Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RNU6-959P-201ENST00000384671 107 ntBASIC0.32□□□□□ -2.36
USP38Q8NB14 Y_RNA.649-201ENST00000459077 103 ntBASIC0.32□□□□□ -2.36
USP38Q8NB14 AC007012.1-201ENST00000567192 175 ntBASIC0.32□□□□□ -2.36
USP38Q8NB14 Y_RNA.35-201ENST00000362601 101 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 RNU6-170P-201ENST00000362832 104 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 Y_RNA.261-201ENST00000364631 102 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 SNORD114-15-201ENST00000364687 72 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 SNORD116-14-201ENST00000383894 92 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 SNORD116-17-201ENST00000383929 92 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 RNU6-571P-201ENST00000384128 107 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 SNORD116-15-201ENST00000384445 92 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 SNORD116-19-201ENST00000384729 92 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 MIR516A2-201ENST00000384888 90 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 MIR516A1-201ENST00000385033 90 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 SPINT5P-201ENST00000448174 155 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 MIR4752-201ENST00000579672 72 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 MIR6755-201ENST00000619993 66 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 Y_RNA.342-201ENST00000365352 113 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 AC097635.1-201ENST00000450678 155 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 RPL39P34-201ENST00000477141 156 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 RNU6-863P-201ENST00000515989 104 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 Y_RNA.809-201ENST00000516058 95 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 RNU7-129P-201ENST00000516128 62 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 RNU6-1333P-201ENST00000516162 93 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 RNU6-1018P-201ENST00000516577 106 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 RNU6-815P-201ENST00000384080 113 ntBASIC0.29□□□□□ -2.36
USP38Q8NB14 RNU6-1201P-201ENST00000384227 107 ntBASIC0.29□□□□□ -2.36
USP38Q8NB14 MIR519A1-201ENST00000385257 85 ntBASIC0.29□□□□□ -2.36
USP38Q8NB14 AC108740.1-201ENST00000498629 225 ntBASIC0.29□□□□□ -2.36
USP38Q8NB14 IGLVI-20-201ENST00000519296 130 ntBASIC0.29□□□□□ -2.36
USP38Q8NB14 MIR4679-2-201ENST00000578358 77 ntBASIC0.29□□□□□ -2.36
USP38Q8NB14 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.29□□□□□ -2.36
USP38Q8NB14 SNORD38.1-201ENST00000363863 68 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 Y_RNA.185-201ENST00000363894 100 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 RNA5SP368-201ENST00000364298 116 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 Y_RNA.353-201ENST00000365440 108 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 RNU6-81P-201ENST00000365608 104 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 RNU6-1126P-201ENST00000384002 107 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 MIR548G-201ENST00000408442 89 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 MIR4493-201ENST00000584016 73 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 RNU6-90P-201ENST00000606352 106 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 RNU1-29P-201ENST00000606574 126 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 AL365222.1-201ENST00000614661 98 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 AL442128.1-201ENST00000615151 90 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.27□□□□□ -2.37
USP38Q8NB14 RNU6-524P-201ENST00000384270 107 ntBASIC0.27□□□□□ -2.37
USP38Q8NB14 MIR577-201ENST00000385196 96 ntBASIC0.27□□□□□ -2.37
