847 250 ntBASIC2.09□□□□□ -2.07
PRDM9Q9NQV7 MIR1273D-201ENST00000577266 86 ntBASIC2.09□□□□□ -2.07
PRDM9Q9NQV7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.09□□□□□ -2.07
PRDM9Q9NQV7 7SK.8-201ENST00000612110 250 ntBASIC2.09□□□□□ -2.07
PRDM9Q9NQV7 7SK.11-201ENST00000615477 250 ntBASIC2.09□□□□□ -2.07
PRDM9Q9NQV7 7SK.13-201ENST00000622040 250 ntBASIC2.09□□□□□ -2.07
PRDM9Q9NQV7 MIR6873-201ENST00000622788 63 ntBASIC2.09□□□□□ -2.07
PRDM9Q9NQV7 RNA5SP432-201ENST00000362480 116 ntBASIC2.08□□□□□ -2.08
PRDM9Q9NQV7 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
PRDM9Q9NQV7 MIR17-201ENST00000385012 84 ntBASIC2.08□□□□□ -2.08
PRDM9Q9NQV7 RNU7-56P-201ENST00000458744 62 ntBASIC2.08□□□□□ -2.08
PRDM9Q9NQV7 AC104435.1-201ENST00000483483 166 ntBASIC2.08□□□□□ -2.08
PRDM9Q9NQV7 SNORA31.14-201ENST00000516728 116 ntBASIC2.08□□□□□ -2.08
PRDM9Q9NQV7 AC023827.1-201ENST00000569247 97 ntBASIC2.08□□□□□ -2.08
PRDM9Q9NQV7 ZNF355P-201ENST00000427301 3216 ntBASIC2.08□□□□□ -2.08
PRDM9Q9NQV7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PRDM9Q9NQV7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PRDM9Q9NQV7 Y_RNA.363-201ENST00000365529 113 ntBASIC2.07□□□□□ -2.08
PRDM9Q9NQV7 SNORA80D-201ENST00000384488 135 ntBASIC2.07□□□□□ -2.08
PRDM9Q9NQV7 RNU7-161P-201ENST00000517289 62 ntBASIC2.07□□□□□ -2.08
PRDM9Q9NQV7 MIR4448-201ENST00000584360 86 ntBASIC2.07□□□□□ -2.08
PRDM9Q9NQV7 AC092634.7-201ENST00000621022 103 ntBASIC2.07□□□□□ -2.08
PRDM9Q9NQV7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PRDM9Q9NQV7 RNU6-940P-201ENST00000363433 104 ntBASIC2.06□□□□□ -2.08
PRDM9Q9NQV7 SNORA25.5-201ENST00000363782 126 ntBASIC2.06□□□□□ -2.08
PRDM9Q9NQV7 RN7SKP223-201ENST00000410582 62 ntBASIC2.06□□□□□ -2.08
PRDM9Q9NQV7 RNU7-90P-201ENST00000459216 62 ntBASIC2.06□□□□□ -2.08
PRDM9Q9NQV7 NAMPTP3-201ENST00000569273 224 ntBASIC2.06□□□□□ -2.08
PRDM9Q9NQV7 AP000553.5-201ENST00000641933 54 ntBASIC2.06□□□□□ -2.08
PRDM9Q9NQV7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
PRDM9Q9NQV7 RNU6-829P-201ENST00000363700 112 ntBASIC2.05□□□□□ -2.08
PRDM9Q9NQV7 RNA5SP37-201ENST00000365420 130 ntBASIC2.05□□□□□ -2.08
PRDM9Q9NQV7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PRDM9Q9NQV7 RNU7-74P-201ENST00000459104 62 ntBASIC2.05□□□□□ -2.08
PRDM9Q9NQV7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.05□□□□□ -2.08
PRDM9Q9NQV7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
PRDM9Q9NQV7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PRDM9Q9NQV7 SCARNA21.1-201ENST00000515996 128 ntBASIC2.04□□□□□ -2.08
PRDM9Q9NQV7 RNU6-135P-201ENST00000516769 101 ntBASIC2.04□□□□□ -2.08
PRDM9Q9NQV7 MIR3657-201ENST00000584818 117 ntBASIC2.04□□□□□ -2.08
PRDM9Q9NQV7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PRDM9Q9NQV7 Y_RNA.236-201ENST00000364427 111 ntBASIC2.03□□□□□ -2.08
PRDM9Q9NQV7 RNU6-1335P-201ENST00000365426 107 ntBASIC2.03□□□□□ -2.08
PRDM9Q9NQV7 MIR519E-201ENST00000385075 84 ntBASIC2.03□□□□□ -2.08
PRDM9Q9NQV7 MIR100-201ENST00000385259 80 ntBASIC2.03□□□□□ -2.08
PRDM9Q9NQV7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.03□□□□□ -2.08
PRDM9Q9NQV7 AC067940.1-201ENST00000458411 300 ntBASIC2.03□□□□□ -2.08
PRDM9Q9NQV7 RNA5SP233-201ENST00000459153 113 ntBASIC2.03□□□□□ -2.08
PRDM9Q9NQV7 RNU7-104P-201ENST00000459398 79 ntBASIC2.03□□□□□ -2.08
PRDM9Q9NQV7 MIR4422-201ENST00000581938 83 ntBASIC2.03□□□□□ -2.08
PRDM9Q9NQV7 SNORA2.1-201ENST00000363089 137 ntBASIC2.02□□□□□ -2.09
PRDM9Q9NQV7 RNU6-645P-201ENST00000364649 106 ntBASIC2.02□□□□□ -2.09
PRDM9Q9NQV7 RNU1-78P-201ENST00000391248 165 ntBASIC2.02□□□□□ -2.09
PRDM9Q9NQV7 MIR5002-201ENST00000584713 97 ntBASIC2.02□□□□□ -2.09
PRDM9Q9NQV7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
PRDM9Q9NQV7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.01□□□□□ -2.09
PRDM9Q9NQV7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
PRDM9Q9NQV7 MIR1-1-201ENST00000362147 71 ntBASIC2.01□□□□□ -2.09
PRDM9Q9NQV7 RNA5SP215-201ENST00000363440 122 ntBASIC2.01□□□□□ -2.09
PRDM9Q9NQV7 RNU6-54P-201ENST00000365563 107 ntBASIC2.01□□□□□ -2.09
PRDM9Q9NQV7 snoU13.26-201ENST00000459452 105 ntBASIC2.01□□□□□ -2.09
PRDM9Q9NQV7 RNU6-237P-201ENST00000515985 71 ntBASIC2.01□□□□□ -2.09
PRDM9Q9NQV7 MIR4648-201ENST00000580107 72 ntBASIC2.01□□□□□ -2.09
PRDM9Q9NQV7 AC067863.3-201ENST00000624172 122 ntBASIC2.01□□□□□ -2.09
PRDM9Q9NQV7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PRDM9Q9NQV7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PRDM9Q9NQV7 MIR520F-201ENST00000384824 87 ntBASIC2□□□□□ -2.09
PRDM9Q9NQV7 MIR504-201ENST00000385065 83 ntBASIC2□□□□□ -2.09
PRDM9Q9NQV7 MIR1827-201ENST00000408549 66 ntBASIC2□□□□□ -2.09
PRDM9Q9NQV7 RNU1-123P-201ENST00000458950 160 ntBASIC2□□□□□ -2.09
PRDM9Q9NQV7 SNORD79.1-201ENST00000516069 84 ntBASIC2□□□□□ -2.09
PRDM9Q9NQV7 AL157834.3-201ENST00000615543 103 ntBASIC2□□□□□ -2.09
PRDM9Q9NQV7 MIR219B-201ENST00000637023 88 ntBASIC2□□□□□ -2.09
PRDM9Q9NQV7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PRDM9Q9NQV7 SNORA64-201ENST00000384674 134 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 249.8 ms