Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SNORA40.6-201ENST00000391153 128 ntBASIC2.33□□□□□ -2.04
RC3H1Q5TC82 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.33□□□□□ -2.04
RC3H1Q5TC82 AC079150.2-201ENST00000443733 78 ntBASIC2.33□□□□□ -2.04
RC3H1Q5TC82 RNU6-274P-201ENST00000459566 107 ntBASIC2.33□□□□□ -2.04
RC3H1Q5TC82 U3.27-201ENST00000391237 200 ntBASIC2.32□□□□□ -2.04
RC3H1Q5TC82 AC025033.1-201ENST00000463883 194 ntBASIC2.32□□□□□ -2.04
RC3H1Q5TC82 MIR8081-201ENST00000611533 95 ntBASIC2.32□□□□□ -2.04
RC3H1Q5TC82 AL359851.1-201ENST00000569460 4997 ntBASIC2.32□□□□□ -2.04
RC3H1Q5TC82 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RC3H1Q5TC82 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RC3H1Q5TC82 RNA5SP160-201ENST00000364866 120 ntBASIC2.31□□□□□ -2.04
RC3H1Q5TC82 RNU6-382P-201ENST00000365181 106 ntBASIC2.31□□□□□ -2.04
RC3H1Q5TC82 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RC3H1Q5TC82 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.31□□□□□ -2.04
RC3H1Q5TC82 RNU6-1057P-201ENST00000517162 102 ntBASIC2.31□□□□□ -2.04
RC3H1Q5TC82 MIR8070-201ENST00000616510 88 ntBASIC2.31□□□□□ -2.04
RC3H1Q5TC82 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RC3H1Q5TC82 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.3□□□□□ -2.04
RC3H1Q5TC82 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
RC3H1Q5TC82 Y_RNA.258-201ENST00000364613 105 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 MIR676-201ENST00000390702 67 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 SNORD83.1-201ENST00000411362 77 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 AC244098.3-201ENST00000424803 96 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 HMGN2P19-201ENST00000425149 265 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 TRMT112P2-201ENST00000512910 132 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 MIR4303-201ENST00000581299 66 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 AL109933.3-201ENST00000619095 188 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RC3H1Q5TC82 RNA5SP276-201ENST00000362580 94 ntBASIC2.29□□□□□ -2.04
RC3H1Q5TC82 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RC3H1Q5TC82 AL096840.1-201ENST00000603287 93 ntBASIC2.29□□□□□ -2.04
RC3H1Q5TC82 RNU6-934P-201ENST00000365154 107 ntBASIC2.28□□□□□ -2.04
RC3H1Q5TC82 MIR125B2-201ENST00000385128 89 ntBASIC2.28□□□□□ -2.04
RC3H1Q5TC82 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
RC3H1Q5TC82 RNU6-287P-201ENST00000516230 98 ntBASIC2.28□□□□□ -2.04
RC3H1Q5TC82 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.28□□□□□ -2.04
RC3H1Q5TC82 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
RC3H1Q5TC82 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RC3H1Q5TC82 RNU6-1187P-201ENST00000364771 110 ntBASIC2.27□□□□□ -2.05
RC3H1Q5TC82 RNU4-52P-201ENST00000384209 138 ntBASIC2.27□□□□□ -2.05
RC3H1Q5TC82 MIR499A-201ENST00000384903 122 ntBASIC2.27□□□□□ -2.05
RC3H1Q5TC82 RNA5SP245-201ENST00000364239 121 ntBASIC2.26□□□□□ -2.05
RC3H1Q5TC82 RNU6-977P-201ENST00000516411 103 ntBASIC2.26□□□□□ -2.05
RC3H1Q5TC82 AL645939.4-201ENST00000604495 135 ntBASIC2.26□□□□□ -2.05
RC3H1Q5TC82 MIR502-201ENST00000606349 86 ntBASIC2.26□□□□□ -2.05
RC3H1Q5TC82 SNORD113.3-201ENST00000364630 78 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 RNU6-535P-201ENST00000384722 107 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 RNU6-982P-201ENST00000516216 102 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 RNU1-40P-201ENST00000516816 164 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 RNU1-97P-201ENST00000516872 164 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 MIR4299-201ENST00000577899 72 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 AL078603.1-201ENST00000603824 313 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 MIR8074-201ENST00000615081 81 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RC3H1Q5TC82 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.25□□□□□ -2.05
RC3H1Q5TC82 AL691482.2-201ENST00000457453 84 ntBASIC2.24□□□□□ -2.05
RC3H1Q5TC82 RNU7-95P-201ENST00000459222 64 ntBASIC2.24□□□□□ -2.05
RC3H1Q5TC82 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.24□□□□□ -2.05
RC3H1Q5TC82 MIR3664-201ENST00000579074 99 ntBASIC2.24□□□□□ -2.05
RC3H1Q5TC82 SNORD115-44-201ENST00000365391 82 ntBASIC2.23□□□□□ -2.05
RC3H1Q5TC82 RNA5SP489-201ENST00000410986 109 ntBASIC2.23□□□□□ -2.05
RC3H1Q5TC82 MIR4771-2-201ENST00000577758 74 ntBASIC2.23□□□□□ -2.05
RC3H1Q5TC82 MIR4771-1-201ENST00000582617 74 ntBASIC2.23□□□□□ -2.05
RC3H1Q5TC82 AL773524.1-201ENST00000614065 229 ntBASIC2.23□□□□□ -2.05
RC3H1Q5TC82 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RC3H1Q5TC82 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RC3H1Q5TC82 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
RC3H1Q5TC82 AC244505.6-201ENST00000452829 130 ntBASIC2.22□□□□□ -2.05
RC3H1Q5TC82 AC008608.1-201ENST00000603910 127 ntBASIC2.22□□□□□ -2.05
RC3H1Q5TC82 MIR8063-201ENST00000621930 81 ntBASIC2.22□□□□□ -2.05
RC3H1Q5TC82 Y_RNA.355-201ENST00000365462 98 ntBASIC2.21□□□□□ -2.06
RC3H1Q5TC82 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.21□□□□□ -2.06
RC3H1Q5TC82 MTND4LP1-201ENST00000446263 157 ntBASIC2.21□□□□□ -2.06
RC3H1Q5TC82 AC036111.3-201ENST00000526389 112 ntBASIC2.21□□□□□ -2.06
RC3H1Q5TC82 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.21□□□□□ -2.06
RC3H1Q5TC82 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
RC3H1Q5TC82 RNU6-668P-201ENST00000364180 107 ntBASIC2.2□□□□□ -2.06
RC3H1Q5TC82 SNORA16.1-201ENST00000364597 132 ntBASIC2.2□□□□□ -2.06
RC3H1Q5TC82 SNORD75.2-201ENST00000408784 58 ntBASIC2.2□□□□□ -2.06
RC3H1Q5TC82 RNA5SP338-201ENST00000410495 85 ntBASIC2.2□□□□□ -2.06
RC3H1Q5TC82 RNU7-24P-201ENST00000458867 62 ntBASIC2.2□□□□□ -2.06
RC3H1Q5TC82 RNU6-829P-201ENST00000363700 112 ntBASIC2.19□□□□□ -2.06
RC3H1Q5TC82 Y_RNA.330-201ENST00000365230 109 ntBASIC2.19□□□□□ -2.06
RC3H1Q5TC82 MIR3920-201ENST00000581751 86 ntBASIC2.19□□□□□ -2.06
RC3H1Q5TC82 AC103810.8-201ENST00000607347 118 ntBASIC2.19□□□□□ -2.06
RC3H1Q5TC82 uc_338.20-201ENST00000621563 178 ntBASIC2.19□□□□□ -2.06
RC3H1Q5TC82 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.19□□□□□ -2.06
RC3H1Q5TC82 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RC3H1Q5TC82 MIR302D-201ENST00000362275 68 ntBASIC2.18□□□□□ -2.06
RC3H1Q5TC82 RNA5SP37-201ENST00000365420 130 ntBASIC2.18□□□□□ -2.06
RC3H1Q5TC82 RPS26P5-201ENST00000418544 335 ntBASIC2.18□□□□□ -2.06
RC3H1Q5TC82 RNU6-542P-201ENST00000516405 103 ntBASIC2.18□□□□□ -2.06
RC3H1Q5TC82 MIR4713-201ENST00000582691 75 ntBASIC2.18□□□□□ -2.06
RC3H1Q5TC82 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RC3H1Q5TC82 RNU6-495P-201ENST00000362995 107 ntBASIC2.17□□□□□ -2.06
RC3H1Q5TC82 Y_RNA.236-201ENST00000364427 111 ntBASIC2.17□□□□□ -2.06
RC3H1Q5TC82 RNU6-1039P-201ENST00000383931 107 ntBASIC2.17□□□□□ -2.06
RC3H1Q5TC82 RNU6-364P-201ENST00000384387 107 ntBASIC2.17□□□□□ -2.06
RC3H1Q5TC82 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.17□□□□□ -2.06
RC3H1Q5TC82 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms