Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.2□□□□□ -2.06
COL25A1Q9BXS0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.2□□□□□ -2.06
COL25A1Q9BXS0 RNU6-1039P-201ENST00000383931 107 ntBASIC2.19□□□□□ -2.06
COL25A1Q9BXS0 RNU1-123P-201ENST00000458950 160 ntBASIC2.19□□□□□ -2.06
COL25A1Q9BXS0 AC015688.6-201ENST00000577737 104 ntBASIC2.19□□□□□ -2.06
COL25A1Q9BXS0 AL049779.4-201ENST00000604500 156 ntBASIC2.19□□□□□ -2.06
COL25A1Q9BXS0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL25A1Q9BXS0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.18□□□□□ -2.06
COL25A1Q9BXS0 SNORA67.1-201ENST00000364749 141 ntBASIC2.18□□□□□ -2.06
COL25A1Q9BXS0 MIR1257-201ENST00000408490 117 ntBASIC2.18□□□□□ -2.06
COL25A1Q9BXS0 RNA5SP450-201ENST00000411206 102 ntBASIC2.18□□□□□ -2.06
COL25A1Q9BXS0 RNA5SP476-201ENST00000516613 103 ntBASIC2.18□□□□□ -2.06
COL25A1Q9BXS0 MIR3938-201ENST00000582157 103 ntBASIC2.18□□□□□ -2.06
COL25A1Q9BXS0 MIR6132-201ENST00000622083 109 ntBASIC2.18□□□□□ -2.06
COL25A1Q9BXS0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL25A1Q9BXS0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.18□□□□□ -2.06
COL25A1Q9BXS0 MIR103A2-201ENST00000362154 78 ntBASIC2.17□□□□□ -2.06
COL25A1Q9BXS0 RNU6-495P-201ENST00000362995 107 ntBASIC2.17□□□□□ -2.06
COL25A1Q9BXS0 RNA5SP264-201ENST00000363115 107 ntBASIC2.17□□□□□ -2.06
COL25A1Q9BXS0 SNORA67.5-201ENST00000391036 107 ntBASIC2.17□□□□□ -2.06
COL25A1Q9BXS0 AC003989.2-201ENST00000440224 169 ntBASIC2.17□□□□□ -2.06
COL25A1Q9BXS0 RNA5SP200-201ENST00000516360 103 ntBASIC2.17□□□□□ -2.06
COL25A1Q9BXS0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL25A1Q9BXS0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL25A1Q9BXS0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
COL25A1Q9BXS0 RNA5SP245-201ENST00000364239 121 ntBASIC2.16□□□□□ -2.06
COL25A1Q9BXS0 RNU1-52P-201ENST00000384190 164 ntBASIC2.16□□□□□ -2.06
COL25A1Q9BXS0 JTBP1-201ENST00000441314 247 ntBASIC2.16□□□□□ -2.06
COL25A1Q9BXS0 snoU13.21-201ENST00000459368 105 ntBASIC2.16□□□□□ -2.06
COL25A1Q9BXS0 RNU6-947P-201ENST00000516264 106 ntBASIC2.16□□□□□ -2.06
COL25A1Q9BXS0 RNU6-122P-201ENST00000516818 107 ntBASIC2.16□□□□□ -2.06
COL25A1Q9BXS0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.16□□□□□ -2.06
COL25A1Q9BXS0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.16□□□□□ -2.06
COL25A1Q9BXS0 MIR5092-201ENST00000583139 88 ntBASIC2.16□□□□□ -2.06
COL25A1Q9BXS0 MIR6509-201ENST00000614603 85 ntBASIC2.16□□□□□ -2.06
COL25A1Q9BXS0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.16□□□□□ -2.06
COL25A1Q9BXS0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL25A1Q9BXS0 AC131280.1-202ENST00000624067 4211 ntBASIC2.15□□□□□ -2.06
COL25A1Q9BXS0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
COL25A1Q9BXS0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
COL25A1Q9BXS0 RNU6-645P-201ENST00000364649 106 ntBASIC2.15□□□□□ -2.07
COL25A1Q9BXS0 RNA5SP299-201ENST00000391203 116 ntBASIC2.15□□□□□ -2.07
COL25A1Q9BXS0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.15□□□□□ -2.07
COL25A1Q9BXS0 MIR4658-201ENST00000584344 65 ntBASIC2.15□□□□□ -2.07
COL25A1Q9BXS0 AC245884.12-201ENST00000615364 59 ntBASIC2.15□□□□□ -2.07
COL25A1Q9BXS0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
COL25A1Q9BXS0 SNORD115-44-201ENST00000365391 82 ntBASIC2.14□□□□□ -2.07
COL25A1Q9BXS0 DEFA7P-201ENST00000382676 285 ntBASIC2.14□□□□□ -2.07
COL25A1Q9BXS0 MIR203A-201ENST00000384836 110 ntBASIC2.14□□□□□ -2.07
COL25A1Q9BXS0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.14□□□□□ -2.07
COL25A1Q9BXS0 NAMPTP3-201ENST00000569273 224 ntBASIC2.14□□□□□ -2.07
COL25A1Q9BXS0 MIR6766-201ENST00000622641 72 ntBASIC2.14□□□□□ -2.07
COL25A1Q9BXS0 MIR6073-201ENST00000352083 89 ntBASIC2.13□□□□□ -2.07
COL25A1Q9BXS0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.13□□□□□ -2.07
COL25A1Q9BXS0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.13□□□□□ -2.07
COL25A1Q9BXS0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
COL25A1Q9BXS0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL25A1Q9BXS0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL25A1Q9BXS0 SNORD83.1-201ENST00000411362 77 ntBASIC2.12□□□□□ -2.07
COL25A1Q9BXS0 AC244505.6-201ENST00000452829 130 ntBASIC2.12□□□□□ -2.07
COL25A1Q9BXS0 HAR1A.1-201ENST00000459583 118 ntBASIC2.12□□□□□ -2.07
COL25A1Q9BXS0 AL645939.4-201ENST00000604495 135 ntBASIC2.12□□□□□ -2.07
COL25A1Q9BXS0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL25A1Q9BXS0 RNA5SP215-201ENST00000363440 122 ntBASIC2.11□□□□□ -2.07
COL25A1Q9BXS0 MIR125B2-201ENST00000385128 89 ntBASIC2.11□□□□□ -2.07
COL25A1Q9BXS0 RNA5SP181-201ENST00000410246 98 ntBASIC2.11□□□□□ -2.07
COL25A1Q9BXS0 MIR3657-201ENST00000584818 117 ntBASIC2.11□□□□□ -2.07
COL25A1Q9BXS0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
COL25A1Q9BXS0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
COL25A1Q9BXS0 RNU6-535P-201ENST00000384722 107 ntBASIC2.1□□□□□ -2.07
COL25A1Q9BXS0 MIR524-201ENST00000385242 87 ntBASIC2.1□□□□□ -2.07
COL25A1Q9BXS0 RNU4-88P-201ENST00000411220 86 ntBASIC2.1□□□□□ -2.07
COL25A1Q9BXS0 SNORA31.25-201ENST00000517242 134 ntBASIC2.1□□□□□ -2.07
COL25A1Q9BXS0 RNU6-92P-201ENST00000605893 104 ntBASIC2.1□□□□□ -2.07
COL25A1Q9BXS0 MIR8081-201ENST00000611533 95 ntBASIC2.1□□□□□ -2.07
COL25A1Q9BXS0 RNA5SP82-201ENST00000516707 92 ntBASIC2.09□□□□□ -2.07
COL25A1Q9BXS0 MIR548AG2-201ENST00000581228 64 ntBASIC2.09□□□□□ -2.07
COL25A1Q9BXS0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.09□□□□□ -2.08
COL25A1Q9BXS0 RNU6-439P-201ENST00000384188 106 ntBASIC2.08□□□□□ -2.08
COL25A1Q9BXS0 MIR144-201ENST00000384886 86 ntBASIC2.08□□□□□ -2.08
COL25A1Q9BXS0 AC008608.1-201ENST00000603910 127 ntBASIC2.08□□□□□ -2.08
COL25A1Q9BXS0 SNORD60.1-201ENST00000362451 73 ntBASIC2.07□□□□□ -2.08
COL25A1Q9BXS0 RNU6-934P-201ENST00000365154 107 ntBASIC2.07□□□□□ -2.08
COL25A1Q9BXS0 RNU6-1126P-201ENST00000384002 107 ntBASIC2.07□□□□□ -2.08
COL25A1Q9BXS0 MIR216B-201ENST00000390186 82 ntBASIC2.07□□□□□ -2.08
COL25A1Q9BXS0 SNORA75.1-201ENST00000391130 148 ntBASIC2.07□□□□□ -2.08
COL25A1Q9BXS0 SUMO2P12-201ENST00000405924 140 ntBASIC2.07□□□□□ -2.08
COL25A1Q9BXS0 RNU7-13P-201ENST00000516413 62 ntBASIC2.07□□□□□ -2.08
COL25A1Q9BXS0 SNORA77B-201ENST00000578179 125 ntBASIC2.07□□□□□ -2.08
COL25A1Q9BXS0 AC084768.2-201ENST00000622736 221 ntBASIC2.07□□□□□ -2.08
COL25A1Q9BXS0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL25A1Q9BXS0 SNORA6-201ENST00000384033 151 ntBASIC2.06□□□□□ -2.08
COL25A1Q9BXS0 RNU6-260P-201ENST00000384092 107 ntBASIC2.06□□□□□ -2.08
COL25A1Q9BXS0 SNORA31.11-201ENST00000516528 139 ntBASIC2.06□□□□□ -2.08
COL25A1Q9BXS0 RNU6-656P-201ENST00000516785 107 ntBASIC2.06□□□□□ -2.08
COL25A1Q9BXS0 MIR4529-201ENST00000578110 78 ntBASIC2.06□□□□□ -2.08
COL25A1Q9BXS0 MIR548O2-201ENST00000616090 70 ntBASIC2.06□□□□□ -2.08
COL25A1Q9BXS0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
COL25A1Q9BXS0 RNU6-1089P-201ENST00000516473 104 ntBASIC2.05□□□□□ -2.08
COL25A1Q9BXS0 RNA5SP402-201ENST00000517148 110 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms