Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 RNA5SP245-201ENST00000364239 121 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 Y_RNA.437-201ENST00000384113 113 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 MIR519A1-201ENST00000385257 85 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 RNA5SP247-201ENST00000411181 105 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 AC093729.1-201ENST00000513074 128 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 RNU7-153P-201ENST00000516455 62 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 AC019288.1-201ENST00000557918 224 ntBASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
PDLIM2Q96JY6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
PDLIM2Q96JY6 SNORA25.8-201ENST00000364831 128 ntBASIC1.07□□□□□ -2.24
PDLIM2Q96JY6 Y_RNA.508-201ENST00000384502 114 ntBASIC1.07□□□□□ -2.24
PDLIM2Q96JY6 SNORD89-201ENST00000390981 114 ntBASIC1.07□□□□□ -2.24
PDLIM2Q96JY6 RNU6-228P-201ENST00000362700 106 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 RNU6-1260P-201ENST00000362944 107 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 Y_RNA.226-201ENST00000364337 114 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 RNU6-787P-201ENST00000384032 107 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 RNU6-811P-201ENST00000384069 107 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 MIR599-201ENST00000385069 95 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 AC097635.1-201ENST00000450678 155 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 MIR4666B-201ENST00000578142 81 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 AL136317.1-201ENST00000612653 226 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 RMST_2.1-201ENST00000617263 136 ntBASIC1.06□□□□□ -2.24
PDLIM2Q96JY6 Y_RNA.313-201ENST00000365095 103 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 MIR520H-201ENST00000385126 88 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 MIR1255A-201ENST00000408338 113 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 Y_RNA.607-201ENST00000410597 98 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 FABP5P4-201ENST00000437203 171 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 RNU6-75P-201ENST00000515944 104 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 Y_RNA.685-201ENST00000516532 108 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 TRDV1-202ENST00000621643 102 ntBASIC1.05□□□□□ -2.24
PDLIM2Q96JY6 RNU6-1275P-201ENST00000391087 107 ntBASIC1.04□□□□□ -2.24
PDLIM2Q96JY6 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
PDLIM2Q96JY6 MIRLET7F1-201ENST00000362202 87 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 RNU6-652P-201ENST00000365488 107 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 RNU6-132P-201ENST00000383863 107 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 MIR19B1-201ENST00000384829 87 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 MIR548U-201ENST00000390728 81 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 MIR942-201ENST00000401111 86 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 AL606490.4-201ENST00000423117 127 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 SNORD124-201ENST00000459577 104 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 RNU6-1110P-201ENST00000516462 101 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 SNORA31.14-201ENST00000516728 116 ntBASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
PDLIM2Q96JY6 Y_RNA.32-201ENST00000362589 110 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 Y_RNA.221-201ENST00000364248 96 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 RNA5SP292-201ENST00000390974 118 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 MIR1276-201ENST00000408707 83 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 RNA5SP225-201ENST00000410874 135 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 U7.7-201ENST00000459276 60 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 SNORA25.13-201ENST00000516395 103 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 SNORA18.5-201ENST00000516616 101 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 AC140658.3-201ENST00000567603 271 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 MIR4796-201ENST00000580742 81 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 MIR3064-201ENST00000581130 66 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 AC104996.3-201ENST00000590718 94 ntBASIC1.02□□□□□ -2.25
PDLIM2Q96JY6 Y_RNA.174-201ENST00000363781 105 ntBASIC1.01□□□□□ -2.25
PDLIM2Q96JY6 MIR200A-201ENST00000384875 90 ntBASIC1.01□□□□□ -2.25
PDLIM2Q96JY6 MIR499A-201ENST00000384903 122 ntBASIC1.01□□□□□ -2.25
PDLIM2Q96JY6 SNORD105-201ENST00000386910 85 ntBASIC1.01□□□□□ -2.25
PDLIM2Q96JY6 MIR1287-201ENST00000408492 90 ntBASIC1.01□□□□□ -2.25
PDLIM2Q96JY6 uc_338.16-201ENST00000621804 95 ntBASIC1.01□□□□□ -2.25
PDLIM2Q96JY6 SNORA25.9-201ENST00000365087 128 ntBASIC1□□□□□ -2.25
PDLIM2Q96JY6 Y_RNA.316-201ENST00000365118 111 ntBASIC1□□□□□ -2.25
PDLIM2Q96JY6 RNA5SP117-201ENST00000365294 118 ntBASIC1□□□□□ -2.25
PDLIM2Q96JY6 Y_RNA.491-201ENST00000384417 107 ntBASIC1□□□□□ -2.25
PDLIM2Q96JY6 MIR518E-201ENST00000385252 88 ntBASIC1□□□□□ -2.25
PDLIM2Q96JY6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1□□□□□ -2.25
PDLIM2Q96JY6 AC244505.6-201ENST00000452829 130 ntBASIC1□□□□□ -2.25
PDLIM2Q96JY6 RPL39P28-201ENST00000465655 155 ntBASIC1□□□□□ -2.25
PDLIM2Q96JY6 AC002350.1-201ENST00000490759 375 ntBASIC0.99□□□□□ -2.25
PDLIM2Q96JY6 RNA5SP102-201ENST00000516865 106 ntBASIC0.99□□□□□ -2.25
PDLIM2Q96JY6 RNA5SP404-201ENST00000517118 132 ntBASIC0.99□□□□□ -2.25
PDLIM2Q96JY6 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.99□□□□□ -2.25
PDLIM2Q96JY6 U6.100-201ENST00000636230 99 ntBASIC0.99□□□□□ -2.25
PDLIM2Q96JY6 SNORD115-24-201ENST00000363528 82 ntBASIC0.98□□□□□ -2.25
PDLIM2Q96JY6 Y_RNA.239-201ENST00000364444 113 ntBASIC0.98□□□□□ -2.25
PDLIM2Q96JY6 SNORD101-201ENST00000384027 73 ntBASIC0.98□□□□□ -2.25
PDLIM2Q96JY6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.98□□□□□ -2.25
PDLIM2Q96JY6 MIR4696-201ENST00000581431 70 ntBASIC0.98□□□□□ -2.25
PDLIM2Q96JY6 RNU6-664P-201ENST00000362381 107 ntBASIC0.97□□□□□ -2.25
PDLIM2Q96JY6 SNORD114-24-201ENST00000365029 72 ntBASIC0.97□□□□□ -2.25
PDLIM2Q96JY6 MIR146A-201ENST00000385201 99 ntBASIC0.97□□□□□ -2.25
PDLIM2Q96JY6 Y_RNA.596-201ENST00000410462 109 ntBASIC0.97□□□□□ -2.25
PDLIM2Q96JY6 RNU6-351P-201ENST00000516097 100 ntBASIC0.97□□□□□ -2.25
PDLIM2Q96JY6 RNU6-638P-201ENST00000516582 104 ntBASIC0.97□□□□□ -2.25
PDLIM2Q96JY6 MIR6504-201ENST00000613520 61 ntBASIC0.97□□□□□ -2.25
PDLIM2Q96JY6 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
PDLIM2Q96JY6 RNU1-124P-201ENST00000363861 145 ntBASIC0.96□□□□□ -2.26
PDLIM2Q96JY6 RNU6-1335P-201ENST00000365426 107 ntBASIC0.96□□□□□ -2.26
PDLIM2Q96JY6 MIR644A-201ENST00000385262 94 ntBASIC0.96□□□□□ -2.26
PDLIM2Q96JY6 RNU6-1265P-201ENST00000516342 103 ntBASIC0.96□□□□□ -2.26
PDLIM2Q96JY6 AC025627.3-201ENST00000582078 182 ntBASIC0.96□□□□□ -2.26
PDLIM2Q96JY6 SNORD114-2-201ENST00000363953 78 ntBASIC0.95□□□□□ -2.26
PDLIM2Q96JY6 RNU6-129P-201ENST00000391022 107 ntBASIC0.95□□□□□ -2.26
PDLIM2Q96JY6 RNU6-279P-201ENST00000391297 101 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 310.1 ms