Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 SNORA75.3-201ENST00000391231 150 ntBASIC0.97□□□□□ -2.25
HOXC13P31276 MIR942-201ENST00000401111 86 ntBASIC0.97□□□□□ -2.25
HOXC13P31276 MIR1302-7-201ENST00000408841 72 ntBASIC0.97□□□□□ -2.25
HOXC13P31276 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.97□□□□□ -2.25
HOXC13P31276 AL450471.1-201ENST00000447509 127 ntBASIC0.97□□□□□ -2.25
HOXC13P31276 SNORD4B-201ENST00000459083 72 ntBASIC0.97□□□□□ -2.25
HOXC13P31276 SNORA25.13-201ENST00000516395 103 ntBASIC0.97□□□□□ -2.25
HOXC13P31276 AP000753.3-201ENST00000604083 169 ntBASIC0.97□□□□□ -2.25
HOXC13P31276 MIR6740-201ENST00000618268 113 ntBASIC0.97□□□□□ -2.25
HOXC13P31276 Y_RNA.330-201ENST00000365230 109 ntBASIC0.96□□□□□ -2.26
HOXC13P31276 RNU6-396P-201ENST00000365369 105 ntBASIC0.96□□□□□ -2.26
HOXC13P31276 Y_RNA.565-201ENST00000384719 101 ntBASIC0.96□□□□□ -2.26
HOXC13P31276 MIR1236-201ENST00000408340 102 ntBASIC0.96□□□□□ -2.26
HOXC13P31276 RNA5SP95-201ENST00000410319 137 ntBASIC0.96□□□□□ -2.26
HOXC13P31276 AC073261.1-201ENST00000429409 121 ntBASIC0.96□□□□□ -2.26
HOXC13P31276 RNU7-85P-201ENST00000458851 63 ntBASIC0.96□□□□□ -2.26
HOXC13P31276 snoU13.25-201ENST00000458945 104 ntBASIC0.96□□□□□ -2.26
HOXC13P31276 uc_338.6-201ENST00000613544 171 ntBASIC0.96□□□□□ -2.26
HOXC13P31276 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
HOXC13P31276 MIR103A2-201ENST00000362154 78 ntBASIC0.95□□□□□ -2.26
HOXC13P31276 MIR30D-201ENST00000362283 70 ntBASIC0.95□□□□□ -2.26
HOXC13P31276 RNU6-478P-201ENST00000363904 110 ntBASIC0.95□□□□□ -2.26
HOXC13P31276 RNA5SP48-201ENST00000363969 126 ntBASIC0.95□□□□□ -2.26
HOXC13P31276 MIR516A2-201ENST00000384888 90 ntBASIC0.95□□□□□ -2.26
HOXC13P31276 MIR516A1-201ENST00000385033 90 ntBASIC0.95□□□□□ -2.26
HOXC13P31276 MIR216A-201ENST00000385063 110 ntBASIC0.95□□□□□ -2.26
HOXC13P31276 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
HOXC13P31276 RNU6-129P-201ENST00000391022 107 ntBASIC0.95□□□□□ -2.26
HOXC13P31276 RNU6-1165P-201ENST00000410119 107 ntBASIC0.95□□□□□ -2.26
HOXC13P31276 FABP5P4-201ENST00000437203 171 ntBASIC0.95□□□□□ -2.26
HOXC13P31276 SNRPGP12-201ENST00000449481 213 ntBASIC0.95□□□□□ -2.26
HOXC13P31276 RNU7-62P-201ENST00000458856 62 ntBASIC0.95□□□□□ -2.26
HOXC13P31276 snoU13.11-201ENST00000459219 104 ntBASIC0.95□□□□□ -2.26
HOXC13P31276 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.95□□□□□ -2.26
HOXC13P31276 RNU6-1229P-201ENST00000364295 107 ntBASIC0.94□□□□□ -2.26
HOXC13P31276 MIR563-201ENST00000385080 79 ntBASIC0.94□□□□□ -2.26
HOXC13P31276 AC139453.2-201ENST00000487255 133 ntBASIC0.94□□□□□ -2.26
HOXC13P31276 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
HOXC13P31276 RNU6-531P-201ENST00000516694 104 ntBASIC0.94□□□□□ -2.26
HOXC13P31276 SNORA25.16-201ENST00000516741 121 ntBASIC0.94□□□□□ -2.26
HOXC13P31276 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.94□□□□□ -2.26
HOXC13P31276 MIR4536-1-201ENST00000583537 88 ntBASIC0.94□□□□□ -2.26
HOXC13P31276 AC145423.2-201ENST00000610631 239 ntBASIC0.94□□□□□ -2.26
HOXC13P31276 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.94□□□□□ -2.26
HOXC13P31276 MIR6516-201ENST00000630554 81 ntBASIC0.94□□□□□ -2.26
HOXC13P31276 RNU6-654P-201ENST00000364373 107 ntBASIC0.93□□□□□ -2.26
HOXC13P31276 SNORA72.6-201ENST00000384520 129 ntBASIC0.93□□□□□ -2.26
HOXC13P31276 MIR608-201ENST00000384820 100 ntBASIC0.93□□□□□ -2.26
HOXC13P31276 RNA5SP292-201ENST00000390974 118 ntBASIC0.93□□□□□ -2.26
HOXC13P31276 SNORD93-201ENST00000408813 74 ntBASIC0.93□□□□□ -2.26
HOXC13P31276 RNU7-106P-201ENST00000459514 67 ntBASIC0.93□□□□□ -2.26
HOXC13P31276 Y_RNA.788-201ENST00000622394 112 ntBASIC0.93□□□□□ -2.26
HOXC13P31276 SNORD36A-201ENST00000362874 73 ntBASIC0.92□□□□□ -2.26
HOXC13P31276 RNU6-161P-201ENST00000363051 106 ntBASIC0.92□□□□□ -2.26
HOXC13P31276 RNU6-403P-201ENST00000363163 104 ntBASIC0.92□□□□□ -2.26
HOXC13P31276 RNU6-571P-201ENST00000384128 107 ntBASIC0.92□□□□□ -2.26
HOXC13P31276 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.92□□□□□ -2.26
HOXC13P31276 MIR1185-1-201ENST00000408598 86 ntBASIC0.92□□□□□ -2.26
HOXC13P31276 Y_RNA.648-201ENST00000459455 110 ntBASIC0.92□□□□□ -2.26
HOXC13P31276 PSMC1P5-201ENST00000512850 177 ntBASIC0.92□□□□□ -2.26
HOXC13P31276 RNU6-1108P-201ENST00000516308 104 ntBASIC0.92□□□□□ -2.26
HOXC13P31276 MIR2115-201ENST00000516657 100 ntBASIC0.92□□□□□ -2.26
HOXC13P31276 AP003716.2-201ENST00000528260 108 ntBASIC0.92□□□□□ -2.26
HOXC13P31276 MIR4796-201ENST00000580742 81 ntBASIC0.92□□□□□ -2.26
HOXC13P31276 MIR4491-201ENST00000581087 68 ntBASIC0.92□□□□□ -2.26
HOXC13P31276 MIR4264-201ENST00000583520 66 ntBASIC0.92□□□□□ -2.26
HOXC13P31276 U7.4-201ENST00000614961 63 ntBASIC0.92□□□□□ -2.26
HOXC13P31276 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
HOXC13P31276 RNU6-1094P-201ENST00000362416 104 ntBASIC0.91□□□□□ -2.26
HOXC13P31276 RNU6-315P-201ENST00000362666 107 ntBASIC0.91□□□□□ -2.26
HOXC13P31276 RNU6-624P-201ENST00000363411 107 ntBASIC0.91□□□□□ -2.26
HOXC13P31276 RNU6-132P-201ENST00000383863 107 ntBASIC0.91□□□□□ -2.26
HOXC13P31276 RNU6-811P-201ENST00000384069 107 ntBASIC0.91□□□□□ -2.26
HOXC13P31276 RNU6-243P-201ENST00000391140 107 ntBASIC0.91□□□□□ -2.26
HOXC13P31276 RNU6-1254P-201ENST00000391266 104 ntBASIC0.91□□□□□ -2.26
HOXC13P31276 snoU13.21-201ENST00000459368 105 ntBASIC0.91□□□□□ -2.26
HOXC13P31276 SNORA18.5-201ENST00000516616 101 ntBASIC0.91□□□□□ -2.26
HOXC13P31276 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.91□□□□□ -2.26
HOXC13P31276 MIRLET7F1-201ENST00000362202 87 ntBASIC0.9□□□□□ -2.27
HOXC13P31276 SNORA63.2-201ENST00000362603 126 ntBASIC0.9□□□□□ -2.27
HOXC13P31276 RNU6-957P-201ENST00000363652 99 ntBASIC0.9□□□□□ -2.27
HOXC13P31276 Y_RNA.283-201ENST00000364798 112 ntBASIC0.9□□□□□ -2.27
HOXC13P31276 Y_RNA.588-201ENST00000391254 102 ntBASIC0.9□□□□□ -2.27
HOXC13P31276 SNORD63B-201ENST00000411005 70 ntBASIC0.9□□□□□ -2.27
HOXC13P31276 AC015818.7-201ENST00000428754 109 ntBASIC0.9□□□□□ -2.27
HOXC13P31276 SCARNA18B-201ENST00000458806 135 ntBASIC0.9□□□□□ -2.27
HOXC13P31276 RNU6-75P-201ENST00000515944 104 ntBASIC0.9□□□□□ -2.27
HOXC13P31276 RNU11-2P-201ENST00000516898 142 ntBASIC0.9□□□□□ -2.27
HOXC13P31276 MIR4484-201ENST00000582855 83 ntBASIC0.9□□□□□ -2.27
HOXC13P31276 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
HOXC13P31276 MIRLET7A1-201ENST00000362295 80 ntBASIC0.89□□□□□ -2.27
HOXC13P31276 RNU4-58P-201ENST00000363192 141 ntBASIC0.89□□□□□ -2.27
HOXC13P31276 MT-TF-201ENST00000387314 71 ntBASIC0.89□□□□□ -2.27
HOXC13P31276 MT-TN-201ENST00000387400 73 ntBASIC0.89□□□□□ -2.27
HOXC13P31276 SNORD90-201ENST00000391145 111 ntBASIC0.89□□□□□ -2.27
HOXC13P31276 AC013244.2-201ENST00000603396 103 ntBASIC0.89□□□□□ -2.27
HOXC13P31276 AC023934.1-201ENST00000574529 2389 ntBASIC0.88□□□□□ -2.27
HOXC13P31276 RNU6-686P-201ENST00000364839 107 ntBASIC0.88□□□□□ -2.27
HOXC13P31276 Y_RNA.491-201ENST00000384417 107 ntBASIC0.88□□□□□ -2.27
HOXC13P31276 Y_RNA.545-201ENST00000384652 105 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms