Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RNU6-1022P-201ENST00000365049 104 ntBASIC1.42□□□□□ -2.18
NUP43Q8NFH3 RNU6-535P-201ENST00000384722 107 ntBASIC1.42□□□□□ -2.18
NUP43Q8NFH3 MIR599-201ENST00000385069 95 ntBASIC1.42□□□□□ -2.18
NUP43Q8NFH3 MIR517C-201ENST00000385103 95 ntBASIC1.42□□□□□ -2.18
NUP43Q8NFH3 SNORD12-201ENST00000391002 90 ntBASIC1.42□□□□□ -2.18
NUP43Q8NFH3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
NUP43Q8NFH3 SNORD53B-201ENST00000577887 78 ntBASIC1.42□□□□□ -2.18
NUP43Q8NFH3 MIR4303-201ENST00000581299 66 ntBASIC1.42□□□□□ -2.18
NUP43Q8NFH3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
NUP43Q8NFH3 RNU6-392P-201ENST00000364926 101 ntBASIC1.41□□□□□ -2.18
NUP43Q8NFH3 SNORD90-201ENST00000391145 111 ntBASIC1.41□□□□□ -2.18
NUP43Q8NFH3 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
NUP43Q8NFH3 MIR1276-201ENST00000408707 83 ntBASIC1.41□□□□□ -2.18
NUP43Q8NFH3 RNU6-977P-201ENST00000516411 103 ntBASIC1.41□□□□□ -2.18
NUP43Q8NFH3 U6.100-201ENST00000636230 99 ntBASIC1.41□□□□□ -2.18
NUP43Q8NFH3 MIR4662A-201ENST00000637499 67 ntBASIC1.41□□□□□ -2.18
NUP43Q8NFH3 MIR100-201ENST00000385259 80 ntBASIC1.4□□□□□ -2.19
NUP43Q8NFH3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.4□□□□□ -2.19
NUP43Q8NFH3 MIR1827-201ENST00000408549 66 ntBASIC1.4□□□□□ -2.19
NUP43Q8NFH3 AC002429.1-201ENST00000437672 148 ntBASIC1.4□□□□□ -2.19
NUP43Q8NFH3 FGF7P7-201ENST00000514120 227 ntBASIC1.4□□□□□ -2.19
NUP43Q8NFH3 RNU6-1265P-201ENST00000516342 103 ntBASIC1.4□□□□□ -2.19
NUP43Q8NFH3 MTRNR2L2-201ENST00000604882 87 ntBASIC1.4□□□□□ -2.19
NUP43Q8NFH3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NUP43Q8NFH3 MIR1-1-201ENST00000362147 71 ntBASIC1.39□□□□□ -2.19
NUP43Q8NFH3 MIRLET7A1-201ENST00000362295 80 ntBASIC1.39□□□□□ -2.19
NUP43Q8NFH3 RNU6-161P-201ENST00000363051 106 ntBASIC1.39□□□□□ -2.19
NUP43Q8NFH3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.39□□□□□ -2.19
NUP43Q8NFH3 MIR7-2-201ENST00000384970 110 ntBASIC1.39□□□□□ -2.19
NUP43Q8NFH3 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
NUP43Q8NFH3 SNORA67.6-201ENST00000391093 99 ntBASIC1.39□□□□□ -2.19
NUP43Q8NFH3 AC244505.6-201ENST00000452829 130 ntBASIC1.39□□□□□ -2.19
NUP43Q8NFH3 RNU7-95P-201ENST00000459222 64 ntBASIC1.39□□□□□ -2.19
NUP43Q8NFH3 MIR4696-201ENST00000581431 70 ntBASIC1.39□□□□□ -2.19
NUP43Q8NFH3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
NUP43Q8NFH3 RNA5SP327-201ENST00000362494 101 ntBASIC1.38□□□□□ -2.19
NUP43Q8NFH3 RNU6-1229P-201ENST00000364295 107 ntBASIC1.38□□□□□ -2.19
NUP43Q8NFH3 RNU6-686P-201ENST00000364839 107 ntBASIC1.38□□□□□ -2.19
NUP43Q8NFH3 RNU6-42P-201ENST00000384165 107 ntBASIC1.38□□□□□ -2.19
NUP43Q8NFH3 RNU6-997P-201ENST00000384725 107 ntBASIC1.38□□□□□ -2.19
NUP43Q8NFH3 MIR520H-201ENST00000385126 88 ntBASIC1.38□□□□□ -2.19
NUP43Q8NFH3 RNU1-119P-201ENST00000391122 165 ntBASIC1.38□□□□□ -2.19
NUP43Q8NFH3 MIR889-201ENST00000401280 79 ntBASIC1.38□□□□□ -2.19
NUP43Q8NFH3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.38□□□□□ -2.19
NUP43Q8NFH3 RNU6-1108P-201ENST00000516308 104 ntBASIC1.38□□□□□ -2.19
NUP43Q8NFH3 RNU6-664P-201ENST00000362381 107 ntBASIC1.37□□□□□ -2.19
NUP43Q8NFH3 SNORD101-201ENST00000384027 73 ntBASIC1.37□□□□□ -2.19
NUP43Q8NFH3 MIR520F-201ENST00000384824 87 ntBASIC1.37□□□□□ -2.19
NUP43Q8NFH3 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
NUP43Q8NFH3 Y_RNA.660-201ENST00000516002 120 ntBASIC1.37□□□□□ -2.19
NUP43Q8NFH3 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
NUP43Q8NFH3 AL157834.3-201ENST00000615543 103 ntBASIC1.37□□□□□ -2.19
NUP43Q8NFH3 RMST_2.1-201ENST00000617263 136 ntBASIC1.37□□□□□ -2.19
NUP43Q8NFH3 Y_RNA.32-201ENST00000362589 110 ntBASIC1.36□□□□□ -2.19
NUP43Q8NFH3 RNU1-42P-201ENST00000364033 160 ntBASIC1.36□□□□□ -2.19
NUP43Q8NFH3 SNORA25-201ENST00000384384 134 ntBASIC1.36□□□□□ -2.19
NUP43Q8NFH3 AC145423.2-201ENST00000610631 239 ntBASIC1.36□□□□□ -2.19
NUP43Q8NFH3 uc_338.16-201ENST00000621804 95 ntBASIC1.36□□□□□ -2.19
NUP43Q8NFH3 RNU6-1094P-201ENST00000362416 104 ntBASIC1.35□□□□□ -2.19
NUP43Q8NFH3 Y_RNA.239-201ENST00000364444 113 ntBASIC1.35□□□□□ -2.19
NUP43Q8NFH3 MIR222-201ENST00000384992 110 ntBASIC1.35□□□□□ -2.19
NUP43Q8NFH3 Y_RNA.596-201ENST00000410462 109 ntBASIC1.35□□□□□ -2.19
NUP43Q8NFH3 AC067940.1-201ENST00000458411 300 ntBASIC1.35□□□□□ -2.19
NUP43Q8NFH3 RNU6-1051P-201ENST00000365471 102 ntBASIC1.34□□□□□ -2.19
NUP43Q8NFH3 Y_RNA.532-201ENST00000384590 113 ntBASIC1.34□□□□□ -2.19
NUP43Q8NFH3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
NUP43Q8NFH3 SNORD77.2-201ENST00000391045 68 ntBASIC1.34□□□□□ -2.19
NUP43Q8NFH3 RNA5SP220-201ENST00000516298 104 ntBASIC1.34□□□□□ -2.19
NUP43Q8NFH3 SNORA31.14-201ENST00000516728 116 ntBASIC1.34□□□□□ -2.19
NUP43Q8NFH3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
NUP43Q8NFH3 Y_RNA.540-201ENST00000384638 111 ntBASIC1.33□□□□□ -2.2
NUP43Q8NFH3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.33□□□□□ -2.2
NUP43Q8NFH3 RPS29P23-201ENST00000458635 123 ntBASIC1.33□□□□□ -2.2
NUP43Q8NFH3 Y_RNA.788-201ENST00000622394 112 ntBASIC1.33□□□□□ -2.2
NUP43Q8NFH3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NUP43Q8NFH3 snoU13.17-201ENST00000458802 104 ntBASIC1.32□□□□□ -2.2
NUP43Q8NFH3 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
NUP43Q8NFH3 MIR4452-201ENST00000583004 71 ntBASIC1.32□□□□□ -2.2
NUP43Q8NFH3 AL078603.1-201ENST00000603824 313 ntBASIC1.32□□□□□ -2.2
NUP43Q8NFH3 U7.4-201ENST00000614961 63 ntBASIC1.32□□□□□ -2.2
NUP43Q8NFH3 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.32□□□□□ -2.2
NUP43Q8NFH3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
NUP43Q8NFH3 RNU6-208P-201ENST00000362431 107 ntBASIC1.31□□□□□ -2.2
NUP43Q8NFH3 Y_RNA.174-201ENST00000363781 105 ntBASIC1.31□□□□□ -2.2
NUP43Q8NFH3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.31□□□□□ -2.2
NUP43Q8NFH3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
NUP43Q8NFH3 Y_RNA.207-201ENST00000364142 106 ntBASIC1.3□□□□□ -2.2
NUP43Q8NFH3 Y_RNA.264-201ENST00000364665 102 ntBASIC1.3□□□□□ -2.2
NUP43Q8NFH3 MIR19B1-201ENST00000384829 87 ntBASIC1.3□□□□□ -2.2
NUP43Q8NFH3 RNU6-935P-201ENST00000410371 100 ntBASIC1.3□□□□□ -2.2
NUP43Q8NFH3 SCARNA18B-201ENST00000458806 135 ntBASIC1.3□□□□□ -2.2
NUP43Q8NFH3 RNU1-123P-201ENST00000458950 160 ntBASIC1.3□□□□□ -2.2
NUP43Q8NFH3 MIR3140-201ENST00000583685 90 ntBASIC1.3□□□□□ -2.2
NUP43Q8NFH3 RNA5SP403-201ENST00000363598 108 ntBASIC1.29□□□□□ -2.2
NUP43Q8NFH3 SNORA7.1-201ENST00000363750 139 ntBASIC1.29□□□□□ -2.2
NUP43Q8NFH3 RNU6-380P-201ENST00000410207 107 ntBASIC1.29□□□□□ -2.2
NUP43Q8NFH3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.29□□□□□ -2.2
NUP43Q8NFH3 RNA5SP480-201ENST00000516840 109 ntBASIC1.29□□□□□ -2.2
NUP43Q8NFH3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.29□□□□□ -2.2
NUP43Q8NFH3 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 194.3 ms