Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
HERC6Q8IVU3 AC243829.6-201ENST00000612652 106 ntBASIC0.58□□□□□ -2.32
HERC6Q8IVU3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.57□□□□□ -2.32
HERC6Q8IVU3 SNORA36.1-201ENST00000363424 132 ntBASIC0.57□□□□□ -2.32
HERC6Q8IVU3 MIR516A2-201ENST00000384888 90 ntBASIC0.57□□□□□ -2.32
HERC6Q8IVU3 MIR516A1-201ENST00000385033 90 ntBASIC0.57□□□□□ -2.32
HERC6Q8IVU3 RNU6-554P-201ENST00000410466 106 ntBASIC0.57□□□□□ -2.32
HERC6Q8IVU3 SNORD63B-201ENST00000411005 70 ntBASIC0.57□□□□□ -2.32
HERC6Q8IVU3 SNORD71-201ENST00000411292 86 ntBASIC0.57□□□□□ -2.32
HERC6Q8IVU3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.57□□□□□ -2.32
HERC6Q8IVU3 AC141557.1-201ENST00000540982 400 ntBASIC0.57□□□□□ -2.32
HERC6Q8IVU3 MIR2909-201ENST00000617113 69 ntBASIC0.57□□□□□ -2.32
HERC6Q8IVU3 AC091304.10-201ENST00000641554 121 ntBASIC0.57□□□□□ -2.32
HERC6Q8IVU3 RNU6-170P-201ENST00000362832 104 ntBASIC0.56□□□□□ -2.32
HERC6Q8IVU3 Y_RNA.163-201ENST00000363702 113 ntBASIC0.56□□□□□ -2.32
HERC6Q8IVU3 Y_RNA.342-201ENST00000365352 113 ntBASIC0.56□□□□□ -2.32
HERC6Q8IVU3 AC109327.2-201ENST00000448339 378 ntBASIC0.56□□□□□ -2.32
HERC6Q8IVU3 AC244505.6-201ENST00000452829 130 ntBASIC0.56□□□□□ -2.32
HERC6Q8IVU3 RNA5SP94-201ENST00000516917 108 ntBASIC0.56□□□□□ -2.32
HERC6Q8IVU3 RNU6-537P-201ENST00000517277 103 ntBASIC0.56□□□□□ -2.32
HERC6Q8IVU3 AC138869.1-201ENST00000568623 124 ntBASIC0.56□□□□□ -2.32
HERC6Q8IVU3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
HERC6Q8IVU3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.55□□□□□ -2.32
HERC6Q8IVU3 SNORD28-201ENST00000384706 75 ntBASIC0.55□□□□□ -2.32
HERC6Q8IVU3 Y_RNA.567-201ENST00000384736 106 ntBASIC0.55□□□□□ -2.32
HERC6Q8IVU3 RNU7-195P-201ENST00000458793 62 ntBASIC0.55□□□□□ -2.32
HERC6Q8IVU3 RNU6-904P-201ENST00000516206 101 ntBASIC0.55□□□□□ -2.32
HERC6Q8IVU3 MIR548Z-201ENST00000584743 97 ntBASIC0.55□□□□□ -2.32
HERC6Q8IVU3 RNU6-86P-201ENST00000606534 107 ntBASIC0.55□□□□□ -2.32
HERC6Q8IVU3 RNU7-10P-201ENST00000607194 63 ntBASIC0.55□□□□□ -2.32
HERC6Q8IVU3 uc_338.28-201ENST00000612082 187 ntBASIC0.55□□□□□ -2.32
HERC6Q8IVU3 RNA5SP517-201ENST00000364724 117 ntBASIC0.54□□□□□ -2.32
HERC6Q8IVU3 MIR519A1-201ENST00000385257 85 ntBASIC0.54□□□□□ -2.32
HERC6Q8IVU3 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
HERC6Q8IVU3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.54□□□□□ -2.32
HERC6Q8IVU3 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
HERC6Q8IVU3 AC244669.1-204ENST00000621564 178 ntBASIC0.54□□□□□ -2.32
HERC6Q8IVU3 Y_RNA.78-201ENST00000362970 110 ntBASIC0.53□□□□□ -2.32
HERC6Q8IVU3 Y_RNA.221-201ENST00000364248 96 ntBASIC0.53□□□□□ -2.32
HERC6Q8IVU3 RNU6-1229P-201ENST00000364295 107 ntBASIC0.53□□□□□ -2.32
HERC6Q8IVU3 MIR590-201ENST00000385008 97 ntBASIC0.53□□□□□ -2.32
HERC6Q8IVU3 Y_RNA.601-201ENST00000410500 113 ntBASIC0.53□□□□□ -2.32
HERC6Q8IVU3 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
HERC6Q8IVU3 Y_RNA.659-201ENST00000515994 113 ntBASIC0.53□□□□□ -2.32
HERC6Q8IVU3 RNU6-795P-201ENST00000516323 103 ntBASIC0.53□□□□□ -2.32
HERC6Q8IVU3 RNA5SP47-201ENST00000517230 109 ntBASIC0.53□□□□□ -2.32
HERC6Q8IVU3 RNU7-161P-201ENST00000517289 62 ntBASIC0.53□□□□□ -2.32
HERC6Q8IVU3 MIR4777-201ENST00000583710 86 ntBASIC0.53□□□□□ -2.32
HERC6Q8IVU3 AC096720.1-201ENST00000604441 183 ntBASIC0.53□□□□□ -2.32
HERC6Q8IVU3 AC012531.4-201ENST00000616509 177 ntBASIC0.53□□□□□ -2.32
HERC6Q8IVU3 SNORD36A-201ENST00000362874 73 ntBASIC0.52□□□□□ -2.33
HERC6Q8IVU3 SNORD115-24-201ENST00000363528 82 ntBASIC0.52□□□□□ -2.33
HERC6Q8IVU3 MIR599-201ENST00000385069 95 ntBASIC0.52□□□□□ -2.33
HERC6Q8IVU3 MIR1302-5-201ENST00000408164 150 ntBASIC0.52□□□□□ -2.33
HERC6Q8IVU3 SNORA40.8-201ENST00000411034 126 ntBASIC0.52□□□□□ -2.33
HERC6Q8IVU3 Y_RNA.809-201ENST00000516058 95 ntBASIC0.52□□□□□ -2.33
HERC6Q8IVU3 RNU6-919P-201ENST00000516731 104 ntBASIC0.52□□□□□ -2.33
HERC6Q8IVU3 MIR4639-201ENST00000584938 69 ntBASIC0.52□□□□□ -2.33
HERC6Q8IVU3 SNORA63.4-201ENST00000362763 126 ntBASIC0.51□□□□□ -2.33
HERC6Q8IVU3 Y_RNA.95-201ENST00000363079 95 ntBASIC0.51□□□□□ -2.33
HERC6Q8IVU3 RNU4-36P-201ENST00000364294 144 ntBASIC0.51□□□□□ -2.33
HERC6Q8IVU3 RNU6-44P-201ENST00000384045 107 ntBASIC0.51□□□□□ -2.33
HERC6Q8IVU3 Y_RNA.467-201ENST00000384297 102 ntBASIC0.51□□□□□ -2.33
HERC6Q8IVU3 MIR181B2-201ENST00000385004 89 ntBASIC0.51□□□□□ -2.33
HERC6Q8IVU3 AC097635.1-201ENST00000450678 155 ntBASIC0.51□□□□□ -2.33
HERC6Q8IVU3 RNU6-109P-201ENST00000516364 107 ntBASIC0.51□□□□□ -2.33
HERC6Q8IVU3 RNU6-184P-201ENST00000516514 107 ntBASIC0.51□□□□□ -2.33
HERC6Q8IVU3 RNA5SP395-201ENST00000516567 118 ntBASIC0.51□□□□□ -2.33
HERC6Q8IVU3 MIR6828-201ENST00000636181 60 ntBASIC0.51□□□□□ -2.33
HERC6Q8IVU3 Y_RNA.57-201ENST00000362806 113 ntBASIC0.5□□□□□ -2.33
HERC6Q8IVU3 RNU6-1260P-201ENST00000362944 107 ntBASIC0.5□□□□□ -2.33
HERC6Q8IVU3 RNA5SP403-201ENST00000363598 108 ntBASIC0.5□□□□□ -2.33
HERC6Q8IVU3 RNU6-1244P-201ENST00000363614 108 ntBASIC0.5□□□□□ -2.33
HERC6Q8IVU3 RNU6-755P-201ENST00000364400 103 ntBASIC0.5□□□□□ -2.33
HERC6Q8IVU3 SNORA51.5-201ENST00000384126 131 ntBASIC0.5□□□□□ -2.33
HERC6Q8IVU3 RNU6-1254P-201ENST00000391266 104 ntBASIC0.5□□□□□ -2.33
HERC6Q8IVU3 AL035461.1-201ENST00000421490 332 ntBASIC0.5□□□□□ -2.33
HERC6Q8IVU3 SCARNA23-201ENST00000516060 130 ntBASIC0.5□□□□□ -2.33
HERC6Q8IVU3 MIR450A1-201ENST00000362262 91 ntBASIC0.49□□□□□ -2.33
HERC6Q8IVU3 SNORD45B-201ENST00000364617 72 ntBASIC0.49□□□□□ -2.33
HERC6Q8IVU3 RNU6-756P-201ENST00000383997 107 ntBASIC0.49□□□□□ -2.33
HERC6Q8IVU3 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
HERC6Q8IVU3 SNORA8.2-201ENST00000384372 139 ntBASIC0.49□□□□□ -2.33
HERC6Q8IVU3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.49□□□□□ -2.33
HERC6Q8IVU3 MIR4514-201ENST00000581410 57 ntBASIC0.49□□□□□ -2.33
HERC6Q8IVU3 AC025521.1-201ENST00000621624 286 ntBASIC0.49□□□□□ -2.33
HERC6Q8IVU3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.49□□□□□ -2.33
HERC6Q8IVU3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HERC6Q8IVU3 Y_RNA.10-201ENST00000362371 110 ntBASIC0.48□□□□□ -2.33
HERC6Q8IVU3 RNU6-524P-201ENST00000384270 107 ntBASIC0.48□□□□□ -2.33
HERC6Q8IVU3 AL161932.1-201ENST00000437408 146 ntBASIC0.48□□□□□ -2.33
HERC6Q8IVU3 RNA5SP268-201ENST00000516828 124 ntBASIC0.48□□□□□ -2.33
HERC6Q8IVU3 MIR4439-201ENST00000583746 80 ntBASIC0.48□□□□□ -2.33
HERC6Q8IVU3 SNORA25.18-201ENST00000607153 114 ntBASIC0.48□□□□□ -2.33
HERC6Q8IVU3 AC090625.1-201ENST00000357130 210 ntBASIC0.47□□□□□ -2.33
HERC6Q8IVU3 SNORD118-201ENST00000363593 134 ntBASIC0.47□□□□□ -2.33
HERC6Q8IVU3 RNU6-1125P-201ENST00000363601 107 ntBASIC0.47□□□□□ -2.33
HERC6Q8IVU3 RNU6-480P-201ENST00000384332 107 ntBASIC0.47□□□□□ -2.33
HERC6Q8IVU3 MIR518A1-201ENST00000385068 85 ntBASIC0.47□□□□□ -2.33
HERC6Q8IVU3 SNORA62.5-201ENST00000516634 120 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 225.5 ms