USP38Q8NB14 MIR548A3-201ENST00000385297 97 ntBASIC0.27□□□□□ -2.37
USP38Q8NB14 U6.95-201ENST00000636931 70 ntBASIC0.27□□□□□ -2.37
USP38Q8NB14 RNU6-1260P-201ENST00000362944 107 ntBASIC0.26□□□□□ -2.37
USP38Q8NB14 RNU6-1232P-201ENST00000516299 86 ntBASIC0.26□□□□□ -2.37
USP38Q8NB14 AC068339.1-201ENST00000526965 141 ntBASIC0.26□□□□□ -2.37
USP38Q8NB14 MIR3613-201ENST00000579844 87 ntBASIC0.26□□□□□ -2.37
USP38Q8NB14 Y_RNA.173-201ENST00000363776 113 ntBASIC0.25□□□□□ -2.37
USP38Q8NB14 Y_RNA.309-201ENST00000365046 111 ntBASIC0.25□□□□□ -2.37
USP38Q8NB14 SNORD41.1-201ENST00000391000 69 ntBASIC0.25□□□□□ -2.37
USP38Q8NB14 TMSB4XP3-201ENST00000445144 114 ntBASIC0.25□□□□□ -2.37
USP38Q8NB14 AL670379.3-201ENST00000605040 251 ntBASIC0.25□□□□□ -2.37
USP38Q8NB14 AL162376.1-201ENST00000624117 175 ntBASIC0.25□□□□□ -2.37
USP38Q8NB14 RNA5SP98-201ENST00000363158 137 ntBASIC0.24□□□□□ -2.37
USP38Q8NB14 U8.6-201ENST00000364939 135 ntBASIC0.24□□□□□ -2.37
USP38Q8NB14 MIR760-201ENST00000390220 80 ntBASIC0.24□□□□□ -2.37
USP38Q8NB14 RNU6-269P-201ENST00000391077 97 ntBASIC0.24□□□□□ -2.37
USP38Q8NB14 AL161932.1-201ENST00000437408 146 ntBASIC0.24□□□□□ -2.37
USP38Q8NB14 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
USP38Q8NB14 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.24□□□□□ -2.37
USP38Q8NB14 SNORA9.1-201ENST00000362412 131 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 SNORD36A-201ENST00000362874 73 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 SNORD95.1-201ENST00000364099 68 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 RNU6-1163P-201ENST00000364516 107 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 Y_RNA.323-201ENST00000365157 109 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 Y_RNA.563-201ENST00000384707 108 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.23□□□□□ -2.37
USP38Q8NB14 AC069113.3-201ENST00000521019 150 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 MIR3910-1-201ENST00000580936 111 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 MIR3920-201ENST00000581751 86 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 Y_RNA.57-201ENST00000362806 113 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 RNU6-832P-201ENST00000363319 107 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 RNU6-1254P-201ENST00000391266 104 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 RNU7-13P-201ENST00000516413 62 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 MIR5009-201ENST00000578736 100 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 AP001180.6-201ENST00000584918 159 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 AC108676.2-201ENST00000605225 163 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 SNORA70.25-201ENST00000612741 95 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 Y_RNA.377-201ENST00000365644 108 ntBASIC0.21□□□□□ -2.38
USP38Q8NB14 AC104692.1-201ENST00000472406 90 ntBASIC0.21□□□□□ -2.38
USP38Q8NB14 MIR4694-201ENST00000578534 80 ntBASIC0.21□□□□□ -2.38
USP38Q8NB14 RNU6-243P-201ENST00000391140 107 ntBASIC0.2□□□□□ -2.38
USP38Q8NB14 AC008267.6-201ENST00000441664 139 ntBASIC0.2□□□□□ -2.38
USP38Q8NB14 AC109327.2-201ENST00000448339 378 ntBASIC0.2□□□□□ -2.38
USP38Q8NB14 RNU6-1265P-201ENST00000516342 103 ntBASIC0.2□□□□□ -2.38
USP38Q8NB14 Y_RNA.281-201ENST00000364774 94 ntBASIC0.19□□□□□ -2.38
USP38Q8NB14 SNORD116-21-201ENST00000384507 92 ntBASIC0.19□□□□□ -2.38
USP38Q8NB14 MIR604-201ENST00000384880 94 ntBASIC0.19□□□□□ -2.38
USP38Q8NB14 MIR1295A-201ENST00000408463 79 ntBASIC0.19□□□□□ -2.38
USP38Q8NB14 RNA5SP266-201ENST00000410273 108 ntBASIC0.19□□□□□ -2.38
USP38Q8NB14 MIR548AG2-201ENST00000581228 64 ntBASIC0.19□□□□□ -2.38
USP38Q8NB14 MIR499B-201ENST00000636498 73 ntBASIC0.19□□□□□ -2.38
USP38Q8NB14 MIR4315-1-201ENST00000636800 73 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms