Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MIR516A1-201ENST00000385033 90 ntBASIC1.31□□□□□ -2.2
MRE11P49959 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
MRE11P49959 AL161932.1-201ENST00000437408 146 ntBASIC1.31□□□□□ -2.2
MRE11P49959 SNORD92-201ENST00000585078 85 ntBASIC1.31□□□□□ -2.2
MRE11P49959 AC103810.9-201ENST00000606688 112 ntBASIC1.31□□□□□ -2.2
MRE11P49959 AC010487.4-201ENST00000637027 61 ntBASIC1.31□□□□□ -2.2
MRE11P49959 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
MRE11P49959 RNU6-497P-201ENST00000365316 104 ntBASIC1.3□□□□□ -2.2
MRE11P49959 SNORA25-201ENST00000384384 134 ntBASIC1.3□□□□□ -2.2
MRE11P49959 RNU6-1254P-201ENST00000391266 104 ntBASIC1.3□□□□□ -2.2
MRE11P49959 SNORD63B-201ENST00000411005 70 ntBASIC1.3□□□□□ -2.2
MRE11P49959 AC002429.1-201ENST00000437672 148 ntBASIC1.3□□□□□ -2.2
MRE11P49959 AC022137.1-201ENST00000483735 151 ntBASIC1.3□□□□□ -2.2
MRE11P49959 RNU6-633P-201ENST00000362612 103 ntBASIC1.29□□□□□ -2.2
MRE11P49959 Y_RNA.56-201ENST00000362798 112 ntBASIC1.29□□□□□ -2.2
MRE11P49959 SNORD36A-201ENST00000362874 73 ntBASIC1.29□□□□□ -2.2
MRE11P49959 SNORD114-23-201ENST00000363536 72 ntBASIC1.29□□□□□ -2.2
MRE11P49959 RNU6-573P-201ENST00000383938 106 ntBASIC1.29□□□□□ -2.2
MRE11P49959 MIR938-201ENST00000401216 83 ntBASIC1.29□□□□□ -2.2
MRE11P49959 RNU7-106P-201ENST00000459514 67 ntBASIC1.29□□□□□ -2.2
MRE11P49959 MIR4804-201ENST00000581683 73 ntBASIC1.29□□□□□ -2.2
MRE11P49959 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.29□□□□□ -2.2
MRE11P49959 AC211469.2-201ENST00000605461 205 ntBASIC1.29□□□□□ -2.2
MRE11P49959 VTRNA1-3-201ENST00000365645 89 ntBASIC1.28□□□□□ -2.2
MRE11P49959 RNU6-364P-201ENST00000384387 107 ntBASIC1.28□□□□□ -2.2
MRE11P49959 Y_RNA.536-201ENST00000384621 113 ntBASIC1.28□□□□□ -2.2
MRE11P49959 MIR635-201ENST00000384830 98 ntBASIC1.28□□□□□ -2.2
MRE11P49959 RNU6-243P-201ENST00000391140 107 ntBASIC1.28□□□□□ -2.2
MRE11P49959 RNU6-519P-201ENST00000410590 108 ntBASIC1.28□□□□□ -2.2
MRE11P49959 RNU7-102P-201ENST00000458948 62 ntBASIC1.28□□□□□ -2.2
MRE11P49959 Y_RNA.648-201ENST00000459455 110 ntBASIC1.28□□□□□ -2.2
MRE11P49959 AC087343.1-201ENST00000477341 475 ntBASIC1.28□□□□□ -2.2
MRE11P49959 TRAJ51-201ENST00000504127 63 ntBASIC1.28□□□□□ -2.2
MRE11P49959 CYP3A137P-201ENST00000562436 69 ntBASIC1.28□□□□□ -2.2
MRE11P49959 MIR548H5-201ENST00000580314 60 ntBASIC1.28□□□□□ -2.2
MRE11P49959 MIR5588-201ENST00000581890 63 ntBASIC1.28□□□□□ -2.2
MRE11P49959 MIR4295-201ENST00000585286 85 ntBASIC1.28□□□□□ -2.2
MRE11P49959 RNU7-10P-201ENST00000607194 63 ntBASIC1.28□□□□□ -2.2
MRE11P49959 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.28□□□□□ -2.2
MRE11P49959 AC027335.2-201ENST00000624030 375 ntBASIC1.28□□□□□ -2.2
MRE11P49959 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
MRE11P49959 RNU6-509P-201ENST00000363519 107 ntBASIC1.27□□□□□ -2.21
MRE11P49959 MIR100-201ENST00000385259 80 ntBASIC1.27□□□□□ -2.21
MRE11P49959 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
MRE11P49959 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
MRE11P49959 RNU7-85P-201ENST00000458851 63 ntBASIC1.27□□□□□ -2.21
MRE11P49959 RNU6-977P-201ENST00000516411 103 ntBASIC1.27□□□□□ -2.21
MRE11P49959 Y_RNA.697-201ENST00000516776 113 ntBASIC1.27□□□□□ -2.21
MRE11P49959 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
MRE11P49959 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.26□□□□□ -2.21
MRE11P49959 MIR1-1-201ENST00000362147 71 ntBASIC1.26□□□□□ -2.21
MRE11P49959 SNORD115-27-201ENST00000364430 82 ntBASIC1.26□□□□□ -2.21
MRE11P49959 RNU6-979P-201ENST00000383896 107 ntBASIC1.26□□□□□ -2.21
MRE11P49959 MIR519A1-201ENST00000385257 85 ntBASIC1.26□□□□□ -2.21
MRE11P49959 MIR1827-201ENST00000408549 66 ntBASIC1.26□□□□□ -2.21
MRE11P49959 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.26□□□□□ -2.21
MRE11P49959 AC092628.1-201ENST00000436250 252 ntBASIC1.26□□□□□ -2.21
MRE11P49959 RNU7-56P-201ENST00000458744 62 ntBASIC1.26□□□□□ -2.21
MRE11P49959 SNORD4B-201ENST00000459083 72 ntBASIC1.26□□□□□ -2.21
MRE11P49959 snoU13.11-201ENST00000459219 104 ntBASIC1.26□□□□□ -2.21
MRE11P49959 RNU6-448P-201ENST00000517052 107 ntBASIC1.26□□□□□ -2.21
MRE11P49959 AC067940.1-201ENST00000458411 300 ntBASIC1.25□□□□□ -2.21
MRE11P49959 RNU7-195P-201ENST00000458793 62 ntBASIC1.25□□□□□ -2.21
MRE11P49959 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.25□□□□□ -2.21
MRE11P49959 AC008608.1-201ENST00000603910 127 ntBASIC1.25□□□□□ -2.21
MRE11P49959 MIR548BB-201ENST00000626714 66 ntBASIC1.25□□□□□ -2.21
MRE11P49959 MIR1245B-201ENST00000636115 69 ntBASIC1.25□□□□□ -2.21
MRE11P49959 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
MRE11P49959 RNU6-1276P-201ENST00000365372 104 ntBASIC1.24□□□□□ -2.21
MRE11P49959 RNU6-242P-201ENST00000384359 107 ntBASIC1.24□□□□□ -2.21
MRE11P49959 Y_RNA.611-201ENST00000410682 108 ntBASIC1.24□□□□□ -2.21
MRE11P49959 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
MRE11P49959 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
MRE11P49959 MIR373-201ENST00000362273 69 ntBASIC1.23□□□□□ -2.21
MRE11P49959 RNU1-124P-201ENST00000363861 145 ntBASIC1.23□□□□□ -2.21
MRE11P49959 RNU6-291P-201ENST00000384720 107 ntBASIC1.23□□□□□ -2.21
MRE11P49959 MIR520F-201ENST00000384824 87 ntBASIC1.23□□□□□ -2.21
MRE11P49959 RNU1-119P-201ENST00000391122 165 ntBASIC1.23□□□□□ -2.21
MRE11P49959 RNA5SP404-201ENST00000517118 132 ntBASIC1.23□□□□□ -2.21
MRE11P49959 AP003327.1-201ENST00000529684 127 ntBASIC1.23□□□□□ -2.21
MRE11P49959 Y_RNA.219-201ENST00000364232 113 ntBASIC1.22□□□□□ -2.21
MRE11P49959 Y_RNA.283-201ENST00000364798 112 ntBASIC1.22□□□□□ -2.21
MRE11P49959 RNU6-535P-201ENST00000384722 107 ntBASIC1.22□□□□□ -2.21
MRE11P49959 MIR19B1-201ENST00000384829 87 ntBASIC1.22□□□□□ -2.21
MRE11P49959 MIR519C-201ENST00000385053 87 ntBASIC1.22□□□□□ -2.21
MRE11P49959 RNU7-171P-201ENST00000459581 62 ntBASIC1.22□□□□□ -2.21
MRE11P49959 Y_RNA.809-201ENST00000516058 95 ntBASIC1.22□□□□□ -2.21
MRE11P49959 AC006160.2-201ENST00000637708 154 ntBASIC1.22□□□□□ -2.21
MRE11P49959 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
MRE11P49959 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
MRE11P49959 MIR330-201ENST00000362196 94 ntBASIC1.21□□□□□ -2.22
MRE11P49959 RNU6-1260P-201ENST00000362944 107 ntBASIC1.21□□□□□ -2.22
MRE11P49959 RNA5SP245-201ENST00000364239 121 ntBASIC1.21□□□□□ -2.22
MRE11P49959 Y_RNA.426-201ENST00000384068 113 ntBASIC1.21□□□□□ -2.22
MRE11P49959 RNU6-466P-201ENST00000391224 103 ntBASIC1.21□□□□□ -2.22
MRE11P49959 MIR1197-201ENST00000408818 88 ntBASIC1.21□□□□□ -2.22
MRE11P49959 AC097635.1-201ENST00000450678 155 ntBASIC1.21□□□□□ -2.22
MRE11P49959 AC138907.6-201ENST00000568401 126 ntBASIC1.21□□□□□ -2.22
MRE11P49959 AC138869.1-201ENST00000568623 124 ntBASIC1.21□□□□□ -2.22
MRE11P49959 RNU6-957P-201ENST00000363652 99 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 234.6 ms