Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PRIM1P49642 AC106800.4-201ENST00000614905 153 ntBASIC2.44□□□□□ -2.02
PRIM1P49642 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
PRIM1P49642 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
PRIM1P49642 Y_RNA.330-201ENST00000365230 109 ntBASIC2.43□□□□□ -2.02
PRIM1P49642 SNORD115-31-201ENST00000365318 82 ntBASIC2.43□□□□□ -2.02
PRIM1P49642 MIR938-201ENST00000401216 83 ntBASIC2.43□□□□□ -2.02
PRIM1P49642 AC244505.6-201ENST00000452829 130 ntBASIC2.43□□□□□ -2.02
PRIM1P49642 AC019176.1-201ENST00000518519 225 ntBASIC2.43□□□□□ -2.02
PRIM1P49642 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.43□□□□□ -2.02
PRIM1P49642 AL512310.8-201ENST00000550183 120 ntBASIC2.43□□□□□ -2.02
PRIM1P49642 MIR4303-201ENST00000581299 66 ntBASIC2.43□□□□□ -2.02
PRIM1P49642 MIR3140-201ENST00000583685 90 ntBASIC2.43□□□□□ -2.02
PRIM1P49642 AL645939.4-201ENST00000604495 135 ntBASIC2.43□□□□□ -2.02
PRIM1P49642 AL359821.1-201ENST00000605519 182 ntBASIC2.43□□□□□ -2.02
PRIM1P49642 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.43□□□□□ -2.02
PRIM1P49642 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRIM1P49642 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PRIM1P49642 MIR337-201ENST00000362281 93 ntBASIC2.42□□□□□ -2.02
PRIM1P49642 SNORA25.4-201ENST00000363666 124 ntBASIC2.42□□□□□ -2.02
PRIM1P49642 SNORA16B-201ENST00000364674 135 ntBASIC2.42□□□□□ -2.02
PRIM1P49642 Y_RNA.355-201ENST00000365462 98 ntBASIC2.42□□□□□ -2.02
PRIM1P49642 RNU6-274P-201ENST00000459566 107 ntBASIC2.42□□□□□ -2.02
PRIM1P49642 TRMT112P2-201ENST00000512910 132 ntBASIC2.42□□□□□ -2.02
PRIM1P49642 AC008608.1-201ENST00000603910 127 ntBASIC2.42□□□□□ -2.02
PRIM1P49642 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PRIM1P49642 RNU6-330P-201ENST00000363015 107 ntBASIC2.41□□□□□ -2.02
PRIM1P49642 MIR17-201ENST00000385012 84 ntBASIC2.41□□□□□ -2.02
PRIM1P49642 AL591704.2-201ENST00000421658 181 ntBASIC2.41□□□□□ -2.02
PRIM1P49642 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.41□□□□□ -2.02
PRIM1P49642 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
PRIM1P49642 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.4□□□□□ -2.02
PRIM1P49642 Y_RNA.118-201ENST00000363300 101 ntBASIC2.4□□□□□ -2.03
PRIM1P49642 RNU6-1177P-201ENST00000391058 104 ntBASIC2.4□□□□□ -2.03
PRIM1P49642 RNA5SP233-201ENST00000459153 113 ntBASIC2.4□□□□□ -2.03
PRIM1P49642 snoU13.21-201ENST00000459368 105 ntBASIC2.4□□□□□ -2.03
PRIM1P49642 RNU6-165P-201ENST00000517170 99 ntBASIC2.4□□□□□ -2.03
PRIM1P49642 MIR4676-201ENST00000583078 72 ntBASIC2.4□□□□□ -2.03
PRIM1P49642 ZNF209P-201ENST00000593450 2304 ntBASIC2.4□□□□□ -2.03
PRIM1P49642 MIR499A-201ENST00000384903 122 ntBASIC2.39□□□□□ -2.03
PRIM1P49642 MIR4422-201ENST00000581938 83 ntBASIC2.39□□□□□ -2.03
PRIM1P49642 AC027335.2-201ENST00000624030 375 ntBASIC2.39□□□□□ -2.03
PRIM1P49642 RNU6-630P-201ENST00000391258 106 ntBASIC2.38□□□□□ -2.03
PRIM1P49642 RNU6-881P-201ENST00000516813 102 ntBASIC2.38□□□□□ -2.03
PRIM1P49642 RNA5SP364-201ENST00000516938 78 ntBASIC2.38□□□□□ -2.03
PRIM1P49642 AC005520.4-201ENST00000604337 90 ntBASIC2.38□□□□□ -2.03
PRIM1P49642 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
PRIM1P49642 SNORD45.1-201ENST00000363181 77 ntBASIC2.37□□□□□ -2.03
PRIM1P49642 Y_RNA.174-201ENST00000363781 105 ntBASIC2.37□□□□□ -2.03
PRIM1P49642 SUMO2P12-201ENST00000405924 140 ntBASIC2.37□□□□□ -2.03
PRIM1P49642 RN7SKP88-201ENST00000516847 250 ntBASIC2.37□□□□□ -2.03
PRIM1P49642 7SK.8-201ENST00000612110 250 ntBASIC2.37□□□□□ -2.03
PRIM1P49642 7SK.11-201ENST00000615477 250 ntBASIC2.37□□□□□ -2.03
PRIM1P49642 7SK.13-201ENST00000622040 250 ntBASIC2.37□□□□□ -2.03
PRIM1P49642 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRIM1P49642 RNU6-824P-201ENST00000363724 104 ntBASIC2.36□□□□□ -2.03
PRIM1P49642 Y_RNA.443-201ENST00000384135 111 ntBASIC2.36□□□□□ -2.03
PRIM1P49642 SNORA80D-201ENST00000384488 135 ntBASIC2.36□□□□□ -2.03
PRIM1P49642 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PRIM1P49642 RNU1-78P-201ENST00000391248 165 ntBASIC2.36□□□□□ -2.03
PRIM1P49642 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.36□□□□□ -2.03
PRIM1P49642 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.36□□□□□ -2.03
PRIM1P49642 uc_338.20-201ENST00000621563 178 ntBASIC2.36□□□□□ -2.03
PRIM1P49642 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRIM1P49642 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
PRIM1P49642 RNU6-1216P-201ENST00000362590 107 ntBASIC2.35□□□□□ -2.03
PRIM1P49642 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PRIM1P49642 RNU7-13P-201ENST00000516413 62 ntBASIC2.35□□□□□ -2.03
PRIM1P49642 AC103706.3-201ENST00000636297 85 ntBASIC2.35□□□□□ -2.03
PRIM1P49642 SNORA67.5-201ENST00000391036 107 ntBASIC2.34□□□□□ -2.03
PRIM1P49642 RNU6-994P-201ENST00000410507 111 ntBASIC2.34□□□□□ -2.03
PRIM1P49642 AL356379.1-201ENST00000414105 126 ntBASIC2.34□□□□□ -2.03
PRIM1P49642 AC048334.1-201ENST00000477975 159 ntBASIC2.34□□□□□ -2.03
PRIM1P49642 SNORA31.2-201ENST00000516019 134 ntBASIC2.34□□□□□ -2.03
PRIM1P49642 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
PRIM1P49642 RNU1-119P-201ENST00000391122 165 ntBASIC2.33□□□□□ -2.04
PRIM1P49642 SNORA75.2-201ENST00000391138 150 ntBASIC2.33□□□□□ -2.04
PRIM1P49642 SNORA75.3-201ENST00000391231 150 ntBASIC2.33□□□□□ -2.04
PRIM1P49642 RNU7-90P-201ENST00000459216 62 ntBASIC2.33□□□□□ -2.04
PRIM1P49642 RNU6-287P-201ENST00000516230 98 ntBASIC2.33□□□□□ -2.04
PRIM1P49642 RNU7-40P-201ENST00000516397 64 ntBASIC2.33□□□□□ -2.04
PRIM1P49642 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.33□□□□□ -2.04
PRIM1P49642 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.32□□□□□ -2.04
PRIM1P49642 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.32□□□□□ -2.04
PRIM1P49642 RNU7-102P-201ENST00000458948 62 ntBASIC2.32□□□□□ -2.04
PRIM1P49642 RNU7-95P-201ENST00000459222 64 ntBASIC2.32□□□□□ -2.04
PRIM1P49642 RNA5SP489-201ENST00000410986 109 ntBASIC2.31□□□□□ -2.04
PRIM1P49642 RNU6-1052P-201ENST00000411398 104 ntBASIC2.31□□□□□ -2.04
PRIM1P49642 RNU7-21P-201ENST00000459430 62 ntBASIC2.31□□□□□ -2.04
PRIM1P49642 RNU6-977P-201ENST00000516411 103 ntBASIC2.31□□□□□ -2.04
PRIM1P49642 RNU6-719P-201ENST00000516671 104 ntBASIC2.31□□□□□ -2.04
PRIM1P49642 MIR4255-201ENST00000579351 72 ntBASIC2.31□□□□□ -2.04
PRIM1P49642 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.31□□□□□ -2.04
PRIM1P49642 MIR4773-1-201ENST00000637203 78 ntBASIC2.31□□□□□ -2.04
PRIM1P49642 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.31□□□□□ -2.04
PRIM1P49642 SNORD115-22-201ENST00000364456 82 ntBASIC2.3□□□□□ -2.04
PRIM1P49642 SNORD45A-201ENST00000384512 84 ntBASIC2.3□□□□□ -2.04
PRIM1P49642 AC067940.1-201ENST00000458411 300 ntBASIC2.3□□□□□ -2.04
PRIM1P49642 RNU7-24P-201ENST00000458867 62 ntBASIC2.3□□□□□ -2.04
PRIM1P49642 MIR4804-201ENST00000581683 73 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms