Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 RNA5SP268-201ENST00000516828 124 ntBASIC0.56□□□□□ -2.32
NPIPB3Q92617 MIR2052-201ENST00000636055 55 ntBASIC0.56□□□□□ -2.32
NPIPB3Q92617 Y_RNA.221-201ENST00000364248 96 ntBASIC0.55□□□□□ -2.32
NPIPB3Q92617 RNU6-524P-201ENST00000384270 107 ntBASIC0.55□□□□□ -2.32
NPIPB3Q92617 RNA5SP227-201ENST00000516184 113 ntBASIC0.55□□□□□ -2.32
NPIPB3Q92617 RNU6-168P-201ENST00000516189 101 ntBASIC0.55□□□□□ -2.32
NPIPB3Q92617 AL513043.2-201ENST00000573941 143 ntBASIC0.55□□□□□ -2.32
NPIPB3Q92617 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.55□□□□□ -2.32
NPIPB3Q92617 RNA5SP403-201ENST00000363598 108 ntBASIC0.54□□□□□ -2.32
NPIPB3Q92617 Y_RNA.348-201ENST00000365403 103 ntBASIC0.54□□□□□ -2.32
NPIPB3Q92617 RNU7-104P-201ENST00000459398 79 ntBASIC0.54□□□□□ -2.32
NPIPB3Q92617 RNU6-1265P-201ENST00000516342 103 ntBASIC0.54□□□□□ -2.32
NPIPB3Q92617 Y_RNA.677-201ENST00000516401 85 ntBASIC0.54□□□□□ -2.32
NPIPB3Q92617 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.54□□□□□ -2.32
NPIPB3Q92617 MIR373-201ENST00000362273 69 ntBASIC0.53□□□□□ -2.32
NPIPB3Q92617 SNORD116-10-201ENST00000363791 102 ntBASIC0.53□□□□□ -2.32
NPIPB3Q92617 MIR520E-201ENST00000384867 87 ntBASIC0.53□□□□□ -2.32
NPIPB3Q92617 MIR518A1-201ENST00000385068 85 ntBASIC0.53□□□□□ -2.32
NPIPB3Q92617 RNU6-466P-201ENST00000391224 103 ntBASIC0.53□□□□□ -2.32
NPIPB3Q92617 RNA5SP89-201ENST00000410300 108 ntBASIC0.53□□□□□ -2.32
NPIPB3Q92617 Y_RNA.648-201ENST00000459455 110 ntBASIC0.53□□□□□ -2.32
NPIPB3Q92617 RNU7-161P-201ENST00000517289 62 ntBASIC0.53□□□□□ -2.32
NPIPB3Q92617 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.53□□□□□ -2.32
NPIPB3Q92617 MIR6835-201ENST00000621552 64 ntBASIC0.53□□□□□ -2.32
NPIPB3Q92617 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
NPIPB3Q92617 MIR548L-201ENST00000408303 86 ntBASIC0.52□□□□□ -2.33
NPIPB3Q92617 RNA5SP102-201ENST00000516865 106 ntBASIC0.52□□□□□ -2.33
NPIPB3Q92617 SNORA25.18-201ENST00000607153 114 ntBASIC0.52□□□□□ -2.33
NPIPB3Q92617 U7.3-201ENST00000616123 62 ntBASIC0.52□□□□□ -2.33
NPIPB3Q92617 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.52□□□□□ -2.33
NPIPB3Q92617 TRDV1-202ENST00000621643 102 ntBASIC0.52□□□□□ -2.33
NPIPB3Q92617 AC067863.3-201ENST00000624172 122 ntBASIC0.52□□□□□ -2.33
NPIPB3Q92617 SNORD118-201ENST00000363593 134 ntBASIC0.51□□□□□ -2.33
NPIPB3Q92617 RNU6-640P-201ENST00000363693 105 ntBASIC0.51□□□□□ -2.33
NPIPB3Q92617 Y_RNA.283-201ENST00000364798 112 ntBASIC0.51□□□□□ -2.33
NPIPB3Q92617 SNORD58A-201ENST00000383875 65 ntBASIC0.51□□□□□ -2.33
NPIPB3Q92617 RNU6-905P-201ENST00000384434 107 ntBASIC0.51□□□□□ -2.33
NPIPB3Q92617 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.51□□□□□ -2.33
NPIPB3Q92617 snoU13.11-201ENST00000459219 104 ntBASIC0.51□□□□□ -2.33
NPIPB3Q92617 RNU6-162P-201ENST00000516228 103 ntBASIC0.51□□□□□ -2.33
NPIPB3Q92617 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.51□□□□□ -2.33
NPIPB3Q92617 RNU6-957P-201ENST00000363652 99 ntBASIC0.5□□□□□ -2.33
NPIPB3Q92617 AL161932.1-201ENST00000437408 146 ntBASIC0.5□□□□□ -2.33
NPIPB3Q92617 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.5□□□□□ -2.33
NPIPB3Q92617 RNU7-13P-201ENST00000516413 62 ntBASIC0.5□□□□□ -2.33
NPIPB3Q92617 MIR7107-201ENST00000611489 80 ntBASIC0.5□□□□□ -2.33
NPIPB3Q92617 MIR6767-201ENST00000637302 66 ntBASIC0.5□□□□□ -2.33
NPIPB3Q92617 Y_RNA.290-201ENST00000364879 114 ntBASIC0.49□□□□□ -2.33
NPIPB3Q92617 RNU6-716P-201ENST00000365621 103 ntBASIC0.49□□□□□ -2.33
NPIPB3Q92617 AC098934.3-201ENST00000430450 190 ntBASIC0.49□□□□□ -2.33
NPIPB3Q92617 MALAT1.1-201ENST00000618249 95 ntBASIC0.49□□□□□ -2.33
NPIPB3Q92617 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
NPIPB3Q92617 Y_RNA.4-201ENST00000362333 112 ntBASIC0.48□□□□□ -2.33
NPIPB3Q92617 RNU6-726P-201ENST00000364680 107 ntBASIC0.48□□□□□ -2.33
NPIPB3Q92617 MIR508-201ENST00000384857 115 ntBASIC0.48□□□□□ -2.33
NPIPB3Q92617 MTATP6P29-201ENST00000415057 132 ntBASIC0.48□□□□□ -2.33
NPIPB3Q92617 U6.100-201ENST00000636230 99 ntBASIC0.48□□□□□ -2.33
NPIPB3Q92617 MIR96-201ENST00000362288 78 ntBASIC0.47□□□□□ -2.33
NPIPB3Q92617 SNORD115-44-201ENST00000365391 82 ntBASIC0.47□□□□□ -2.33
NPIPB3Q92617 MIR92A1-201ENST00000385233 78 ntBASIC0.47□□□□□ -2.33
NPIPB3Q92617 RNU6-519P-201ENST00000410590 108 ntBASIC0.47□□□□□ -2.33
NPIPB3Q92617 SNORA68.3-201ENST00000515906 83 ntBASIC0.47□□□□□ -2.33
NPIPB3Q92617 RNU6-863P-201ENST00000515989 104 ntBASIC0.47□□□□□ -2.33
NPIPB3Q92617 RNU6-65P-201ENST00000516332 98 ntBASIC0.47□□□□□ -2.33
NPIPB3Q92617 Y_RNA.164-201ENST00000363709 102 ntBASIC0.46□□□□□ -2.34
NPIPB3Q92617 SNORA25.9-201ENST00000365087 128 ntBASIC0.46□□□□□ -2.34
NPIPB3Q92617 RNU6-1126P-201ENST00000384002 107 ntBASIC0.46□□□□□ -2.34
NPIPB3Q92617 SNORD41.1-201ENST00000391000 69 ntBASIC0.46□□□□□ -2.34
NPIPB3Q92617 Y_RNA.596-201ENST00000410462 109 ntBASIC0.46□□□□□ -2.34
NPIPB3Q92617 RNU2-59P-201ENST00000410482 191 ntBASIC0.46□□□□□ -2.34
NPIPB3Q92617 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.46□□□□□ -2.34
NPIPB3Q92617 RNU7-85P-201ENST00000458851 63 ntBASIC0.46□□□□□ -2.34
NPIPB3Q92617 MIR3920-201ENST00000581751 86 ntBASIC0.46□□□□□ -2.34
NPIPB3Q92617 MIR4536-1-201ENST00000583537 88 ntBASIC0.46□□□□□ -2.34
NPIPB3Q92617 uc_338.17-201ENST00000619633 179 ntBASIC0.46□□□□□ -2.34
NPIPB3Q92617 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
NPIPB3Q92617 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
NPIPB3Q92617 MIR488-201ENST00000365739 83 ntBASIC0.45□□□□□ -2.34
NPIPB3Q92617 RNU6-75P-201ENST00000515944 104 ntBASIC0.45□□□□□ -2.34
NPIPB3Q92617 MTRNR2L2-201ENST00000604882 87 ntBASIC0.45□□□□□ -2.34
NPIPB3Q92617 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.44□□□□□ -2.34
NPIPB3Q92617 MIRLET7D-201ENST00000362263 87 ntBASIC0.44□□□□□ -2.34
NPIPB3Q92617 Y_RNA.190-201ENST00000363964 101 ntBASIC0.44□□□□□ -2.34
NPIPB3Q92617 Y_RNA.191-201ENST00000363972 113 ntBASIC0.44□□□□□ -2.34
NPIPB3Q92617 Y_RNA.220-201ENST00000364244 109 ntBASIC0.44□□□□□ -2.34
NPIPB3Q92617 SNORD101-201ENST00000384027 73 ntBASIC0.44□□□□□ -2.34
NPIPB3Q92617 Y_RNA.609-201ENST00000410669 89 ntBASIC0.44□□□□□ -2.34
NPIPB3Q92617 SNORD4B-201ENST00000459083 72 ntBASIC0.44□□□□□ -2.34
NPIPB3Q92617 RNU7-74P-201ENST00000459104 62 ntBASIC0.44□□□□□ -2.34
NPIPB3Q92617 Y_RNA.694-201ENST00000516677 117 ntBASIC0.44□□□□□ -2.34
NPIPB3Q92617 RNU1-93P-201ENST00000364704 169 ntBASIC0.43□□□□□ -2.34
NPIPB3Q92617 MIR1276-201ENST00000408707 83 ntBASIC0.43□□□□□ -2.34
NPIPB3Q92617 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.43□□□□□ -2.34
NPIPB3Q92617 MIR6504-201ENST00000613520 61 ntBASIC0.43□□□□□ -2.34
NPIPB3Q92617 MIR8070-201ENST00000616510 88 ntBASIC0.43□□□□□ -2.34
NPIPB3Q92617 AL162376.1-201ENST00000624117 175 ntBASIC0.43□□□□□ -2.34
NPIPB3Q92617 RNU6-664P-201ENST00000362381 107 ntBASIC0.42□□□□□ -2.34
NPIPB3Q92617 SNORD44.1-201ENST00000363202 61 ntBASIC0.42□□□□□ -2.34
NPIPB3Q92617 SNORD114-22-201ENST00000365423 72 ntBASIC0.42□□□□□ -2.34
NPIPB3Q92617 AC069271.1-201ENST00000445577 156 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms