Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 Y_RNA.374-201ENST00000365606 101 ntBASIC1.17□□□□□ -2.22
HERVK_113P62684 RNU6-402P-201ENST00000410678 103 ntBASIC1.17□□□□□ -2.22
HERVK_113P62684 Y_RNA.809-201ENST00000516058 95 ntBASIC1.17□□□□□ -2.22
HERVK_113P62684 AC138907.6-201ENST00000568401 126 ntBASIC1.17□□□□□ -2.22
HERVK_113P62684 AC138869.1-201ENST00000568623 124 ntBASIC1.17□□□□□ -2.22
HERVK_113P62684 AC211469.2-201ENST00000605461 205 ntBASIC1.17□□□□□ -2.22
HERVK_113P62684 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
HERVK_113P62684 RNU4-38P-201ENST00000364472 129 ntBASIC1.16□□□□□ -2.22
HERVK_113P62684 RNU6-1335P-201ENST00000365426 107 ntBASIC1.16□□□□□ -2.22
HERVK_113P62684 Y_RNA.593-201ENST00000410292 98 ntBASIC1.16□□□□□ -2.22
HERVK_113P62684 snoU13.11-201ENST00000459219 104 ntBASIC1.16□□□□□ -2.22
HERVK_113P62684 MIR4668-201ENST00000582284 70 ntBASIC1.16□□□□□ -2.22
HERVK_113P62684 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.16□□□□□ -2.22
HERVK_113P62684 IGLL4P-201ENST00000614590 133 ntBASIC1.16□□□□□ -2.22
HERVK_113P62684 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.16□□□□□ -2.22
HERVK_113P62684 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
HERVK_113P62684 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
HERVK_113P62684 MIR494-201ENST00000349529 81 ntBASIC1.15□□□□□ -2.23
HERVK_113P62684 Y_RNA.32-201ENST00000362589 110 ntBASIC1.14□□□□□ -2.23
HERVK_113P62684 Y_RNA.205-201ENST00000364128 113 ntBASIC1.14□□□□□ -2.23
HERVK_113P62684 RNA5SP117-201ENST00000365294 118 ntBASIC1.14□□□□□ -2.23
HERVK_113P62684 MIR450A2-201ENST00000385022 100 ntBASIC1.14□□□□□ -2.23
HERVK_113P62684 MIR532-201ENST00000385025 91 ntBASIC1.14□□□□□ -2.23
HERVK_113P62684 MIR599-201ENST00000385069 95 ntBASIC1.14□□□□□ -2.23
HERVK_113P62684 RNU6-466P-201ENST00000391224 103 ntBASIC1.14□□□□□ -2.23
HERVK_113P62684 Y_RNA.648-201ENST00000459455 110 ntBASIC1.14□□□□□ -2.23
HERVK_113P62684 RNA5SP436-201ENST00000516020 115 ntBASIC1.14□□□□□ -2.23
HERVK_113P62684 RNU6-267P-201ENST00000516714 103 ntBASIC1.14□□□□□ -2.23
HERVK_113P62684 SNORA31.14-201ENST00000516728 116 ntBASIC1.14□□□□□ -2.23
HERVK_113P62684 MIR3973-201ENST00000579824 107 ntBASIC1.14□□□□□ -2.23
HERVK_113P62684 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.14□□□□□ -2.23
HERVK_113P62684 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HERVK_113P62684 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.13□□□□□ -2.23
HERVK_113P62684 RNY1P1-201ENST00000364372 112 ntBASIC1.13□□□□□ -2.23
HERVK_113P62684 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.13□□□□□ -2.23
HERVK_113P62684 AL161932.1-201ENST00000437408 146 ntBASIC1.13□□□□□ -2.23
HERVK_113P62684 AC097635.1-201ENST00000450678 155 ntBASIC1.13□□□□□ -2.23
HERVK_113P62684 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
HERVK_113P62684 MIR5000-201ENST00000577717 103 ntBASIC1.13□□□□□ -2.23
HERVK_113P62684 AC025627.3-201ENST00000582078 182 ntBASIC1.13□□□□□ -2.23
HERVK_113P62684 RNU6-524P-201ENST00000384270 107 ntBASIC1.12□□□□□ -2.23
HERVK_113P62684 SNORA26.2-201ENST00000390922 122 ntBASIC1.12□□□□□ -2.23
HERVK_113P62684 RNU6-65P-201ENST00000516332 98 ntBASIC1.12□□□□□ -2.23
HERVK_113P62684 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.12□□□□□ -2.23
HERVK_113P62684 MIR4536-1-201ENST00000583537 88 ntBASIC1.12□□□□□ -2.23
HERVK_113P62684 MIR6857-201ENST00000613267 93 ntBASIC1.12□□□□□ -2.23
HERVK_113P62684 uc_338.16-201ENST00000621804 95 ntBASIC1.12□□□□□ -2.23
HERVK_113P62684 RNU6-1260P-201ENST00000362944 107 ntBASIC1.11□□□□□ -2.23
HERVK_113P62684 RNU6-957P-201ENST00000363652 99 ntBASIC1.11□□□□□ -2.23
HERVK_113P62684 Y_RNA.174-201ENST00000363781 105 ntBASIC1.11□□□□□ -2.23
