Protein–RNA interactions for Protein: Q15042

RAB3GAP1, Rab3 GTPase-activating protein catalytic subunit, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1Q15042 Y_RNA.491-201ENST00000384417 107 ntBASIC1.51□□□□□ -2.17
RAB3GAP1Q15042 MIR518E-201ENST00000385252 88 ntBASIC1.51□□□□□ -2.17
RAB3GAP1Q15042 Y_RNA.809-201ENST00000516058 95 ntBASIC1.51□□□□□ -2.17
RAB3GAP1Q15042 RNA5SP102-201ENST00000516865 106 ntBASIC1.51□□□□□ -2.17
RAB3GAP1Q15042 RNU6-448P-201ENST00000517052 107 ntBASIC1.51□□□□□ -2.17
RAB3GAP1Q15042 RNU7-156P-201ENST00000517214 74 ntBASIC1.51□□□□□ -2.17
RAB3GAP1Q15042 MIR4676-201ENST00000583078 72 ntBASIC1.51□□□□□ -2.17
RAB3GAP1Q15042 RNU7-10P-201ENST00000607194 63 ntBASIC1.51□□□□□ -2.17
RAB3GAP1Q15042 AC145423.2-201ENST00000610631 239 ntBASIC1.51□□□□□ -2.17
RAB3GAP1Q15042 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.51□□□□□ -2.17
RAB3GAP1Q15042 MIR548U-201ENST00000390728 81 ntBASIC1.5□□□□□ -2.17
RAB3GAP1Q15042 AL591704.2-201ENST00000421658 181 ntBASIC1.5□□□□□ -2.17
RAB3GAP1Q15042 Y_RNA.697-201ENST00000516776 113 ntBASIC1.5□□□□□ -2.17
RAB3GAP1Q15042 TRDV1-202ENST00000621643 102 ntBASIC1.5□□□□□ -2.17
RAB3GAP1Q15042 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
RAB3GAP1Q15042 RNU6-161P-201ENST00000363051 106 ntBASIC1.49□□□□□ -2.17
RAB3GAP1Q15042 MIR150-201ENST00000385048 84 ntBASIC1.49□□□□□ -2.17
RAB3GAP1Q15042 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.49□□□□□ -2.17
RAB3GAP1Q15042 RNU6-910P-201ENST00000390844 107 ntBASIC1.49□□□□□ -2.17
RAB3GAP1Q15042 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RAB3GAP1Q15042 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.49□□□□□ -2.17
RAB3GAP1Q15042 RNU6-955P-201ENST00000410497 104 ntBASIC1.49□□□□□ -2.17
RAB3GAP1Q15042 FGF7P7-201ENST00000514120 227 ntBASIC1.49□□□□□ -2.17
RAB3GAP1Q15042 RNU6-1108P-201ENST00000516308 104 ntBASIC1.49□□□□□ -2.17
RAB3GAP1Q15042 MIR6504-201ENST00000613520 61 ntBASIC1.49□□□□□ -2.17
RAB3GAP1Q15042 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.49□□□□□ -2.17
RAB3GAP1Q15042 Y_RNA.788-201ENST00000622394 112 ntBASIC1.49□□□□□ -2.17
RAB3GAP1Q15042 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.48□□□□□ -2.17
RAB3GAP1Q15042 RNA5SP245-201ENST00000364239 121 ntBASIC1.48□□□□□ -2.17
RAB3GAP1Q15042 Y_RNA.224-201ENST00000364308 111 ntBASIC1.48□□□□□ -2.17
RAB3GAP1Q15042 RNU6-686P-201ENST00000364839 107 ntBASIC1.48□□□□□ -2.17
RAB3GAP1Q15042 SNORA80D-201ENST00000384488 135 ntBASIC1.48□□□□□ -2.17
RAB3GAP1Q15042 MIR520H-201ENST00000385126 88 ntBASIC1.48□□□□□ -2.17
RAB3GAP1Q15042 SNORD79.1-201ENST00000516069 84 ntBASIC1.48□□□□□ -2.17
RAB3GAP1Q15042 RNU6-1094P-201ENST00000362416 104 ntBASIC1.47□□□□□ -2.17
RAB3GAP1Q15042 Y_RNA.532-201ENST00000384590 113 ntBASIC1.47□□□□□ -2.17
RAB3GAP1Q15042 AC097635.1-201ENST00000450678 155 ntBASIC1.47□□□□□ -2.17
RAB3GAP1Q15042 U6.100-201ENST00000636230 99 ntBASIC1.47□□□□□ -2.17
RAB3GAP1Q15042 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
RAB3GAP1Q15042 RNU6-291P-201ENST00000384720 107 ntBASIC1.46□□□□□ -2.18
RAB3GAP1Q15042 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.46□□□□□ -2.18
RAB3GAP1Q15042 Y_RNA.660-201ENST00000516002 120 ntBASIC1.46□□□□□ -2.18
RAB3GAP1Q15042 MIR4804-201ENST00000581683 73 ntBASIC1.46□□□□□ -2.18
RAB3GAP1Q15042 MTRNR2L2-201ENST00000604882 87 ntBASIC1.46□□□□□ -2.18
RAB3GAP1Q15042 U7.4-201ENST00000614961 63 ntBASIC1.46□□□□□ -2.18
RAB3GAP1Q15042 Y_RNA.355-201ENST00000365462 98 ntBASIC1.45□□□□□ -2.18
RAB3GAP1Q15042 MIR938-201ENST00000401216 83 ntBASIC1.45□□□□□ -2.18
RAB3GAP1Q15042 SCARNA18B-201ENST00000458806 135 ntBASIC1.45□□□□□ -2.18
RAB3GAP1Q15042 RNU7-102P-201ENST00000458948 62 ntBASIC1.45□□□□□ -2.18
RAB3GAP1Q15042 AC138907.6-201ENST00000568401 126 ntBASIC1.45□□□□□ -2.18
RAB3GAP1Q15042 AC138869.1-201ENST00000568623 124 ntBASIC1.45□□□□□ -2.18
RAB3GAP1Q15042 MIR4696-201ENST00000581431 70 ntBASIC1.45□□□□□ -2.18
RAB3GAP1Q15042 AC008608.1-201ENST00000603910 127 ntBASIC1.45□□□□□ -2.18
RAB3GAP1Q15042 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
RAB3GAP1Q15042 RNU6-364P-201ENST00000384387 107 ntBASIC1.44□□□□□ -2.18
RAB3GAP1Q15042 Y_RNA.565-201ENST00000384719 101 ntBASIC1.44□□□□□ -2.18
RAB3GAP1Q15042 MIR599-201ENST00000385069 95 ntBASIC1.44□□□□□ -2.18
RAB3GAP1Q15042 SNORD77.2-201ENST00000391045 68 ntBASIC1.44□□□□□ -2.18
RAB3GAP1Q15042 RNU7-90P-201ENST00000459216 62 ntBASIC1.44□□□□□ -2.18
RAB3GAP1Q15042 RNU6-1265P-201ENST00000516342 103 ntBASIC1.44□□□□□ -2.18
RAB3GAP1Q15042 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.44□□□□□ -2.18
RAB3GAP1Q15042 AC027335.2-201ENST00000624030 375 ntBASIC1.44□□□□□ -2.18
RAB3GAP1Q15042 RNU6-535P-201ENST00000384722 107 ntBASIC1.43□□□□□ -2.18
RAB3GAP1Q15042 AC073261.1-201ENST00000429409 121 ntBASIC1.43□□□□□ -2.18
RAB3GAP1Q15042 RNU7-56P-201ENST00000458744 62 ntBASIC1.43□□□□□ -2.18
RAB3GAP1Q15042 RNU6-523P-201ENST00000516304 54 ntBASIC1.43□□□□□ -2.18
RAB3GAP1Q15042 MIR96-201ENST00000362288 78 ntBASIC1.42□□□□□ -2.18
RAB3GAP1Q15042 RNU6-664P-201ENST00000362381 107 ntBASIC1.42□□□□□ -2.18
RAB3GAP1Q15042 snoU13.17-201ENST00000458802 104 ntBASIC1.42□□□□□ -2.18
RAB3GAP1Q15042 RNU6-208P-201ENST00000362431 107 ntBASIC1.41□□□□□ -2.18
RAB3GAP1Q15042 SNORD114-27-201ENST00000363766 70 ntBASIC1.41□□□□□ -2.18
RAB3GAP1Q15042 Y_RNA.239-201ENST00000364444 113 ntBASIC1.41□□□□□ -2.18
RAB3GAP1Q15042 SNORD114-22-201ENST00000365423 72 ntBASIC1.41□□□□□ -2.18
RAB3GAP1Q15042 RNU6-1051P-201ENST00000365471 102 ntBASIC1.41□□□□□ -2.18
RAB3GAP1Q15042 SNORD101-201ENST00000384027 73 ntBASIC1.41□□□□□ -2.18
RAB3GAP1Q15042 MIR1285-1-201ENST00000408593 84 ntBASIC1.41□□□□□ -2.18
RAB3GAP1Q15042 RNU6-994P-201ENST00000410507 111 ntBASIC1.41□□□□□ -2.18
RAB3GAP1Q15042 MIR4452-201ENST00000583004 71 ntBASIC1.41□□□□□ -2.18
RAB3GAP1Q15042 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
RAB3GAP1Q15042 AC244505.6-201ENST00000452829 130 ntBASIC1.4□□□□□ -2.19
RAB3GAP1Q15042 AC139453.2-201ENST00000487255 133 ntBASIC1.4□□□□□ -2.19
RAB3GAP1Q15042 RNU6-977P-201ENST00000516411 103 ntBASIC1.4□□□□□ -2.19
RAB3GAP1Q15042 SNORA70.22-201ENST00000517160 124 ntBASIC1.4□□□□□ -2.19
RAB3GAP1Q15042 MIR3134-201ENST00000579433 74 ntBASIC1.4□□□□□ -2.19
RAB3GAP1Q15042 Y_RNA.264-201ENST00000364665 102 ntBASIC1.39□□□□□ -2.19
RAB3GAP1Q15042 Y_RNA.596-201ENST00000410462 109 ntBASIC1.39□□□□□ -2.19
RAB3GAP1Q15042 snoU13.18-201ENST00000459483 104 ntBASIC1.39□□□□□ -2.19
RAB3GAP1Q15042 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RAB3GAP1Q15042 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
RAB3GAP1Q15042 SNORD26-201ENST00000384147 75 ntBASIC1.38□□□□□ -2.19
RAB3GAP1Q15042 Y_RNA.545-201ENST00000384652 105 ntBASIC1.38□□□□□ -2.19
RAB3GAP1Q15042 MIR100-201ENST00000385259 80 ntBASIC1.38□□□□□ -2.19
RAB3GAP1Q15042 SNORD12-201ENST00000391002 90 ntBASIC1.38□□□□□ -2.19
RAB3GAP1Q15042 RNU1-119P-201ENST00000391122 165 ntBASIC1.38□□□□□ -2.19
RAB3GAP1Q15042 MIR1827-201ENST00000408549 66 ntBASIC1.38□□□□□ -2.19
RAB3GAP1Q15042 RNU6-380P-201ENST00000410207 107 ntBASIC1.38□□□□□ -2.19
RAB3GAP1Q15042 AC002429.1-201ENST00000437672 148 ntBASIC1.38□□□□□ -2.19
RAB3GAP1Q15042 MIR3140-201ENST00000583685 90 ntBASIC1.38□□□□□ -2.19
RAB3GAP1Q15042 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.38□□□□□ -2.19
RAB3GAP1Q15042 MIR1-1-201ENST00000362147 71 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms