Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RNU6-219P-201ENST00000364728 107 ntBASIC1.08□□□□□ -2.24
GFRA1P56159 RNU4-45P-201ENST00000365469 141 ntBASIC1.08□□□□□ -2.24
GFRA1P56159 RNU6-675P-201ENST00000384236 104 ntBASIC1.08□□□□□ -2.24
GFRA1P56159 MIR644A-201ENST00000385262 94 ntBASIC1.08□□□□□ -2.24
GFRA1P56159 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.08□□□□□ -2.24
GFRA1P56159 RNA5SP247-201ENST00000411181 105 ntBASIC1.07□□□□□ -2.24
GFRA1P56159 AC244098.3-201ENST00000424803 96 ntBASIC1.07□□□□□ -2.24
GFRA1P56159 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.07□□□□□ -2.24
GFRA1P56159 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.07□□□□□ -2.24
GFRA1P56159 AL353765.1-201ENST00000605514 183 ntBASIC1.07□□□□□ -2.24
GFRA1P56159 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.07□□□□□ -2.24
GFRA1P56159 MIR8070-201ENST00000616510 88 ntBASIC1.07□□□□□ -2.24
GFRA1P56159 MIR494-201ENST00000349529 81 ntBASIC1.06□□□□□ -2.24
GFRA1P56159 RNU6-633P-201ENST00000362612 103 ntBASIC1.06□□□□□ -2.24
GFRA1P56159 RNU4-32P-201ENST00000363404 141 ntBASIC1.06□□□□□ -2.24
GFRA1P56159 RNU6-820P-201ENST00000384273 107 ntBASIC1.06□□□□□ -2.24
GFRA1P56159 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
GFRA1P56159 MIR4639-201ENST00000584938 69 ntBASIC1.06□□□□□ -2.24
GFRA1P56159 SNORA25.9-201ENST00000365087 128 ntBASIC1.05□□□□□ -2.24
GFRA1P56159 MIR548U-201ENST00000390728 81 ntBASIC1.05□□□□□ -2.24
GFRA1P56159 SNORA26.2-201ENST00000390922 122 ntBASIC1.05□□□□□ -2.24
GFRA1P56159 AL606490.4-201ENST00000423117 127 ntBASIC1.05□□□□□ -2.24
GFRA1P56159 RNU6-75P-201ENST00000515944 104 ntBASIC1.05□□□□□ -2.24
GFRA1P56159 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.05□□□□□ -2.24
GFRA1P56159 RNU6-1265P-201ENST00000516342 103 ntBASIC1.05□□□□□ -2.24
GFRA1P56159 RNU6-267P-201ENST00000516714 103 ntBASIC1.05□□□□□ -2.24
GFRA1P56159 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.05□□□□□ -2.24
GFRA1P56159 MIR3678-201ENST00000578455 94 ntBASIC1.05□□□□□ -2.24
GFRA1P56159 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
GFRA1P56159 RNU6-509P-201ENST00000363519 107 ntBASIC1.04□□□□□ -2.24
GFRA1P56159 RNU6-811P-201ENST00000384069 107 ntBASIC1.04□□□□□ -2.24
GFRA1P56159 MIR519C-201ENST00000385053 87 ntBASIC1.04□□□□□ -2.24
GFRA1P56159 MIR1236-201ENST00000408340 102 ntBASIC1.04□□□□□ -2.24
GFRA1P56159 RN7SKP12-201ENST00000516275 143 ntBASIC1.04□□□□□ -2.24
GFRA1P56159 MIR18A-201ENST00000362310 71 ntBASIC1.03□□□□□ -2.24
GFRA1P56159 Y_RNA.191-201ENST00000363972 113 ntBASIC1.03□□□□□ -2.24
GFRA1P56159 Y_RNA.596-201ENST00000410462 109 ntBASIC1.03□□□□□ -2.24
GFRA1P56159 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.03□□□□□ -2.24
GFRA1P56159 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
GFRA1P56159 SNORA72.7-201ENST00000516349 94 ntBASIC1.03□□□□□ -2.24
GFRA1P56159 AC062037.1-201ENST00000605302 128 ntBASIC1.03□□□□□ -2.24
GFRA1P56159 RNA5SP403-201ENST00000363598 108 ntBASIC1.02□□□□□ -2.25
GFRA1P56159 SNORD18A-201ENST00000363753 72 ntBASIC1.02□□□□□ -2.25
GFRA1P56159 SNORD115-37-201ENST00000363768 82 ntBASIC1.02□□□□□ -2.25
GFRA1P56159 Y_RNA.226-201ENST00000364337 114 ntBASIC1.02□□□□□ -2.25
GFRA1P56159 SNORD101-201ENST00000384027 73 ntBASIC1.02□□□□□ -2.25
GFRA1P56159 SNORD28-201ENST00000384706 75 ntBASIC1.02□□□□□ -2.25
GFRA1P56159 RNY4P29-201ENST00000410801 97 ntBASIC1.02□□□□□ -2.25
GFRA1P56159 RNA5SP222-201ENST00000411039 105 ntBASIC1.02□□□□□ -2.25
GFRA1P56159 RNU7-104P-201ENST00000459398 79 ntBASIC1.02□□□□□ -2.25
GFRA1P56159 RNU7-13P-201ENST00000516413 62 ntBASIC1.02□□□□□ -2.25
GFRA1P56159 U6.100-201ENST00000636230 99 ntBASIC1.02□□□□□ -2.25
GFRA1P56159 SNORD115-44-201ENST00000365391 82 ntBASIC1.01□□□□□ -2.25
GFRA1P56159 MIR499A-201ENST00000384903 122 ntBASIC1.01□□□□□ -2.25
GFRA1P56159 MIR1276-201ENST00000408707 83 ntBASIC1.01□□□□□ -2.25
GFRA1P56159 Y_RNA.611-201ENST00000410682 108 ntBASIC1.01□□□□□ -2.25
GFRA1P56159 RNU7-161P-201ENST00000517289 62 ntBASIC1.01□□□□□ -2.25
GFRA1P56159 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.01□□□□□ -2.25
GFRA1P56159 AC104996.3-201ENST00000590718 94 ntBASIC1.01□□□□□ -2.25
GFRA1P56159 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.01□□□□□ -2.25
GFRA1P56159 AC244669.1-204ENST00000621564 178 ntBASIC1.01□□□□□ -2.25
GFRA1P56159 SNORD115-27-201ENST00000364430 82 ntBASIC1□□□□□ -2.25
GFRA1P56159 Y_RNA.239-201ENST00000364444 113 ntBASIC1□□□□□ -2.25
GFRA1P56159 Y_RNA.508-201ENST00000384502 114 ntBASIC1□□□□□ -2.25
GFRA1P56159 MIR608-201ENST00000384820 100 ntBASIC1□□□□□ -2.25
GFRA1P56159 MIR1287-201ENST00000408492 90 ntBASIC1□□□□□ -2.25
GFRA1P56159 RNA5SP102-201ENST00000516865 106 ntBASIC1□□□□□ -2.25
GFRA1P56159 AC067863.3-201ENST00000624172 122 ntBASIC1□□□□□ -2.25
GFRA1P56159 MIR548BB-201ENST00000626714 66 ntBASIC1□□□□□ -2.25
GFRA1P56159 MIRLET7F1-201ENST00000362202 87 ntBASIC0.99□□□□□ -2.25
GFRA1P56159 RNU6-664P-201ENST00000362381 107 ntBASIC0.99□□□□□ -2.25
GFRA1P56159 Y_RNA.73-201ENST00000362910 113 ntBASIC0.99□□□□□ -2.25
GFRA1P56159 RNU6-242P-201ENST00000384359 107 ntBASIC0.99□□□□□ -2.25
GFRA1P56159 MIR518E-201ENST00000385252 88 ntBASIC0.99□□□□□ -2.25
GFRA1P56159 AC022137.1-201ENST00000483735 151 ntBASIC0.99□□□□□ -2.25
GFRA1P56159 MIR3064-201ENST00000581130 66 ntBASIC0.99□□□□□ -2.25
GFRA1P56159 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
GFRA1P56159 MIR96-201ENST00000362288 78 ntBASIC0.98□□□□□ -2.25
GFRA1P56159 RNU6-132P-201ENST00000383863 107 ntBASIC0.98□□□□□ -2.25
GFRA1P56159 MIR548L-201ENST00000408303 86 ntBASIC0.98□□□□□ -2.25
GFRA1P56159 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
GFRA1P56159 RNA5SP47-201ENST00000517230 109 ntBASIC0.98□□□□□ -2.25
GFRA1P56159 MIR4696-201ENST00000581431 70 ntBASIC0.98□□□□□ -2.25
GFRA1P56159 MTRNR2L2-201ENST00000604882 87 ntBASIC0.98□□□□□ -2.25
GFRA1P56159 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
GFRA1P56159 RNU6-497P-201ENST00000365316 104 ntBASIC0.97□□□□□ -2.25
GFRA1P56159 Y_RNA.426-201ENST00000384068 113 ntBASIC0.97□□□□□ -2.25
GFRA1P56159 Y_RNA.491-201ENST00000384417 107 ntBASIC0.97□□□□□ -2.25
GFRA1P56159 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.97□□□□□ -2.25
GFRA1P56159 SCARNA16.5-201ENST00000517114 183 ntBASIC0.97□□□□□ -2.25
GFRA1P56159 MIR6504-201ENST00000613520 61 ntBASIC0.97□□□□□ -2.25
GFRA1P56159 SNORA36.2-201ENST00000384004 127 ntBASIC0.96□□□□□ -2.26
GFRA1P56159 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
GFRA1P56159 AC093729.1-201ENST00000513074 128 ntBASIC0.96□□□□□ -2.26
GFRA1P56159 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
GFRA1P56159 RNU6-1057P-201ENST00000517162 102 ntBASIC0.96□□□□□ -2.26
GFRA1P56159 MIR5588-201ENST00000581890 63 ntBASIC0.96□□□□□ -2.26
GFRA1P56159 RNA5SP292-201ENST00000390974 118 ntBASIC0.95□□□□□ -2.26
GFRA1P56159 RNU6-935P-201ENST00000410371 100 ntBASIC0.95□□□□□ -2.26
GFRA1P56159 MIR4796-201ENST00000580742 81 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 246.6 ms