Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RNU6-476P-201ENST00000384726 107 ntBASIC0.45□□□□□ -2.34
HMGB4Q8WW32 MIR516A2-201ENST00000384888 90 ntBASIC0.45□□□□□ -2.34
HMGB4Q8WW32 MIR516A1-201ENST00000385033 90 ntBASIC0.45□□□□□ -2.34
HMGB4Q8WW32 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.45□□□□□ -2.34
HMGB4Q8WW32 RNU6-789P-201ENST00000517105 102 ntBASIC0.45□□□□□ -2.34
HMGB4Q8WW32 AL109933.3-201ENST00000619095 188 ntBASIC0.45□□□□□ -2.34
HMGB4Q8WW32 RNY3P2-201ENST00000362918 102 ntBASIC0.44□□□□□ -2.34
HMGB4Q8WW32 Y_RNA.221-201ENST00000364248 96 ntBASIC0.44□□□□□ -2.34
HMGB4Q8WW32 Y_RNA.323-201ENST00000365157 109 ntBASIC0.44□□□□□ -2.34
HMGB4Q8WW32 RNU6-1154P-201ENST00000391001 104 ntBASIC0.44□□□□□ -2.34
HMGB4Q8WW32 MIR1197-201ENST00000408818 88 ntBASIC0.44□□□□□ -2.34
HMGB4Q8WW32 RNU6-313P-201ENST00000516317 112 ntBASIC0.44□□□□□ -2.34
HMGB4Q8WW32 RNU6-412P-201ENST00000516434 106 ntBASIC0.44□□□□□ -2.34
HMGB4Q8WW32 AC096720.1-201ENST00000604441 183 ntBASIC0.44□□□□□ -2.34
HMGB4Q8WW32 RNU6-832P-201ENST00000363319 107 ntBASIC0.43□□□□□ -2.34
HMGB4Q8WW32 RNU6-726P-201ENST00000364680 107 ntBASIC0.43□□□□□ -2.34
HMGB4Q8WW32 RNU2-59P-201ENST00000410482 191 ntBASIC0.43□□□□□ -2.34
HMGB4Q8WW32 RNU6-1064P-201ENST00000410626 104 ntBASIC0.43□□□□□ -2.34
HMGB4Q8WW32 RNU4-61P-201ENST00000411243 107 ntBASIC0.43□□□□□ -2.34
HMGB4Q8WW32 RNU7-104P-201ENST00000459398 79 ntBASIC0.43□□□□□ -2.34
HMGB4Q8WW32 RNU6-834P-201ENST00000362367 110 ntBASIC0.42□□□□□ -2.34
HMGB4Q8WW32 RNU6-1099P-201ENST00000363533 107 ntBASIC0.42□□□□□ -2.34
HMGB4Q8WW32 RNU6-1126P-201ENST00000384002 107 ntBASIC0.42□□□□□ -2.34
HMGB4Q8WW32 RNU6-406P-201ENST00000516470 107 ntBASIC0.42□□□□□ -2.34
HMGB4Q8WW32 Y_RNA.57-201ENST00000362806 113 ntBASIC0.41□□□□□ -2.34
HMGB4Q8WW32 RNU6-1254P-201ENST00000391266 104 ntBASIC0.41□□□□□ -2.34
HMGB4Q8WW32 RNU2-51P-201ENST00000410708 197 ntBASIC0.41□□□□□ -2.34
HMGB4Q8WW32 AC069271.1-201ENST00000445577 156 ntBASIC0.41□□□□□ -2.34
HMGB4Q8WW32 RNU6-863P-201ENST00000515989 104 ntBASIC0.41□□□□□ -2.34
HMGB4Q8WW32 AC067863.3-201ENST00000624172 122 ntBASIC0.41□□□□□ -2.34
HMGB4Q8WW32 MIR103A1-201ENST00000362165 78 ntBASIC0.4□□□□□ -2.35
HMGB4Q8WW32 RNU6-1163P-201ENST00000364516 107 ntBASIC0.4□□□□□ -2.35
HMGB4Q8WW32 RNU6-1107P-201ENST00000364817 104 ntBASIC0.4□□□□□ -2.35
HMGB4Q8WW32 RNU6-1014P-201ENST00000383940 103 ntBASIC0.4□□□□□ -2.35
HMGB4Q8WW32 RNU6-524P-201ENST00000384270 107 ntBASIC0.4□□□□□ -2.35
HMGB4Q8WW32 AL606753.1-201ENST00000427435 87 ntBASIC0.4□□□□□ -2.35
HMGB4Q8WW32 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.4□□□□□ -2.35
HMGB4Q8WW32 MIR3613-201ENST00000579844 87 ntBASIC0.4□□□□□ -2.35
HMGB4Q8WW32 MIR4514-201ENST00000581410 57 ntBASIC0.4□□□□□ -2.35
HMGB4Q8WW32 AC090625.1-201ENST00000357130 210 ntBASIC0.39□□□□□ -2.35
HMGB4Q8WW32 SNORD36A-201ENST00000362874 73 ntBASIC0.39□□□□□ -2.35
HMGB4Q8WW32 RNU6-1056P-201ENST00000383996 107 ntBASIC0.39□□□□□ -2.35
HMGB4Q8WW32 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
HMGB4Q8WW32 SNORD41.1-201ENST00000391000 69 ntBASIC0.39□□□□□ -2.35
HMGB4Q8WW32 MIR548L-201ENST00000408303 86 ntBASIC0.39□□□□□ -2.35
HMGB4Q8WW32 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.39□□□□□ -2.35
HMGB4Q8WW32 AC141557.1-201ENST00000540982 400 ntBASIC0.39□□□□□ -2.35
HMGB4Q8WW32 RNU6-243P-201ENST00000391140 107 ntBASIC0.38□□□□□ -2.35
HMGB4Q8WW32 RNU6-1265P-201ENST00000516342 103 ntBASIC0.38□□□□□ -2.35
HMGB4Q8WW32 MIR6129-201ENST00000616087 109 ntBASIC0.38□□□□□ -2.35
HMGB4Q8WW32 Y_RNA.659-201ENST00000515994 113 ntBASIC0.37□□□□□ -2.35
HMGB4Q8WW32 AL162376.1-201ENST00000624117 175 ntBASIC0.37□□□□□ -2.35
HMGB4Q8WW32 Y_RNA.163-201ENST00000363702 113 ntBASIC0.36□□□□□ -2.35
HMGB4Q8WW32 AC109327.2-201ENST00000448339 378 ntBASIC0.36□□□□□ -2.35
HMGB4Q8WW32 MIR6755-201ENST00000619993 66 ntBASIC0.36□□□□□ -2.35
HMGB4Q8WW32 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
HMGB4Q8WW32 RNA5SP257-201ENST00000363023 116 ntBASIC0.35□□□□□ -2.35
HMGB4Q8WW32 RNU6-1125P-201ENST00000363601 107 ntBASIC0.35□□□□□ -2.35
HMGB4Q8WW32 RNU6-1244P-201ENST00000363614 108 ntBASIC0.35□□□□□ -2.35
HMGB4Q8WW32 RNU6-1327P-201ENST00000365302 105 ntBASIC0.35□□□□□ -2.35
HMGB4Q8WW32 RNU6-480P-201ENST00000384332 107 ntBASIC0.35□□□□□ -2.35
HMGB4Q8WW32 RNU7-13P-201ENST00000516413 62 ntBASIC0.35□□□□□ -2.35
HMGB4Q8WW32 SNORA62.5-201ENST00000516634 120 ntBASIC0.35□□□□□ -2.35
HMGB4Q8WW32 MIR3920-201ENST00000581751 86 ntBASIC0.35□□□□□ -2.35
HMGB4Q8WW32 MIR4439-201ENST00000583746 80 ntBASIC0.35□□□□□ -2.35
HMGB4Q8WW32 Y_RNA.10-201ENST00000362371 110 ntBASIC0.34□□□□□ -2.36
HMGB4Q8WW32 RNU4-36P-201ENST00000364294 144 ntBASIC0.34□□□□□ -2.36
HMGB4Q8WW32 SNORD45B-201ENST00000364617 72 ntBASIC0.34□□□□□ -2.36
HMGB4Q8WW32 AC108740.1-201ENST00000498629 225 ntBASIC0.34□□□□□ -2.36
HMGB4Q8WW32 RNU6-848P-201ENST00000515948 107 ntBASIC0.34□□□□□ -2.36
HMGB4Q8WW32 RNU6-617P-201ENST00000516147 107 ntBASIC0.34□□□□□ -2.36
HMGB4Q8WW32 RNU6-473P-201ENST00000516164 107 ntBASIC0.34□□□□□ -2.36
HMGB4Q8WW32 RNU6-1049P-201ENST00000516414 107 ntBASIC0.34□□□□□ -2.36
HMGB4Q8WW32 RNU6-589P-201ENST00000516485 107 ntBASIC0.34□□□□□ -2.36
HMGB4Q8WW32 RNU6-86P-201ENST00000606534 107 ntBASIC0.34□□□□□ -2.36
HMGB4Q8WW32 Y_RNA.273-201ENST00000364703 102 ntBASIC0.33□□□□□ -2.36
HMGB4Q8WW32 MIR181B2-201ENST00000385004 89 ntBASIC0.33□□□□□ -2.36
HMGB4Q8WW32 Y_RNA.601-201ENST00000410500 113 ntBASIC0.33□□□□□ -2.36
HMGB4Q8WW32 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.33□□□□□ -2.36
HMGB4Q8WW32 MIR4752-201ENST00000579672 72 ntBASIC0.33□□□□□ -2.36
HMGB4Q8WW32 RNU1-29P-201ENST00000606574 126 ntBASIC0.33□□□□□ -2.36
HMGB4Q8WW32 Y_RNA.78-201ENST00000362970 110 ntBASIC0.32□□□□□ -2.36
HMGB4Q8WW32 Y_RNA.95-201ENST00000363079 95 ntBASIC0.32□□□□□ -2.36
HMGB4Q8WW32 RNA5SP62-201ENST00000363457 110 ntBASIC0.32□□□□□ -2.36
HMGB4Q8WW32 Y_RNA.423-201ENST00000384057 113 ntBASIC0.32□□□□□ -2.36
HMGB4Q8WW32 SNORA19-201ENST00000384737 128 ntBASIC0.32□□□□□ -2.36
HMGB4Q8WW32 RNU6-269P-201ENST00000391077 97 ntBASIC0.32□□□□□ -2.36
HMGB4Q8WW32 MIR2909-201ENST00000617113 69 ntBASIC0.32□□□□□ -2.36
HMGB4Q8WW32 TRDV1-202ENST00000621643 102 ntBASIC0.32□□□□□ -2.36
HMGB4Q8WW32 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
HMGB4Q8WW32 RNU6-904P-201ENST00000516206 101 ntBASIC0.31□□□□□ -2.36
HMGB4Q8WW32 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
HMGB4Q8WW32 SNORD115-44-201ENST00000365391 82 ntBASIC0.3□□□□□ -2.36
HMGB4Q8WW32 RNU6-1081P-201ENST00000384537 107 ntBASIC0.3□□□□□ -2.36
HMGB4Q8WW32 MIR1302-5-201ENST00000408164 150 ntBASIC0.3□□□□□ -2.36
HMGB4Q8WW32 AL161932.1-201ENST00000437408 146 ntBASIC0.3□□□□□ -2.36
HMGB4Q8WW32 AC023932.2-201ENST00000603176 175 ntBASIC0.3□□□□□ -2.36
HMGB4Q8WW32 RNU6-957P-201ENST00000363652 99 ntBASIC0.29□□□□□ -2.36
HMGB4Q8WW32 SNORA2A-201ENST00000383885 135 ntBASIC0.29□□□□□ -2.36
HMGB4Q8WW32 RNU6-815P-201ENST00000384080 113 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms