Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
CLDN20P56880 RNU6-524P-201ENST00000384270 107 ntBASIC0.32□□□□□ -2.36
CLDN20P56880 SNORD41.1-201ENST00000391000 69 ntBASIC0.32□□□□□ -2.36
CLDN20P56880 RNU6-1154P-201ENST00000391001 104 ntBASIC0.32□□□□□ -2.36
CLDN20P56880 AC069271.1-201ENST00000445577 156 ntBASIC0.32□□□□□ -2.36
CLDN20P56880 RN7SL793P-201ENST00000583259 296 ntBASIC0.32□□□□□ -2.36
CLDN20P56880 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
CLDN20P56880 Y_RNA.36-201ENST00000362602 112 ntBASIC0.31□□□□□ -2.36
CLDN20P56880 SNORD114-23-201ENST00000363536 72 ntBASIC0.31□□□□□ -2.36
CLDN20P56880 VTRNA1-3-201ENST00000365645 89 ntBASIC0.31□□□□□ -2.36
CLDN20P56880 SNORA50A-201ENST00000384225 134 ntBASIC0.31□□□□□ -2.36
CLDN20P56880 RNU6-243P-201ENST00000391140 107 ntBASIC0.31□□□□□ -2.36
CLDN20P56880 AC141557.1-201ENST00000540982 400 ntBASIC0.31□□□□□ -2.36
CLDN20P56880 SNORD36A-201ENST00000362874 73 ntBASIC0.3□□□□□ -2.36
CLDN20P56880 RNU6-1125P-201ENST00000363601 107 ntBASIC0.3□□□□□ -2.36
CLDN20P56880 RNU6-1107P-201ENST00000364817 104 ntBASIC0.3□□□□□ -2.36
CLDN20P56880 RNU6-1014P-201ENST00000383940 103 ntBASIC0.3□□□□□ -2.36
CLDN20P56880 RNU6-480P-201ENST00000384332 107 ntBASIC0.3□□□□□ -2.36
CLDN20P56880 RNY1P4-201ENST00000384595 115 ntBASIC0.3□□□□□ -2.36
CLDN20P56880 RNU2-51P-201ENST00000410708 197 ntBASIC0.3□□□□□ -2.36
CLDN20P56880 RNU4-61P-201ENST00000411243 107 ntBASIC0.3□□□□□ -2.36
CLDN20P56880 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.3□□□□□ -2.36
CLDN20P56880 RNU6-848P-201ENST00000515948 107 ntBASIC0.3□□□□□ -2.36
CLDN20P56880 Y_RNA.659-201ENST00000515994 113 ntBASIC0.3□□□□□ -2.36
CLDN20P56880 RNU6-617P-201ENST00000516147 107 ntBASIC0.3□□□□□ -2.36
CLDN20P56880 RNU6-473P-201ENST00000516164 107 ntBASIC0.3□□□□□ -2.36
CLDN20P56880 RNU6-1265P-201ENST00000516342 103 ntBASIC0.3□□□□□ -2.36
CLDN20P56880 RNU6-1049P-201ENST00000516414 107 ntBASIC0.3□□□□□ -2.36
CLDN20P56880 AL162376.1-201ENST00000624117 175 ntBASIC0.3□□□□□ -2.36
CLDN20P56880 RNU6-1163P-201ENST00000364516 107 ntBASIC0.29□□□□□ -2.36
CLDN20P56880 RNU6-1056P-201ENST00000383996 107 ntBASIC0.29□□□□□ -2.36
CLDN20P56880 RNU7-13P-201ENST00000516413 62 ntBASIC0.29□□□□□ -2.36
CLDN20P56880 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
CLDN20P56880 Y_RNA.10-201ENST00000362371 110 ntBASIC0.28□□□□□ -2.36
CLDN20P56880 RNA5SP62-201ENST00000363457 110 ntBASIC0.28□□□□□ -2.36
CLDN20P56880 Y_RNA.163-201ENST00000363702 113 ntBASIC0.28□□□□□ -2.36
CLDN20P56880 RNU4-36P-201ENST00000364294 144 ntBASIC0.28□□□□□ -2.36
CLDN20P56880 SNORD45B-201ENST00000364617 72 ntBASIC0.28□□□□□ -2.36
CLDN20P56880 Y_RNA.540-201ENST00000384638 111 ntBASIC0.28□□□□□ -2.36
CLDN20P56880 AC108740.1-201ENST00000498629 225 ntBASIC0.28□□□□□ -2.36
CLDN20P56880 RNU6-406P-201ENST00000516470 107 ntBASIC0.28□□□□□ -2.36
CLDN20P56880 MIR4439-201ENST00000583746 80 ntBASIC0.28□□□□□ -2.36
CLDN20P56880 AL606753.1-201ENST00000427435 87 ntBASIC0.27□□□□□ -2.37
CLDN20P56880 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.27□□□□□ -2.37
CLDN20P56880 MIR3613-201ENST00000579844 87 ntBASIC0.27□□□□□ -2.37
CLDN20P56880 MIR3920-201ENST00000581751 86 ntBASIC0.27□□□□□ -2.37
CLDN20P56880 MIR6755-201ENST00000619993 66 ntBASIC0.27□□□□□ -2.37
CLDN20P56880 AC010487.4-201ENST00000637027 61 ntBASIC0.27□□□□□ -2.37
CLDN20P56880 RNU6-1244P-201ENST00000363614 108 ntBASIC0.26□□□□□ -2.37
CLDN20P56880 SNORD115-44-201ENST00000365391 82 ntBASIC0.26□□□□□ -2.37
CLDN20P56880 Y_RNA.423-201ENST00000384057 113 ntBASIC0.26□□□□□ -2.37
CLDN20P56880 AC073261.1-201ENST00000429409 121 ntBASIC0.26□□□□□ -2.37
CLDN20P56880 AC109327.2-201ENST00000448339 378 ntBASIC0.26□□□□□ -2.37
CLDN20P56880 RNU7-74P-201ENST00000459104 62 ntBASIC0.26□□□□□ -2.37
CLDN20P56880 RNA5SP480-201ENST00000516840 109 ntBASIC0.26□□□□□ -2.37
CLDN20P56880 MIR6129-201ENST00000616087 109 ntBASIC0.26□□□□□ -2.37
CLDN20P56880 AC073869.9-201ENST00000641610 120 ntBASIC0.26□□□□□ -2.37
CLDN20P56880 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
CLDN20P56880 SNORA2A-201ENST00000383885 135 ntBASIC0.25□□□□□ -2.37
CLDN20P56880 MIR193B-201ENST00000384907 83 ntBASIC0.25□□□□□ -2.37
CLDN20P56880 MIR181B2-201ENST00000385004 89 ntBASIC0.25□□□□□ -2.37
CLDN20P56880 RNU6-269P-201ENST00000391077 97 ntBASIC0.25□□□□□ -2.37
CLDN20P56880 Y_RNA.601-201ENST00000410500 113 ntBASIC0.25□□□□□ -2.37
CLDN20P56880 MIR4752-201ENST00000579672 72 ntBASIC0.25□□□□□ -2.37
CLDN20P56880 RNU6-86P-201ENST00000606534 107 ntBASIC0.25□□□□□ -2.37
CLDN20P56880 TRDV1-202ENST00000621643 102 ntBASIC0.25□□□□□ -2.37
CLDN20P56880 Y_RNA.78-201ENST00000362970 110 ntBASIC0.24□□□□□ -2.37
CLDN20P56880 Y_RNA.95-201ENST00000363079 95 ntBASIC0.24□□□□□ -2.37
CLDN20P56880 SNORD114-26-201ENST00000363543 72 ntBASIC0.24□□□□□ -2.37
CLDN20P56880 Y_RNA.273-201ENST00000364703 102 ntBASIC0.24□□□□□ -2.37
CLDN20P56880 AC069113.3-201ENST00000521019 150 ntBASIC0.24□□□□□ -2.37
CLDN20P56880 MIR5706-201ENST00000579841 80 ntBASIC0.24□□□□□ -2.37
CLDN20P56880 SNORA9.1-201ENST00000362412 131 ntBASIC0.23□□□□□ -2.37
CLDN20P56880 RNU6-509P-201ENST00000363519 107 ntBASIC0.23□□□□□ -2.37
CLDN20P56880 RNU6-815P-201ENST00000384080 113 ntBASIC0.23□□□□□ -2.37
CLDN20P56880 Y_RNA.466-201ENST00000384294 113 ntBASIC0.23□□□□□ -2.37
CLDN20P56880 MIR1302-5-201ENST00000408164 150 ntBASIC0.23□□□□□ -2.37
CLDN20P56880 RNU6-589P-201ENST00000516485 107 ntBASIC0.23□□□□□ -2.37
CLDN20P56880 RNU1-29P-201ENST00000606574 126 ntBASIC0.23□□□□□ -2.37
CLDN20P56880 RNU6-1081P-201ENST00000384537 107 ntBASIC0.22□□□□□ -2.37
CLDN20P56880 MIR760-201ENST00000390220 80 ntBASIC0.22□□□□□ -2.37
CLDN20P56880 RNU6-466P-201ENST00000391224 103 ntBASIC0.22□□□□□ -2.37
CLDN20P56880 RNU6-904P-201ENST00000516206 101 ntBASIC0.22□□□□□ -2.37
CLDN20P56880 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
CLDN20P56880 MIR4315-1-201ENST00000636800 73 ntBASIC0.22□□□□□ -2.37
CLDN20P56880 MIR4315-2-201ENST00000640925 73 ntBASIC0.22□□□□□ -2.37
CLDN20P56880 RNU6-957P-201ENST00000363652 99 ntBASIC0.21□□□□□ -2.38
CLDN20P56880 MIR1273G-201ENST00000577677 100 ntBASIC0.21□□□□□ -2.38
CLDN20P56880 U7.6-201ENST00000610841 64 ntBASIC0.21□□□□□ -2.38
CLDN20P56880 RNA5SP128-201ENST00000365305 116 ntBASIC0.2□□□□□ -2.38
CLDN20P56880 RNU6-813P-201ENST00000384691 107 ntBASIC0.2□□□□□ -2.38
CLDN20P56880 SNORA19-201ENST00000384737 128 ntBASIC0.2□□□□□ -2.38
CLDN20P56880 Y_RNA.596-201ENST00000410462 109 ntBASIC0.2□□□□□ -2.38
CLDN20P56880 AL161932.1-201ENST00000437408 146 ntBASIC0.2□□□□□ -2.38
CLDN20P56880 Y_RNA.648-201ENST00000459455 110 ntBASIC0.2□□□□□ -2.38
CLDN20P56880 SNORA70.25-201ENST00000612741 95 ntBASIC0.2□□□□□ -2.38
CLDN20P56880 AC025521.1-201ENST00000621624 286 ntBASIC0.2□□□□□ -2.38
CLDN20P56880 U6.100-201ENST00000636230 99 ntBASIC0.2□□□□□ -2.38
CLDN20P56880 MIR617-201ENST00000385030 97 ntBASIC0.19□□□□□ -2.38
CLDN20P56880 Y_RNA.629-201ENST00000411368 105 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 199.3 ms