Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 MIR3140-201ENST00000583685 90 ntBASIC1.49□□□□□ -2.17
CHFRQ96EP1 Y_RNA.42-201ENST00000362660 108 ntBASIC1.48□□□□□ -2.17
CHFRQ96EP1 RNU1-36P-201ENST00000365130 165 ntBASIC1.48□□□□□ -2.17
CHFRQ96EP1 RNU6-580P-201ENST00000365159 107 ntBASIC1.48□□□□□ -2.17
CHFRQ96EP1 Y_RNA.536-201ENST00000384621 113 ntBASIC1.48□□□□□ -2.17
CHFRQ96EP1 AC015688.6-201ENST00000577737 104 ntBASIC1.48□□□□□ -2.17
CHFRQ96EP1 SNORA77B-201ENST00000578179 125 ntBASIC1.48□□□□□ -2.17
CHFRQ96EP1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.48□□□□□ -2.17
CHFRQ96EP1 RNU6-340P-201ENST00000364005 107 ntBASIC1.47□□□□□ -2.17
CHFRQ96EP1 RNU6-471P-201ENST00000383944 106 ntBASIC1.47□□□□□ -2.17
CHFRQ96EP1 SNORA8.1-201ENST00000384250 140 ntBASIC1.47□□□□□ -2.17
CHFRQ96EP1 MIR154-201ENST00000385243 84 ntBASIC1.47□□□□□ -2.17
CHFRQ96EP1 MIR519A1-201ENST00000385257 85 ntBASIC1.47□□□□□ -2.17
CHFRQ96EP1 RNU6-663P-201ENST00000391105 106 ntBASIC1.47□□□□□ -2.17
CHFRQ96EP1 SNORD93-201ENST00000408813 74 ntBASIC1.47□□□□□ -2.17
CHFRQ96EP1 MIR4696-201ENST00000581431 70 ntBASIC1.47□□□□□ -2.17
CHFRQ96EP1 AC013244.2-201ENST00000603396 103 ntBASIC1.47□□□□□ -2.17
CHFRQ96EP1 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.47□□□□□ -2.17
CHFRQ96EP1 AL353770.2-201ENST00000620024 78 ntBASIC1.47□□□□□ -2.17
CHFRQ96EP1 TRDV1-202ENST00000621643 102 ntBASIC1.47□□□□□ -2.17
CHFRQ96EP1 U6.100-201ENST00000636230 99 ntBASIC1.47□□□□□ -2.17
CHFRQ96EP1 MIR377-201ENST00000362145 69 ntBASIC1.46□□□□□ -2.18
CHFRQ96EP1 SNORA25.8-201ENST00000364831 128 ntBASIC1.46□□□□□ -2.18
CHFRQ96EP1 Y_RNA.371-201ENST00000365591 113 ntBASIC1.46□□□□□ -2.18
CHFRQ96EP1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.46□□□□□ -2.18
CHFRQ96EP1 MIR150-201ENST00000385048 84 ntBASIC1.46□□□□□ -2.18
CHFRQ96EP1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CHFRQ96EP1 RNU1-123P-201ENST00000458950 160 ntBASIC1.46□□□□□ -2.18
CHFRQ96EP1 snoU13.21-201ENST00000459368 105 ntBASIC1.46□□□□□ -2.18
CHFRQ96EP1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.46□□□□□ -2.18
CHFRQ96EP1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.46□□□□□ -2.18
CHFRQ96EP1 AC005520.4-201ENST00000604337 90 ntBASIC1.46□□□□□ -2.18
CHFRQ96EP1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.46□□□□□ -2.18
CHFRQ96EP1 RNU6-1260P-201ENST00000362944 107 ntBASIC1.45□□□□□ -2.18
CHFRQ96EP1 RNU6-403P-201ENST00000363163 104 ntBASIC1.45□□□□□ -2.18
CHFRQ96EP1 SNORA24B-201ENST00000384176 131 ntBASIC1.45□□□□□ -2.18
CHFRQ96EP1 AL133373.1-201ENST00000497098 94 ntBASIC1.45□□□□□ -2.18
CHFRQ96EP1 RNU6-947P-201ENST00000516264 106 ntBASIC1.45□□□□□ -2.18
CHFRQ96EP1 MTRNR2L2-201ENST00000604882 87 ntBASIC1.45□□□□□ -2.18
CHFRQ96EP1 MIR6504-201ENST00000613520 61 ntBASIC1.45□□□□□ -2.18
CHFRQ96EP1 RNU6-664P-201ENST00000362381 107 ntBASIC1.44□□□□□ -2.18
CHFRQ96EP1 RNA5SP264-201ENST00000363115 107 ntBASIC1.44□□□□□ -2.18
CHFRQ96EP1 MIR9-2-201ENST00000384838 87 ntBASIC1.44□□□□□ -2.18
CHFRQ96EP1 MIR489-201ENST00000384923 84 ntBASIC1.44□□□□□ -2.18
CHFRQ96EP1 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
CHFRQ96EP1 Y_RNA.606-201ENST00000410579 103 ntBASIC1.44□□□□□ -2.18
CHFRQ96EP1 AC092628.1-201ENST00000436250 252 ntBASIC1.44□□□□□ -2.18
CHFRQ96EP1 MIR18B-201ENST00000454574 71 ntBASIC1.44□□□□□ -2.18
CHFRQ96EP1 Y_RNA.809-201ENST00000516058 95 ntBASIC1.44□□□□□ -2.18
CHFRQ96EP1 RNA5SP102-201ENST00000516865 106 ntBASIC1.44□□□□□ -2.18
CHFRQ96EP1 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.44□□□□□ -2.18
CHFRQ96EP1 Y_RNA.13-201ENST00000362403 112 ntBASIC1.43□□□□□ -2.18
CHFRQ96EP1 RNU6-824P-201ENST00000363724 104 ntBASIC1.43□□□□□ -2.18
CHFRQ96EP1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.43□□□□□ -2.18
CHFRQ96EP1 Y_RNA.239-201ENST00000364444 113 ntBASIC1.43□□□□□ -2.18
CHFRQ96EP1 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
CHFRQ96EP1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CHFRQ96EP1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.43□□□□□ -2.18
CHFRQ96EP1 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.43□□□□□ -2.18
CHFRQ96EP1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CHFRQ96EP1 MIR103A2-201ENST00000362154 78 ntBASIC1.42□□□□□ -2.18
CHFRQ96EP1 MIR96-201ENST00000362288 78 ntBASIC1.42□□□□□ -2.18
CHFRQ96EP1 Y_RNA.56-201ENST00000362798 112 ntBASIC1.42□□□□□ -2.18
CHFRQ96EP1 SNORD1A-201ENST00000364968 72 ntBASIC1.42□□□□□ -2.18
CHFRQ96EP1 SNORD101-201ENST00000384027 73 ntBASIC1.42□□□□□ -2.18
CHFRQ96EP1 SNORD45A-201ENST00000384512 84 ntBASIC1.42□□□□□ -2.18
CHFRQ96EP1 RNU6-939P-201ENST00000384634 107 ntBASIC1.42□□□□□ -2.18
CHFRQ96EP1 RPS27P16-201ENST00000425758 201 ntBASIC1.42□□□□□ -2.18
CHFRQ96EP1 RNU7-185P-201ENST00000459215 60 ntBASIC1.42□□□□□ -2.18
CHFRQ96EP1 Y_RNA.697-201ENST00000516776 113 ntBASIC1.42□□□□□ -2.18
CHFRQ96EP1 AC019176.1-201ENST00000518519 225 ntBASIC1.42□□□□□ -2.18
CHFRQ96EP1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.42□□□□□ -2.18
CHFRQ96EP1 MIR548H5-201ENST00000580314 60 ntBASIC1.42□□□□□ -2.18
CHFRQ96EP1 MIR6082-201ENST00000613604 109 ntBASIC1.42□□□□□ -2.18
CHFRQ96EP1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CHFRQ96EP1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
CHFRQ96EP1 MIR101-2-201ENST00000362195 79 ntBASIC1.41□□□□□ -2.18
CHFRQ96EP1 MIR3675-201ENST00000583661 73 ntBASIC1.41□□□□□ -2.18
CHFRQ96EP1 MIR3660-201ENST00000584845 100 ntBASIC1.41□□□□□ -2.18
CHFRQ96EP1 U6.81-201ENST00000612550 106 ntBASIC1.41□□□□□ -2.18
CHFRQ96EP1 AC023934.1-201ENST00000574529 2389 ntBASIC1.41□□□□□ -2.18
CHFRQ96EP1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CHFRQ96EP1 SNORD115-22-201ENST00000364456 82 ntBASIC1.4□□□□□ -2.19
CHFRQ96EP1 SNORD116-24-201ENST00000384549 92 ntBASIC1.4□□□□□ -2.19
CHFRQ96EP1 RNU6-630P-201ENST00000391258 106 ntBASIC1.4□□□□□ -2.19
CHFRQ96EP1 RNU6-1052P-201ENST00000411398 104 ntBASIC1.4□□□□□ -2.19
CHFRQ96EP1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.4□□□□□ -2.19
CHFRQ96EP1 RNU6-719P-201ENST00000516671 104 ntBASIC1.4□□□□□ -2.19
CHFRQ96EP1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CHFRQ96EP1 RNY4P3-201ENST00000365254 95 ntBASIC1.39□□□□□ -2.19
CHFRQ96EP1 SNORD83.1-201ENST00000411362 77 ntBASIC1.39□□□□□ -2.19
CHFRQ96EP1 AC097510.1-201ENST00000510945 133 ntBASIC1.39□□□□□ -2.19
CHFRQ96EP1 RNU6-1265P-201ENST00000516342 103 ntBASIC1.39□□□□□ -2.19
CHFRQ96EP1 RNU7-10P-201ENST00000607194 63 ntBASIC1.39□□□□□ -2.19
CHFRQ96EP1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
CHFRQ96EP1 MIR302D-201ENST00000362275 68 ntBASIC1.38□□□□□ -2.19
CHFRQ96EP1 RNA5SP245-201ENST00000364239 121 ntBASIC1.38□□□□□ -2.19
CHFRQ96EP1 SNORD114-22-201ENST00000365423 72 ntBASIC1.38□□□□□ -2.19
CHFRQ96EP1 RNU6-987P-201ENST00000384759 104 ntBASIC1.38□□□□□ -2.19
CHFRQ96EP1 MTND4LP19-201ENST00000403051 166 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms