Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU6-1099P-201ENST00000363533 107 ntBASIC0.31□□□□□ -2.36
CDH11P55287 Y_RNA.323-201ENST00000365157 109 ntBASIC0.31□□□□□ -2.36
CDH11P55287 RNU6-1117P-201ENST00000384525 104 ntBASIC0.31□□□□□ -2.36
CDH11P55287 SPINT5P-201ENST00000448174 155 ntBASIC0.31□□□□□ -2.36
CDH11P55287 AL162376.1-201ENST00000624117 175 ntBASIC0.31□□□□□ -2.36
CDH11P55287 RNY3P2-201ENST00000362918 102 ntBASIC0.3□□□□□ -2.36
CDH11P55287 RNU6-832P-201ENST00000363319 107 ntBASIC0.3□□□□□ -2.36
CDH11P55287 RNA5SP325-201ENST00000363756 130 ntBASIC0.3□□□□□ -2.36
CDH11P55287 RNU6-1163P-201ENST00000364516 107 ntBASIC0.3□□□□□ -2.36
CDH11P55287 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
CDH11P55287 RNU6-716P-201ENST00000365621 103 ntBASIC0.3□□□□□ -2.36
CDH11P55287 SNORD116-21-201ENST00000384507 92 ntBASIC0.3□□□□□ -2.36
CDH11P55287 RNU6-880P-201ENST00000384526 107 ntBASIC0.3□□□□□ -2.36
CDH11P55287 RNU7-104P-201ENST00000459398 79 ntBASIC0.3□□□□□ -2.36
CDH11P55287 RNU6-1144P-201ENST00000384247 104 ntBASIC0.29□□□□□ -2.36
CDH11P55287 RNU6-848P-201ENST00000515948 107 ntBASIC0.29□□□□□ -2.36
CDH11P55287 RNU6-617P-201ENST00000516147 107 ntBASIC0.29□□□□□ -2.36
CDH11P55287 RNU6-473P-201ENST00000516164 107 ntBASIC0.29□□□□□ -2.36
CDH11P55287 RNU6-479P-201ENST00000516348 105 ntBASIC0.29□□□□□ -2.36
CDH11P55287 RNU6-1049P-201ENST00000516414 107 ntBASIC0.29□□□□□ -2.36
CDH11P55287 MIR3920-201ENST00000581751 86 ntBASIC0.29□□□□□ -2.36
CDH11P55287 AC067863.3-201ENST00000624172 122 ntBASIC0.29□□□□□ -2.36
CDH11P55287 MIR924-201ENST00000638017 53 ntBASIC0.29□□□□□ -2.36
CDH11P55287 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CDH11P55287 RNU6-524P-201ENST00000384270 107 ntBASIC0.28□□□□□ -2.36
CDH11P55287 RNU6-1254P-201ENST00000391266 104 ntBASIC0.28□□□□□ -2.36
CDH11P55287 RNU6-62P-201ENST00000516526 102 ntBASIC0.28□□□□□ -2.36
CDH11P55287 Y_RNA.57-201ENST00000362806 113 ntBASIC0.27□□□□□ -2.37
CDH11P55287 RNU6-476P-201ENST00000384726 107 ntBASIC0.27□□□□□ -2.37
CDH11P55287 MIR8087-201ENST00000612745 78 ntBASIC0.27□□□□□ -2.37
CDH11P55287 MIR330-201ENST00000362196 94 ntBASIC0.26□□□□□ -2.37
CDH11P55287 RNU6-834P-201ENST00000362367 110 ntBASIC0.26□□□□□ -2.37
CDH11P55287 RNU6-1107P-201ENST00000364817 104 ntBASIC0.26□□□□□ -2.37
CDH11P55287 RNU6-1014P-201ENST00000383940 103 ntBASIC0.26□□□□□ -2.37
CDH11P55287 RNU6-269P-201ENST00000391077 97 ntBASIC0.26□□□□□ -2.37
CDH11P55287 RNU6-1064P-201ENST00000410626 104 ntBASIC0.26□□□□□ -2.37
CDH11P55287 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.26□□□□□ -2.37
CDH11P55287 RNU6-406P-201ENST00000516470 107 ntBASIC0.26□□□□□ -2.37
CDH11P55287 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
CDH11P55287 MIR4752-201ENST00000579672 72 ntBASIC0.26□□□□□ -2.37
CDH11P55287 AC096720.1-201ENST00000604441 183 ntBASIC0.26□□□□□ -2.37
CDH11P55287 RNU6-1244P-201ENST00000363614 108 ntBASIC0.25□□□□□ -2.37
CDH11P55287 RNU6-815P-201ENST00000384080 113 ntBASIC0.25□□□□□ -2.37
CDH11P55287 RNU6-412P-201ENST00000516434 106 ntBASIC0.25□□□□□ -2.37
CDH11P55287 AC141557.1-201ENST00000540982 400 ntBASIC0.25□□□□□ -2.37
CDH11P55287 MIR4514-201ENST00000581410 57 ntBASIC0.25□□□□□ -2.37
CDH11P55287 RNA5SP62-201ENST00000363457 110 ntBASIC0.24□□□□□ -2.37
CDH11P55287 RNU6-243P-201ENST00000391140 107 ntBASIC0.24□□□□□ -2.37
CDH11P55287 AC109327.2-201ENST00000448339 378 ntBASIC0.24□□□□□ -2.37
CDH11P55287 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.24□□□□□ -2.37
CDH11P55287 SNORA62.5-201ENST00000516634 120 ntBASIC0.24□□□□□ -2.37
CDH11P55287 RNA5SP330-201ENST00000517096 96 ntBASIC0.24□□□□□ -2.37
CDH11P55287 AC069113.3-201ENST00000521019 150 ntBASIC0.24□□□□□ -2.37
CDH11P55287 MIR548AG2-201ENST00000581228 64 ntBASIC0.24□□□□□ -2.37
CDH11P55287 Y_RNA.115-201ENST00000363272 98 ntBASIC0.23□□□□□ -2.37
CDH11P55287 Y_RNA.258-201ENST00000364613 105 ntBASIC0.23□□□□□ -2.37
CDH11P55287 Y_RNA.423-201ENST00000384057 113 ntBASIC0.23□□□□□ -2.37
CDH11P55287 MIR181B2-201ENST00000385004 89 ntBASIC0.23□□□□□ -2.37
CDH11P55287 RNU6-1154P-201ENST00000391001 104 ntBASIC0.23□□□□□ -2.37
CDH11P55287 MIR548L-201ENST00000408303 86 ntBASIC0.23□□□□□ -2.37
CDH11P55287 RNU6-1232P-201ENST00000516299 86 ntBASIC0.23□□□□□ -2.37
CDH11P55287 RNU6-313P-201ENST00000516317 112 ntBASIC0.23□□□□□ -2.37
CDH11P55287 RNU6-589P-201ENST00000516485 107 ntBASIC0.23□□□□□ -2.37
CDH11P55287 MIR4439-201ENST00000583746 80 ntBASIC0.23□□□□□ -2.37
CDH11P55287 RNU2-51P-201ENST00000410708 197 ntBASIC0.22□□□□□ -2.37
CDH11P55287 RNU7-13P-201ENST00000516413 62 ntBASIC0.22□□□□□ -2.37
CDH11P55287 MTRNR2L2-201ENST00000604882 87 ntBASIC0.22□□□□□ -2.37
CDH11P55287 RNU6-86P-201ENST00000606534 107 ntBASIC0.22□□□□□ -2.37
CDH11P55287 uc_338.28-201ENST00000612082 187 ntBASIC0.22□□□□□ -2.37
CDH11P55287 SNORA70.25-201ENST00000612741 95 ntBASIC0.22□□□□□ -2.37
CDH11P55287 MIR6129-201ENST00000616087 109 ntBASIC0.22□□□□□ -2.37
CDH11P55287 TRDV1-202ENST00000621643 102 ntBASIC0.22□□□□□ -2.37
CDH11P55287 Y_RNA.78-201ENST00000362970 110 ntBASIC0.21□□□□□ -2.38
CDH11P55287 Y_RNA.95-201ENST00000363079 95 ntBASIC0.21□□□□□ -2.38
CDH11P55287 RNU6-1125P-201ENST00000363601 107 ntBASIC0.21□□□□□ -2.38
CDH11P55287 Y_RNA.163-201ENST00000363702 113 ntBASIC0.21□□□□□ -2.38
CDH11P55287 RNU6-480P-201ENST00000384332 107 ntBASIC0.21□□□□□ -2.38
CDH11P55287 AC073261.1-201ENST00000429409 121 ntBASIC0.21□□□□□ -2.38
CDH11P55287 AL161932.1-201ENST00000437408 146 ntBASIC0.21□□□□□ -2.38
CDH11P55287 RNU6-789P-201ENST00000517105 102 ntBASIC0.21□□□□□ -2.38
CDH11P55287 MIR5706-201ENST00000579841 80 ntBASIC0.21□□□□□ -2.38
CDH11P55287 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
CDH11P55287 RNU6-957P-201ENST00000363652 99 ntBASIC0.2□□□□□ -2.38
CDH11P55287 SNORD115-44-201ENST00000365391 82 ntBASIC0.2□□□□□ -2.38
CDH11P55287 SNORA2A-201ENST00000383885 135 ntBASIC0.2□□□□□ -2.38
CDH11P55287 RNU6-1056P-201ENST00000383996 107 ntBASIC0.2□□□□□ -2.38
CDH11P55287 Y_RNA.601-201ENST00000410500 113 ntBASIC0.2□□□□□ -2.38
CDH11P55287 AL606753.1-201ENST00000427435 87 ntBASIC0.2□□□□□ -2.38
CDH11P55287 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.2□□□□□ -2.38
CDH11P55287 Y_RNA.659-201ENST00000515994 113 ntBASIC0.2□□□□□ -2.38
CDH11P55287 RNU6-904P-201ENST00000516206 101 ntBASIC0.2□□□□□ -2.38
CDH11P55287 RNU6-537P-201ENST00000517277 103 ntBASIC0.2□□□□□ -2.38
CDH11P55287 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
CDH11P55287 AC023932.2-201ENST00000603176 175 ntBASIC0.2□□□□□ -2.38
CDH11P55287 U6.100-201ENST00000636230 99 ntBASIC0.2□□□□□ -2.38
CDH11P55287 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
CDH11P55287 MIR4315-2-201ENST00000640925 73 ntBASIC0.2□□□□□ -2.38
CDH11P55287 AC073869.9-201ENST00000641610 120 ntBASIC0.2□□□□□ -2.38
CDH11P55287 SNORD45B-201ENST00000364617 72 ntBASIC0.19□□□□□ -2.38
CDH11P55287 RNU6-106P-201ENST00000384405 107 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms