Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RNY4P20-201ENST00000516678 93 ntBASIC-1.05□□□□□ -2.58
UPK3BQ9BT76 MIR4499-201ENST00000584834 69 ntBASIC-1.05□□□□□ -2.58
UPK3BQ9BT76 AL137067.1-201ENST00000615933 120 ntBASIC-1.05□□□□□ -2.58
UPK3BQ9BT76 RNU6-957P-201ENST00000363652 99 ntBASIC-1.06□□□□□ -2.58
UPK3BQ9BT76 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.06□□□□□ -2.58
UPK3BQ9BT76 RNA5SP192-201ENST00000364404 120 ntBASIC-1.06□□□□□ -2.58
UPK3BQ9BT76 RNA5SP331-201ENST00000364986 107 ntBASIC-1.06□□□□□ -2.58
UPK3BQ9BT76 RNY4P28-201ENST00000365281 93 ntBASIC-1.06□□□□□ -2.58
UPK3BQ9BT76 RNU6-721P-201ENST00000410155 105 ntBASIC-1.06□□□□□ -2.58
UPK3BQ9BT76 RNU6-985P-201ENST00000410182 104 ntBASIC-1.06□□□□□ -2.58
UPK3BQ9BT76 MIR548O2-201ENST00000616090 70 ntBASIC-1.06□□□□□ -2.58
UPK3BQ9BT76 U6.106-201ENST00000636360 105 ntBASIC-1.06□□□□□ -2.58
UPK3BQ9BT76 MIR6844-201ENST00000637122 62 ntBASIC-1.06□□□□□ -2.58
UPK3BQ9BT76 MTND4P29-201ENST00000503122 1372 ntBASIC-1.07□□□□□ -2.58
UPK3BQ9BT76 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.07□□□□□ -2.58
UPK3BQ9BT76 MIR548P-201ENST00000408336 84 ntBASIC-1.07□□□□□ -2.58
UPK3BQ9BT76 AL500527.2-201ENST00000454105 95 ntBASIC-1.07□□□□□ -2.58
UPK3BQ9BT76 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.07□□□□□ -2.58
UPK3BQ9BT76 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.07□□□□□ -2.58
UPK3BQ9BT76 SNORD22.1-201ENST00000516331 125 ntBASIC-1.07□□□□□ -2.58
UPK3BQ9BT76 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.07□□□□□ -2.58
UPK3BQ9BT76 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.07□□□□□ -2.58
UPK3BQ9BT76 MIR3115-201ENST00000577915 68 ntBASIC-1.07□□□□□ -2.58
UPK3BQ9BT76 MIR4308-201ENST00000580634 81 ntBASIC-1.07□□□□□ -2.58
UPK3BQ9BT76 MIR548S-201ENST00000581352 82 ntBASIC-1.07□□□□□ -2.58
UPK3BQ9BT76 uc_338.19-201ENST00000616808 99 ntBASIC-1.07□□□□□ -2.58
UPK3BQ9BT76 AL160413.1-201ENST00000622780 310 ntBASIC-1.07□□□□□ -2.58
UPK3BQ9BT76 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.08□□□□□ -2.58
UPK3BQ9BT76 SNORD114-4-201ENST00000363962 75 ntBASIC-1.08□□□□□ -2.58
UPK3BQ9BT76 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.08□□□□□ -2.58
UPK3BQ9BT76 SNORD101-201ENST00000384027 73 ntBASIC-1.08□□□□□ -2.58
UPK3BQ9BT76 MIR3165-201ENST00000579874 75 ntBASIC-1.08□□□□□ -2.58
UPK3BQ9BT76 MIR4306-201ENST00000583390 91 ntBASIC-1.08□□□□□ -2.58
UPK3BQ9BT76 MIR3149-201ENST00000584629 83 ntBASIC-1.08□□□□□ -2.58
UPK3BQ9BT76 RNU6-309P-201ENST00000364573 106 ntBASIC-1.09□□□□□ -2.58
UPK3BQ9BT76 SNORD74.6-201ENST00000364796 70 ntBASIC-1.09□□□□□ -2.58
UPK3BQ9BT76 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.09□□□□□ -2.58
UPK3BQ9BT76 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.09□□□□□ -2.58
UPK3BQ9BT76 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.09□□□□□ -2.58
UPK3BQ9BT76 MT-TW-201ENST00000387382 68 ntBASIC-1.09□□□□□ -2.58
UPK3BQ9BT76 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
UPK3BQ9BT76 RNU6-588P-201ENST00000410281 105 ntBASIC-1.09□□□□□ -2.58
UPK3BQ9BT76 AC022137.1-201ENST00000483735 151 ntBASIC-1.09□□□□□ -2.58
UPK3BQ9BT76 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.09□□□□□ -2.58
UPK3BQ9BT76 RNU6-90P-201ENST00000606352 106 ntBASIC-1.09□□□□□ -2.58
UPK3BQ9BT76 MIR6854-201ENST00000614935 69 ntBASIC-1.09□□□□□ -2.58
UPK3BQ9BT76 RNU6-664P-201ENST00000362381 107 ntBASIC-1.1□□□□□ -2.59
UPK3BQ9BT76 SNORD114-25-201ENST00000363742 72 ntBASIC-1.1□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.1□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.1□□□□□ -2.59
UPK3BQ9BT76 RNU6-466P-201ENST00000391224 103 ntBASIC-1.1□□□□□ -2.59
UPK3BQ9BT76 AC107027.2-201ENST00000512197 115 ntBASIC-1.1□□□□□ -2.59
UPK3BQ9BT76 MIR4696-201ENST00000581431 70 ntBASIC-1.1□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.1□□□□□ -2.59
UPK3BQ9BT76 U4.1-201ENST00000620349 87 ntBASIC-1.1□□□□□ -2.59
UPK3BQ9BT76 MIR8062-201ENST00000621515 85 ntBASIC-1.1□□□□□ -2.59
UPK3BQ9BT76 MIR4320-201ENST00000636981 65 ntBASIC-1.1□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.11□□□□□ -2.59
UPK3BQ9BT76 SNORD115-19-201ENST00000363098 82 ntBASIC-1.11□□□□□ -2.59
UPK3BQ9BT76 RNU6-508P-201ENST00000363231 103 ntBASIC-1.11□□□□□ -2.59
UPK3BQ9BT76 SNORD115-18-201ENST00000363293 82 ntBASIC-1.11□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.11□□□□□ -2.59
UPK3BQ9BT76 SNORD115-17-201ENST00000364612 82 ntBASIC-1.11□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.11□□□□□ -2.59
UPK3BQ9BT76 MIR517B-201ENST00000385102 67 ntBASIC-1.11□□□□□ -2.59
UPK3BQ9BT76 AP000533.3-201ENST00000447704 118 ntBASIC-1.11□□□□□ -2.59
UPK3BQ9BT76 RNU6-762P-201ENST00000517107 102 ntBASIC-1.11□□□□□ -2.59
UPK3BQ9BT76 MIR3646-201ENST00000578301 84 ntBASIC-1.11□□□□□ -2.59
UPK3BQ9BT76 MIR3163-201ENST00000581592 73 ntBASIC-1.11□□□□□ -2.59
UPK3BQ9BT76 MIR5704-201ENST00000584029 77 ntBASIC-1.11□□□□□ -2.59
UPK3BQ9BT76 MIR3171-201ENST00000584270 74 ntBASIC-1.11□□□□□ -2.59
UPK3BQ9BT76 AL512310.12-203ENST00000640543 90 ntBASIC-1.11□□□□□ -2.59
UPK3BQ9BT76 RNU4-32P-201ENST00000363404 141 ntBASIC-1.12□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.12□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.12□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.12□□□□□ -2.59
UPK3BQ9BT76 RNU6-476P-201ENST00000384726 107 ntBASIC-1.12□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.12□□□□□ -2.59
UPK3BQ9BT76 MIR548G-201ENST00000408442 89 ntBASIC-1.12□□□□□ -2.59
UPK3BQ9BT76 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.12□□□□□ -2.59
UPK3BQ9BT76 RNU6-635P-201ENST00000516651 102 ntBASIC-1.12□□□□□ -2.59
UPK3BQ9BT76 snoR1.1-201ENST00000628177 80 ntBASIC-1.12□□□□□ -2.59
UPK3BQ9BT76 AC021753.1-201ENST00000635724 168 ntBASIC-1.12□□□□□ -2.59
UPK3BQ9BT76 RNU6-238P-201ENST00000363313 106 ntBASIC-1.13□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.13□□□□□ -2.59
UPK3BQ9BT76 MIR759-201ENST00000390224 91 ntBASIC-1.13□□□□□ -2.59
UPK3BQ9BT76 RNU6-935P-201ENST00000410371 100 ntBASIC-1.13□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.13□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.13□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.14□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.14□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.14□□□□□ -2.59
UPK3BQ9BT76 MIR548E-201ENST00000408287 88 ntBASIC-1.14□□□□□ -2.59
UPK3BQ9BT76 SNORA7.5-201ENST00000410672 110 ntBASIC-1.14□□□□□ -2.59
UPK3BQ9BT76 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.14□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.15□□□□□ -2.59
UPK3BQ9BT76 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.15□□□□□ -2.59
UPK3BQ9BT76 SNORD38.1-201ENST00000363863 68 ntBASIC-1.15□□□□□ -2.59
UPK3BQ9BT76 MIR582-201ENST00000365731 98 ntBASIC-1.15□□□□□ -2.59
UPK3BQ9BT76 RNU6-639P-201ENST00000384074 107 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 211.4 ms