HERVK_113P62684 Y_RNA.221-201ENST00000364248 96 ntBASIC1.11□□□□□ -2.23
HERVK_113P62684 Y_RNA.283-201ENST00000364798 112 ntBASIC1.11□□□□□ -2.23
HERVK_113P62684 MIR519A1-201ENST00000385257 85 ntBASIC1.11□□□□□ -2.23
HERVK_113P62684 RNU7-85P-201ENST00000458851 63 ntBASIC1.11□□□□□ -2.23
HERVK_113P62684 AC002350.1-201ENST00000490759 375 ntBASIC1.11□□□□□ -2.23
HERVK_113P62684 RNA5SP255-201ENST00000516370 107 ntBASIC1.11□□□□□ -2.23
HERVK_113P62684 CYP3A137P-201ENST00000562436 69 ntBASIC1.11□□□□□ -2.23
HERVK_113P62684 AC062037.1-201ENST00000605302 128 ntBASIC1.11□□□□□ -2.23
HERVK_113P62684 AC103810.9-201ENST00000606688 112 ntBASIC1.11□□□□□ -2.23
HERVK_113P62684 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.11□□□□□ -2.23
HERVK_113P62684 RNU4-32P-201ENST00000363404 141 ntBASIC1.1□□□□□ -2.23
HERVK_113P62684 RNU6-219P-201ENST00000364728 107 ntBASIC1.1□□□□□ -2.23
HERVK_113P62684 RNY4P29-201ENST00000410801 97 ntBASIC1.1□□□□□ -2.23
HERVK_113P62684 Y_RNA.620-201ENST00000411009 88 ntBASIC1.1□□□□□ -2.23
HERVK_113P62684 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.1□□□□□ -2.23
HERVK_113P62684 SNORD4B-201ENST00000459083 72 ntBASIC1.1□□□□□ -2.23
HERVK_113P62684 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.1□□□□□ -2.23
HERVK_113P62684 MIR644A-201ENST00000385262 94 ntBASIC1.09□□□□□ -2.23
HERVK_113P62684 SNORD99-201ENST00000408612 74 ntBASIC1.09□□□□□ -2.23
HERVK_113P62684 RNU6-469P-201ENST00000516253 101 ntBASIC1.09□□□□□ -2.23
HERVK_113P62684 RN7SKP12-201ENST00000516275 143 ntBASIC1.09□□□□□ -2.23
HERVK_113P62684 AC011195.1-201ENST00000578177 177 ntBASIC1.09□□□□□ -2.23
HERVK_113P62684 TRDV1-202ENST00000621643 102 ntBASIC1.09□□□□□ -2.23
HERVK_113P62684 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.09□□□□□ -2.23
HERVK_113P62684 Y_RNA.73-201ENST00000362910 113 ntBASIC1.08□□□□□ -2.24
HERVK_113P62684 MIR573-201ENST00000384964 99 ntBASIC1.08□□□□□ -2.24
HERVK_113P62684 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
HERVK_113P62684 MIR1302-4-201ENST00000408701 150 ntBASIC1.08□□□□□ -2.24
HERVK_113P62684 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.08□□□□□ -2.24
HERVK_113P62684 SNORD115-24-201ENST00000363528 82 ntBASIC1.07□□□□□ -2.24
HERVK_113P62684 RNU6-675P-201ENST00000384236 104 ntBASIC1.07□□□□□ -2.24
HERVK_113P62684 Y_RNA.611-201ENST00000410682 108 ntBASIC1.07□□□□□ -2.24
HERVK_113P62684 AL606490.4-201ENST00000423117 127 ntBASIC1.07□□□□□ -2.24
HERVK_113P62684 AC244505.6-201ENST00000452829 130 ntBASIC1.07□□□□□ -2.24
HERVK_113P62684 SNORA72.7-201ENST00000516349 94 ntBASIC1.07□□□□□ -2.24
HERVK_113P62684 MIR3612-201ENST00000579753 87 ntBASIC1.07□□□□□ -2.24
HERVK_113P62684 RNU6-633P-201ENST00000362612 103 ntBASIC1.06□□□□□ -2.24
HERVK_113P62684 Y_RNA.388-201ENST00000383919 113 ntBASIC1.06□□□□□ -2.24
HERVK_113P62684 RNU6-820P-201ENST00000384273 107 ntBASIC1.06□□□□□ -2.24
HERVK_113P62684 MIR4698-201ENST00000577795 80 ntBASIC1.06□□□□□ -2.24
HERVK_113P62684 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.06□□□□□ -2.24
HERVK_113P62684 RNU6-509P-201ENST00000363519 107 ntBASIC1.05□□□□□ -2.24
HERVK_113P62684 SNORD115-27-201ENST00000364430 82 ntBASIC1.05□□□□□ -2.24
HERVK_113P62684 MIR519C-201ENST00000385053 87 ntBASIC1.05□□□□□ -2.24
HERVK_113P62684 AC022137.1-201ENST00000483735 151 ntBASIC1.05□□□□□ -2.24
HERVK_113P62684 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.05□□□□□ -2.24
HERVK_113P62684 RNU6-497P-201ENST00000365316 104 ntBASIC1.04□□□□□ -2.24
HERVK_113P62684 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HERVK_113P62684 RNU6-75P-201ENST00000515944 104 ntBASIC1.04□□□□□ -2.24
HERVK_113P62684 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms