Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 RNU6-90P-201ENST00000606352 106 ntBASIC0.35□□□□□ -2.35
RAB42Q8N4Z0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.34□□□□□ -2.36
RAB42Q8N4Z0 Y_RNA.57-201ENST00000362806 113 ntBASIC0.34□□□□□ -2.36
RAB42Q8N4Z0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
RAB42Q8N4Z0 RNU6-1126P-201ENST00000384002 107 ntBASIC0.34□□□□□ -2.36
RAB42Q8N4Z0 MIR598-201ENST00000384868 97 ntBASIC0.34□□□□□ -2.36
RAB42Q8N4Z0 RNU6-554P-201ENST00000410466 106 ntBASIC0.34□□□□□ -2.36
RAB42Q8N4Z0 RNU6-863P-201ENST00000515989 104 ntBASIC0.34□□□□□ -2.36
RAB42Q8N4Z0 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.34□□□□□ -2.36
RAB42Q8N4Z0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.34□□□□□ -2.36
RAB42Q8N4Z0 uc_338.28-201ENST00000612082 187 ntBASIC0.34□□□□□ -2.36
RAB42Q8N4Z0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.34□□□□□ -2.36
RAB42Q8N4Z0 SNORD41.1-201ENST00000391000 69 ntBASIC0.33□□□□□ -2.36
RAB42Q8N4Z0 Y_RNA.659-201ENST00000515994 113 ntBASIC0.33□□□□□ -2.36
RAB42Q8N4Z0 RNU6-789P-201ENST00000517105 102 ntBASIC0.33□□□□□ -2.36
RAB42Q8N4Z0 RNU6-537P-201ENST00000517277 103 ntBASIC0.33□□□□□ -2.36
RAB42Q8N4Z0 AC141557.1-201ENST00000540982 400 ntBASIC0.33□□□□□ -2.36
RAB42Q8N4Z0 MIR548AG2-201ENST00000581228 64 ntBASIC0.33□□□□□ -2.36
RAB42Q8N4Z0 MIR3920-201ENST00000581751 86 ntBASIC0.33□□□□□ -2.36
RAB42Q8N4Z0 AC025521.1-201ENST00000621624 286 ntBASIC0.33□□□□□ -2.36
RAB42Q8N4Z0 AL162376.1-201ENST00000624117 175 ntBASIC0.33□□□□□ -2.36
RAB42Q8N4Z0 Y_RNA.467-201ENST00000384297 102 ntBASIC0.32□□□□□ -2.36
RAB42Q8N4Z0 RNU6-106P-201ENST00000384405 107 ntBASIC0.32□□□□□ -2.36
RAB42Q8N4Z0 RNU6-1232P-201ENST00000516299 86 ntBASIC0.32□□□□□ -2.36
RAB42Q8N4Z0 RNU6-795P-201ENST00000516323 103 ntBASIC0.32□□□□□ -2.36
RAB42Q8N4Z0 MIR4777-201ENST00000583710 86 ntBASIC0.32□□□□□ -2.36
RAB42Q8N4Z0 AC012531.4-201ENST00000616509 177 ntBASIC0.32□□□□□ -2.36
RAB42Q8N4Z0 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.32□□□□□ -2.36
RAB42Q8N4Z0 U6.100-201ENST00000636230 99 ntBASIC0.32□□□□□ -2.36
RAB42Q8N4Z0 RNU6-957P-201ENST00000363652 99 ntBASIC0.31□□□□□ -2.36
RAB42Q8N4Z0 Y_RNA.163-201ENST00000363702 113 ntBASIC0.31□□□□□ -2.36
RAB42Q8N4Z0 RNU6-1056P-201ENST00000383996 107 ntBASIC0.31□□□□□ -2.36
RAB42Q8N4Z0 MIR181B2-201ENST00000385004 89 ntBASIC0.31□□□□□ -2.36
RAB42Q8N4Z0 RNU6-1254P-201ENST00000391266 104 ntBASIC0.31□□□□□ -2.36
RAB42Q8N4Z0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.31□□□□□ -2.36
RAB42Q8N4Z0 snoU13.11-201ENST00000459219 104 ntBASIC0.31□□□□□ -2.36
RAB42Q8N4Z0 RNU6-904P-201ENST00000516206 101 ntBASIC0.31□□□□□ -2.36
RAB42Q8N4Z0 RNU6-86P-201ENST00000606534 107 ntBASIC0.31□□□□□ -2.36
RAB42Q8N4Z0 SNORA70.25-201ENST00000612741 95 ntBASIC0.31□□□□□ -2.36
RAB42Q8N4Z0 RNU6-834P-201ENST00000362367 110 ntBASIC0.3□□□□□ -2.36
RAB42Q8N4Z0 RNU6-269P-201ENST00000391077 97 ntBASIC0.3□□□□□ -2.36
RAB42Q8N4Z0 RNU2-59P-201ENST00000410482 191 ntBASIC0.3□□□□□ -2.36
RAB42Q8N4Z0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.3□□□□□ -2.36
RAB42Q8N4Z0 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
RAB42Q8N4Z0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.3□□□□□ -2.36
RAB42Q8N4Z0 AC067863.3-201ENST00000624172 122 ntBASIC0.3□□□□□ -2.36
RAB42Q8N4Z0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
RAB42Q8N4Z0 RNU6-1290P-201ENST00000362957 109 ntBASIC0.29□□□□□ -2.36
RAB42Q8N4Z0 Y_RNA.78-201ENST00000362970 110 ntBASIC0.29□□□□□ -2.36
RAB42Q8N4Z0 Y_RNA.95-201ENST00000363079 95 ntBASIC0.29□□□□□ -2.36
RAB42Q8N4Z0 SNORD114-23-201ENST00000363536 72 ntBASIC0.29□□□□□ -2.36
RAB42Q8N4Z0 Y_RNA.273-201ENST00000364703 102 ntBASIC0.29□□□□□ -2.36
RAB42Q8N4Z0 RNU6-815P-201ENST00000384080 113 ntBASIC0.29□□□□□ -2.36
RAB42Q8N4Z0 RNA5SP193-201ENST00000410353 107 ntBASIC0.29□□□□□ -2.36
RAB42Q8N4Z0 RNA5SP436-201ENST00000516020 115 ntBASIC0.29□□□□□ -2.36
RAB42Q8N4Z0 RNU6-412P-201ENST00000516434 106 ntBASIC0.29□□□□□ -2.36
RAB42Q8N4Z0 Y_RNA.709-201ENST00000516952 92 ntBASIC0.29□□□□□ -2.36
RAB42Q8N4Z0 AC096720.1-201ENST00000604441 183 ntBASIC0.29□□□□□ -2.36
RAB42Q8N4Z0 TRDV1-202ENST00000621643 102 ntBASIC0.29□□□□□ -2.36
RAB42Q8N4Z0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.28□□□□□ -2.36
RAB42Q8N4Z0 MIR590-201ENST00000385008 97 ntBASIC0.28□□□□□ -2.36
RAB42Q8N4Z0 MIR216A-201ENST00000385063 110 ntBASIC0.28□□□□□ -2.36
RAB42Q8N4Z0 RNY4P18-201ENST00000391107 89 ntBASIC0.28□□□□□ -2.36
RAB42Q8N4Z0 Y_RNA.118-201ENST00000363300 101 ntBASIC0.27□□□□□ -2.37
RAB42Q8N4Z0 RNA5SP62-201ENST00000363457 110 ntBASIC0.27□□□□□ -2.37
RAB42Q8N4Z0 RNU6-243P-201ENST00000391140 107 ntBASIC0.27□□□□□ -2.37
RAB42Q8N4Z0 MIR548L-201ENST00000408303 86 ntBASIC0.27□□□□□ -2.37
RAB42Q8N4Z0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.27□□□□□ -2.37
RAB42Q8N4Z0 RNU7-13P-201ENST00000516413 62 ntBASIC0.27□□□□□ -2.37
RAB42Q8N4Z0 AL513043.2-201ENST00000573941 143 ntBASIC0.27□□□□□ -2.37
RAB42Q8N4Z0 AC103810.7-201ENST00000607821 91 ntBASIC0.27□□□□□ -2.37
RAB42Q8N4Z0 SNORD45B-201ENST00000364617 72 ntBASIC0.26□□□□□ -2.37
RAB42Q8N4Z0 RNU6-1325P-201ENST00000364905 105 ntBASIC0.26□□□□□ -2.37
RAB42Q8N4Z0 RNA5SP484-201ENST00000458857 111 ntBASIC0.26□□□□□ -2.37
RAB42Q8N4Z0 RNU6-109P-201ENST00000516364 107 ntBASIC0.26□□□□□ -2.37
RAB42Q8N4Z0 RNU6-184P-201ENST00000516514 107 ntBASIC0.26□□□□□ -2.37
RAB42Q8N4Z0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
RAB42Q8N4Z0 Y_RNA.283-201ENST00000364798 112 ntBASIC0.25□□□□□ -2.37
RAB42Q8N4Z0 Y_RNA.601-201ENST00000410500 113 ntBASIC0.25□□□□□ -2.37
RAB42Q8N4Z0 RNU7-85P-201ENST00000458851 63 ntBASIC0.25□□□□□ -2.37
RAB42Q8N4Z0 RNU6-75P-201ENST00000515944 104 ntBASIC0.25□□□□□ -2.37
RAB42Q8N4Z0 MTRNR2L2-201ENST00000604882 87 ntBASIC0.25□□□□□ -2.37
RAB42Q8N4Z0 RNU4-36P-201ENST00000364294 144 ntBASIC0.24□□□□□ -2.37
RAB42Q8N4Z0 RNU6-215P-201ENST00000365169 102 ntBASIC0.24□□□□□ -2.37
RAB42Q8N4Z0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
RAB42Q8N4Z0 SNORA2A-201ENST00000383885 135 ntBASIC0.24□□□□□ -2.37
RAB42Q8N4Z0 RNU6-813P-201ENST00000384691 107 ntBASIC0.24□□□□□ -2.37
RAB42Q8N4Z0 MIR519E-201ENST00000385075 84 ntBASIC0.24□□□□□ -2.37
RAB42Q8N4Z0 MIR760-201ENST00000390220 80 ntBASIC0.24□□□□□ -2.37
RAB42Q8N4Z0 Y_RNA.629-201ENST00000411368 105 ntBASIC0.24□□□□□ -2.37
RAB42Q8N4Z0 AC073261.1-201ENST00000429409 121 ntBASIC0.24□□□□□ -2.37
RAB42Q8N4Z0 SCARNA23-201ENST00000516060 130 ntBASIC0.24□□□□□ -2.37
RAB42Q8N4Z0 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
RAB42Q8N4Z0 MIR4439-201ENST00000583746 80 ntBASIC0.24□□□□□ -2.37
RAB42Q8N4Z0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.24□□□□□ -2.37
RAB42Q8N4Z0 MIR450A1-201ENST00000362262 91 ntBASIC0.23□□□□□ -2.37
RAB42Q8N4Z0 SNORA51.5-201ENST00000384126 131 ntBASIC0.23□□□□□ -2.37
RAB42Q8N4Z0 Y_RNA.466-201ENST00000384294 113 ntBASIC0.23□□□□□ -2.37
RAB42Q8N4Z0 SNORD20-201ENST00000384550 80 ntBASIC0.23□□□□□ -2.37
RAB42Q8N4Z0 MIR501-201ENST00000390204 84 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms