Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.51□□□□□ -2.17
SSU72Q9NP77 MIR520F-201ENST00000384824 87 ntBASIC1.5□□□□□ -2.17
SSU72Q9NP77 SNORA40.18-201ENST00000391200 128 ntBASIC1.5□□□□□ -2.17
SSU72Q9NP77 AC073261.1-201ENST00000429409 121 ntBASIC1.5□□□□□ -2.17
SSU72Q9NP77 MIR4484-201ENST00000582855 83 ntBASIC1.5□□□□□ -2.17
SSU72Q9NP77 MIR7974-201ENST00000615835 79 ntBASIC1.5□□□□□ -2.17
SSU72Q9NP77 MIR7843-201ENST00000622274 79 ntBASIC1.5□□□□□ -2.17
SSU72Q9NP77 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.5□□□□□ -2.17
SSU72Q9NP77 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
SSU72Q9NP77 ZNF209P-201ENST00000593450 2304 ntBASIC1.5□□□□□ -2.17
SSU72Q9NP77 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SSU72Q9NP77 Y_RNA.264-201ENST00000364665 102 ntBASIC1.49□□□□□ -2.17
SSU72Q9NP77 MIR1304-201ENST00000408243 91 ntBASIC1.49□□□□□ -2.17
SSU72Q9NP77 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.49□□□□□ -2.17
SSU72Q9NP77 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.49□□□□□ -2.17
SSU72Q9NP77 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SSU72Q9NP77 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
SSU72Q9NP77 SNORA25-201ENST00000384384 134 ntBASIC1.48□□□□□ -2.17
SSU72Q9NP77 MIR3124-201ENST00000582636 67 ntBASIC1.48□□□□□ -2.17
SSU72Q9NP77 Y_RNA.12-201ENST00000362393 112 ntBASIC1.47□□□□□ -2.17
SSU72Q9NP77 RNA5SP403-201ENST00000363598 108 ntBASIC1.47□□□□□ -2.17
SSU72Q9NP77 Y_RNA.545-201ENST00000384652 105 ntBASIC1.47□□□□□ -2.17
SSU72Q9NP77 MIR517C-201ENST00000385103 95 ntBASIC1.47□□□□□ -2.17
SSU72Q9NP77 RNU6-287P-201ENST00000516230 98 ntBASIC1.47□□□□□ -2.17
SSU72Q9NP77 RNU6-303P-201ENST00000517091 106 ntBASIC1.47□□□□□ -2.17
SSU72Q9NP77 YWHAEP2-201ENST00000580066 112 ntBASIC1.47□□□□□ -2.17
SSU72Q9NP77 YWHAEP3-201ENST00000582767 121 ntBASIC1.47□□□□□ -2.17
SSU72Q9NP77 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
SSU72Q9NP77 RNU6-935P-201ENST00000410371 100 ntBASIC1.46□□□□□ -2.18
SSU72Q9NP77 RNU6-1052P-201ENST00000411398 104 ntBASIC1.46□□□□□ -2.18
SSU72Q9NP77 RNA5SP61-201ENST00000516453 100 ntBASIC1.46□□□□□ -2.18
SSU72Q9NP77 RNU6-719P-201ENST00000516671 104 ntBASIC1.46□□□□□ -2.18
SSU72Q9NP77 RNU7-161P-201ENST00000517289 62 ntBASIC1.46□□□□□ -2.18
SSU72Q9NP77 MIR4524B-201ENST00000581569 115 ntBASIC1.46□□□□□ -2.18
SSU72Q9NP77 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.46□□□□□ -2.18
SSU72Q9NP77 MIR664A-201ENST00000626086 82 ntBASIC1.46□□□□□ -2.18
SSU72Q9NP77 RNU6-380P-201ENST00000410207 107 ntBASIC1.45□□□□□ -2.18
SSU72Q9NP77 snoU13.23-201ENST00000458863 104 ntBASIC1.45□□□□□ -2.18
SSU72Q9NP77 MIR2113-201ENST00000459007 91 ntBASIC1.45□□□□□ -2.18
SSU72Q9NP77 MIR548AG2-201ENST00000581228 64 ntBASIC1.45□□□□□ -2.18
SSU72Q9NP77 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SSU72Q9NP77 RNU6-330P-201ENST00000363015 107 ntBASIC1.44□□□□□ -2.18
SSU72Q9NP77 MIR451A-201ENST00000385059 72 ntBASIC1.44□□□□□ -2.18
SSU72Q9NP77 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SSU72Q9NP77 AC108210.2-201ENST00000503681 201 ntBASIC1.44□□□□□ -2.18
SSU72Q9NP77 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.44□□□□□ -2.18
SSU72Q9NP77 MIR8081-201ENST00000611533 95 ntBASIC1.44□□□□□ -2.18
SSU72Q9NP77 MIR1297-201ENST00000637311 77 ntBASIC1.44□□□□□ -2.18
SSU72Q9NP77 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SSU72Q9NP77 AC002350.1-201ENST00000490759 375 ntBASIC1.43□□□□□ -2.18
SSU72Q9NP77 RNU6-548P-201ENST00000517083 115 ntBASIC1.43□□□□□ -2.18
SSU72Q9NP77 MIR3920-201ENST00000581751 86 ntBASIC1.43□□□□□ -2.18
SSU72Q9NP77 RNU5F-1-201ENST00000362507 117 ntBASIC1.42□□□□□ -2.18
SSU72Q9NP77 SNORD115-24-201ENST00000363528 82 ntBASIC1.42□□□□□ -2.18
SSU72Q9NP77 RNU6-824P-201ENST00000363724 104 ntBASIC1.42□□□□□ -2.18
SSU72Q9NP77 Y_RNA.174-201ENST00000363781 105 ntBASIC1.42□□□□□ -2.18
SSU72Q9NP77 RNU6-340P-201ENST00000364005 107 ntBASIC1.42□□□□□ -2.18
SSU72Q9NP77 MIR19B1-201ENST00000384829 87 ntBASIC1.42□□□□□ -2.18
SSU72Q9NP77 MIR222-201ENST00000384992 110 ntBASIC1.42□□□□□ -2.18
SSU72Q9NP77 MIR758-201ENST00000390227 88 ntBASIC1.42□□□□□ -2.18
SSU72Q9NP77 MIR1323-201ENST00000408090 73 ntBASIC1.42□□□□□ -2.18
SSU72Q9NP77 AC067940.1-201ENST00000458411 300 ntBASIC1.42□□□□□ -2.18
SSU72Q9NP77 RNU6-237P-201ENST00000515985 71 ntBASIC1.42□□□□□ -2.18
SSU72Q9NP77 RNU6-687P-201ENST00000516443 89 ntBASIC1.42□□□□□ -2.18
SSU72Q9NP77 RNU6-807P-201ENST00000516805 107 ntBASIC1.42□□□□□ -2.18
SSU72Q9NP77 RNU6-1015P-201ENST00000517121 99 ntBASIC1.42□□□□□ -2.18
SSU72Q9NP77 RNY4P3-201ENST00000365254 95 ntBASIC1.41□□□□□ -2.18
SSU72Q9NP77 Y_RNA.606-201ENST00000410579 103 ntBASIC1.41□□□□□ -2.18
SSU72Q9NP77 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
SSU72Q9NP77 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.41□□□□□ -2.18
SSU72Q9NP77 MIR6845-201ENST00000613182 61 ntBASIC1.41□□□□□ -2.18
SSU72Q9NP77 Y_RNA.36-201ENST00000362602 112 ntBASIC1.4□□□□□ -2.19
SSU72Q9NP77 Y_RNA.371-201ENST00000365591 113 ntBASIC1.4□□□□□ -2.19
SSU72Q9NP77 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
SSU72Q9NP77 RNU6-154P-201ENST00000384306 106 ntBASIC1.4□□□□□ -2.19
SSU72Q9NP77 RNU6-411P-201ENST00000384451 107 ntBASIC1.4□□□□□ -2.19
SSU72Q9NP77 MIR644A-201ENST00000385262 94 ntBASIC1.4□□□□□ -2.19
SSU72Q9NP77 SNORD89-201ENST00000390981 114 ntBASIC1.4□□□□□ -2.19
SSU72Q9NP77 RNU6-482P-201ENST00000391068 107 ntBASIC1.4□□□□□ -2.19
SSU72Q9NP77 AL591806.2-201ENST00000433122 173 ntBASIC1.4□□□□□ -2.19
SSU72Q9NP77 RNU6-70P-201ENST00000516438 60 ntBASIC1.4□□□□□ -2.19
SSU72Q9NP77 RNU6-1110P-201ENST00000516462 101 ntBASIC1.4□□□□□ -2.19
SSU72Q9NP77 SNORA31.24-201ENST00000517232 57 ntBASIC1.4□□□□□ -2.19
SSU72Q9NP77 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.4□□□□□ -2.19
SSU72Q9NP77 RNU6-1126P-201ENST00000384002 107 ntBASIC1.39□□□□□ -2.19
SSU72Q9NP77 SNORA26.9-201ENST00000391322 122 ntBASIC1.39□□□□□ -2.19
SSU72Q9NP77 MIR1289-2-201ENST00000408360 111 ntBASIC1.39□□□□□ -2.19
SSU72Q9NP77 RNU2-59P-201ENST00000410482 191 ntBASIC1.39□□□□□ -2.19
SSU72Q9NP77 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
SSU72Q9NP77 SNORD124-201ENST00000459577 104 ntBASIC1.39□□□□□ -2.19
SSU72Q9NP77 RNU6-295P-201ENST00000516901 104 ntBASIC1.39□□□□□ -2.19
SSU72Q9NP77 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
SSU72Q9NP77 AL136317.1-201ENST00000612653 226 ntBASIC1.39□□□□□ -2.19
SSU72Q9NP77 Y_RNA.258-201ENST00000364613 105 ntBASIC1.38□□□□□ -2.19
SSU72Q9NP77 SNORD115-44-201ENST00000365391 82 ntBASIC1.38□□□□□ -2.19
SSU72Q9NP77 MIR942-201ENST00000401111 86 ntBASIC1.38□□□□□ -2.19
SSU72Q9NP77 RNU1-123P-201ENST00000458950 160 ntBASIC1.38□□□□□ -2.19
SSU72Q9NP77 AC097510.1-201ENST00000510945 133 ntBASIC1.38□□□□□ -2.19
SSU72Q9NP77 RNU7-13P-201ENST00000516413 62 ntBASIC1.38□□□□□ -2.19
SSU72Q9NP77 SNORA25.15-201ENST00000516487 89 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 359.6 ms