Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RNA5SP461-201ENST00000516451 104 ntBASIC-2.42□□□□□ -2.8
LSM3P62310 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.42□□□□□ -2.8
LSM3P62310 MIR4744-201ENST00000581563 82 ntBASIC-2.42□□□□□ -2.8
LSM3P62310 AC092794.1-201ENST00000612734 582 ntBASIC-2.42□□□□□ -2.8
LSM3P62310 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.42□□□□□ -2.8
LSM3P62310 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.43□□□□□ -2.8
LSM3P62310 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.43□□□□□ -2.8
LSM3P62310 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.43□□□□□ -2.8
LSM3P62310 RNU6-1082P-201ENST00000364574 107 ntBASIC-2.43□□□□□ -2.8
LSM3P62310 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.43□□□□□ -2.8
LSM3P62310 FGF7P4-201ENST00000509595 295 ntBASIC-2.43□□□□□ -2.8
LSM3P62310 MTND3P22-201ENST00000510932 243 ntBASIC-2.43□□□□□ -2.8
LSM3P62310 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-2.43□□□□□ -2.8
LSM3P62310 MIR3140-201ENST00000583685 90 ntBASIC-2.43□□□□□ -2.8
LSM3P62310 SNORA33.1-201ENST00000364957 130 ntBASIC-2.44□□□□□ -2.8
LSM3P62310 RNU6-643P-201ENST00000384018 107 ntBASIC-2.44□□□□□ -2.8
LSM3P62310 MT-TI-201ENST00000387365 69 ntBASIC-2.44□□□□□ -2.8
LSM3P62310 MTND1P29-201ENST00000448112 647 ntBASIC-2.44□□□□□ -2.8
LSM3P62310 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.44□□□□□ -2.8
LSM3P62310 AC113139.1-201ENST00000605049 239 ntBASIC-2.44□□□□□ -2.8
LSM3P62310 SNORD115-19-201ENST00000363098 82 ntBASIC-2.45□□□□□ -2.8
LSM3P62310 SNORD115-18-201ENST00000363293 82 ntBASIC-2.45□□□□□ -2.8
LSM3P62310 SNORD115-17-201ENST00000364612 82 ntBASIC-2.45□□□□□ -2.8
LSM3P62310 Y_RNA.559-201ENST00000384686 107 ntBASIC-2.45□□□□□ -2.8
LSM3P62310 RNU6-578P-201ENST00000390980 103 ntBASIC-2.45□□□□□ -2.8
LSM3P62310 AP002795.1-201ENST00000534879 84 ntBASIC-2.45□□□□□ -2.8
LSM3P62310 AC080013.6-201ENST00000606185 215 ntBASIC-2.45□□□□□ -2.8
LSM3P62310 AL512310.12-203ENST00000640543 90 ntBASIC-2.45□□□□□ -2.8
LSM3P62310 RNU6-80P-201ENST00000384195 107 ntBASIC-2.46□□□□□ -2.8
LSM3P62310 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.46□□□□□ -2.8
LSM3P62310 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.46□□□□□ -2.8
LSM3P62310 MIR409-201ENST00000362237 79 ntBASIC-2.47□□□□□ -2.8
LSM3P62310 SNORD38.1-201ENST00000363863 68 ntBASIC-2.47□□□□□ -2.8
LSM3P62310 SNORD57-201ENST00000448188 72 ntBASIC-2.47□□□□□ -2.8
LSM3P62310 RNA5SP147-201ENST00000516493 109 ntBASIC-2.47□□□□□ -2.8
LSM3P62310 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.47□□□□□ -2.8
LSM3P62310 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.48□□□□□ -2.81
LSM3P62310 RNU6-806P-201ENST00000365147 105 ntBASIC-2.48□□□□□ -2.81
LSM3P62310 RNA5SP86-201ENST00000390869 98 ntBASIC-2.48□□□□□ -2.81
LSM3P62310 SNORD75.2-201ENST00000408784 58 ntBASIC-2.48□□□□□ -2.81
LSM3P62310 RPL35AP4-201ENST00000412007 102 ntBASIC-2.48□□□□□ -2.81
LSM3P62310 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.48□□□□□ -2.81
LSM3P62310 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.49□□□□□ -2.81
LSM3P62310 Y_RNA.166-201ENST00000363730 102 ntBASIC-2.49□□□□□ -2.81
LSM3P62310 RNU6-450P-201ENST00000364654 107 ntBASIC-2.49□□□□□ -2.81
LSM3P62310 MIR1302-11-201ENST00000408051 138 ntBASIC-2.49□□□□□ -2.81
LSM3P62310 MIR1302-9-201ENST00000408365 138 ntBASIC-2.49□□□□□ -2.81
LSM3P62310 MIR1302-10-201ENST00000408734 138 ntBASIC-2.49□□□□□ -2.81
LSM3P62310 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.49□□□□□ -2.81
LSM3P62310 MTATP6P21-201ENST00000440681 189 ntBASIC-2.49□□□□□ -2.81
LSM3P62310 Y_RNA.711-201ENST00000516993 102 ntBASIC-2.49□□□□□ -2.81
LSM3P62310 MIR1302-2-201ENST00000607096 138 ntBASIC-2.49□□□□□ -2.81
LSM3P62310 AC002553.4-201ENST00000616896 331 ntBASIC-2.49□□□□□ -2.81
LSM3P62310 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.5□□□□□ -2.81
LSM3P62310 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.5□□□□□ -2.81
LSM3P62310 MIR548A1-201ENST00000385041 97 ntBASIC-2.5□□□□□ -2.81
LSM3P62310 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.5□□□□□ -2.81
LSM3P62310 MTND5P22-201ENST00000458380 195 ntBASIC-2.5□□□□□ -2.81
LSM3P62310 snoU13.17-201ENST00000458802 104 ntBASIC-2.5□□□□□ -2.81
LSM3P62310 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.5□□□□□ -2.81
LSM3P62310 CYP3A54P-201ENST00000566950 75 ntBASIC-2.5□□□□□ -2.81
LSM3P62310 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.5□□□□□ -2.81
LSM3P62310 SNORA63.2-201ENST00000362603 126 ntBASIC-2.51□□□□□ -2.81
LSM3P62310 MIR548H1-201ENST00000408610 102 ntBASIC-2.51□□□□□ -2.81
LSM3P62310 RNU6-718P-201ENST00000516166 105 ntBASIC-2.51□□□□□ -2.81
LSM3P62310 RNU6-65P-201ENST00000516332 98 ntBASIC-2.51□□□□□ -2.81
LSM3P62310 RNU6-720P-201ENST00000516363 108 ntBASIC-2.51□□□□□ -2.81
LSM3P62310 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 RNU6-132P-201ENST00000383863 107 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 SNORA24B-201ENST00000384176 131 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 ELOCP20-201ENST00000422460 345 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 AL137067.1-201ENST00000615933 120 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 AC021753.1-201ENST00000635724 168 ntBASIC-2.52□□□□□ -2.81
LSM3P62310 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.53□□□□□ -2.81
LSM3P62310 SNORA63.7-201ENST00000365579 123 ntBASIC-2.53□□□□□ -2.81
LSM3P62310 RNU6-976P-201ENST00000516086 111 ntBASIC-2.53□□□□□ -2.81
LSM3P62310 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.53□□□□□ -2.81
LSM3P62310 MIR4536-1-201ENST00000583537 88 ntBASIC-2.53□□□□□ -2.81
LSM3P62310 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.54□□□□□ -2.82
LSM3P62310 RNU6-818P-201ENST00000364837 108 ntBASIC-2.54□□□□□ -2.82
LSM3P62310 SNORD116-1-201ENST00000384335 95 ntBASIC-2.54□□□□□ -2.82
LSM3P62310 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.54□□□□□ -2.82
LSM3P62310 RNU6-768P-201ENST00000384683 107 ntBASIC-2.54□□□□□ -2.82
LSM3P62310 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.54□□□□□ -2.82
LSM3P62310 AC090616.4-201ENST00000448026 115 ntBASIC-2.54□□□□□ -2.82
LSM3P62310 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.54□□□□□ -2.82
LSM3P62310 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-2.54□□□□□ -2.82
LSM3P62310 RNU6-732P-201ENST00000516033 103 ntBASIC-2.54□□□□□ -2.82
LSM3P62310 AC025521.1-201ENST00000621624 286 ntBASIC-2.54□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 310.2 ms