Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AC036111.3-201ENST00000526389 112 ntBASIC2.46□□□□□ -2.02
COL9A1P20849 MIR4446-201ENST00000578505 67 ntBASIC2.46□□□□□ -2.02
COL9A1P20849 MIR8063-201ENST00000621930 81 ntBASIC2.46□□□□□ -2.02
COL9A1P20849 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
COL9A1P20849 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
COL9A1P20849 SNORA25.5-201ENST00000363782 126 ntBASIC2.45□□□□□ -2.02
COL9A1P20849 RNA5SP456-201ENST00000364002 114 ntBASIC2.45□□□□□ -2.02
COL9A1P20849 RNU6-1065P-201ENST00000384513 106 ntBASIC2.45□□□□□ -2.02
COL9A1P20849 SNORD111-201ENST00000408139 94 ntBASIC2.45□□□□□ -2.02
COL9A1P20849 RPS26P5-201ENST00000418544 335 ntBASIC2.45□□□□□ -2.02
COL9A1P20849 MIR6509-201ENST00000614603 85 ntBASIC2.45□□□□□ -2.02
COL9A1P20849 MIR6515-201ENST00000619843 57 ntBASIC2.45□□□□□ -2.02
COL9A1P20849 MIR219B-201ENST00000637023 88 ntBASIC2.45□□□□□ -2.02
COL9A1P20849 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.45□□□□□ -2.02
COL9A1P20849 RNU6-446P-201ENST00000362827 106 ntBASIC2.44□□□□□ -2.02
COL9A1P20849 SNORA67.1-201ENST00000364749 141 ntBASIC2.44□□□□□ -2.02
COL9A1P20849 MIR938-201ENST00000401216 83 ntBASIC2.44□□□□□ -2.02
COL9A1P20849 MIR4676-201ENST00000583078 72 ntBASIC2.44□□□□□ -2.02
COL9A1P20849 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.44□□□□□ -2.02
COL9A1P20849 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
COL9A1P20849 Y_RNA.330-201ENST00000365230 109 ntBASIC2.43□□□□□ -2.02
COL9A1P20849 MIR583-201ENST00000384846 75 ntBASIC2.43□□□□□ -2.02
COL9A1P20849 AC026436.1-201ENST00000510537 270 ntBASIC2.43□□□□□ -2.02
COL9A1P20849 PVT1_3.1-201ENST00000620853 95 ntBASIC2.43□□□□□ -2.02
COL9A1P20849 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
COL9A1P20849 AC080100.1-201ENST00000624239 5356 ntBASIC2.42□□□□□ -2.02
COL9A1P20849 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
COL9A1P20849 MIR302D-201ENST00000362275 68 ntBASIC2.42□□□□□ -2.02
COL9A1P20849 RNA5SP37-201ENST00000365420 130 ntBASIC2.42□□□□□ -2.02
COL9A1P20849 snoU13.9-201ENST00000458927 103 ntBASIC2.42□□□□□ -2.02
COL9A1P20849 AC079140.2-201ENST00000506193 142 ntBASIC2.42□□□□□ -2.02
COL9A1P20849 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.42□□□□□ -2.02
COL9A1P20849 MIR466-201ENST00000580653 84 ntBASIC2.42□□□□□ -2.02
COL9A1P20849 AC027335.2-201ENST00000624030 375 ntBASIC2.42□□□□□ -2.02
COL9A1P20849 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL9A1P20849 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL9A1P20849 RNU6-1126P-201ENST00000384002 107 ntBASIC2.41□□□□□ -2.02
COL9A1P20849 AC106800.4-201ENST00000614905 153 ntBASIC2.41□□□□□ -2.02
COL9A1P20849 MIR1291-201ENST00000627649 87 ntBASIC2.41□□□□□ -2.02
COL9A1P20849 RNU6-369P-201ENST00000362515 102 ntBASIC2.4□□□□□ -2.03
COL9A1P20849 SNORD113-4-201ENST00000364802 75 ntBASIC2.4□□□□□ -2.03
COL9A1P20849 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
COL9A1P20849 FO624990.1-201ENST00000636373 85 ntBASIC2.4□□□□□ -2.03
COL9A1P20849 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
COL9A1P20849 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL9A1P20849 SNORD1A-201ENST00000364968 72 ntBASIC2.39□□□□□ -2.03
COL9A1P20849 SNORD88.1-201ENST00000408684 91 ntBASIC2.39□□□□□ -2.03
COL9A1P20849 RNU4-62P-201ENST00000410125 130 ntBASIC2.39□□□□□ -2.03
COL9A1P20849 SCARNA21.1-201ENST00000515996 128 ntBASIC2.39□□□□□ -2.03
COL9A1P20849 RNU6-165P-201ENST00000517170 99 ntBASIC2.39□□□□□ -2.03
COL9A1P20849 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
COL9A1P20849 MIR617-201ENST00000385030 97 ntBASIC2.38□□□□□ -2.03
COL9A1P20849 RNU7-102P-201ENST00000458948 62 ntBASIC2.38□□□□□ -2.03
COL9A1P20849 RNU7-40P-201ENST00000516397 64 ntBASIC2.38□□□□□ -2.03
COL9A1P20849 MIR548O2-201ENST00000616090 70 ntBASIC2.38□□□□□ -2.03
COL9A1P20849 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
COL9A1P20849 RNA5SP403-201ENST00000363598 108 ntBASIC2.37□□□□□ -2.03
COL9A1P20849 RNA5SP192-201ENST00000364404 120 ntBASIC2.37□□□□□ -2.03
COL9A1P20849 SNORA44.1-201ENST00000517031 108 ntBASIC2.37□□□□□ -2.03
COL9A1P20849 RNA5SP215-201ENST00000363440 122 ntBASIC2.36□□□□□ -2.03
COL9A1P20849 Y_RNA.174-201ENST00000363781 105 ntBASIC2.36□□□□□ -2.03
COL9A1P20849 RNU6-645P-201ENST00000364649 106 ntBASIC2.36□□□□□ -2.03
COL9A1P20849 AC019176.1-201ENST00000518519 225 ntBASIC2.36□□□□□ -2.03
COL9A1P20849 NAMPTP3-201ENST00000569273 224 ntBASIC2.36□□□□□ -2.03
COL9A1P20849 MIR3937-201ENST00000580135 106 ntBASIC2.36□□□□□ -2.03
COL9A1P20849 MIR548AG2-201ENST00000581228 64 ntBASIC2.36□□□□□ -2.03
COL9A1P20849 AC022709.1-201ENST00000615967 87 ntBASIC2.36□□□□□ -2.03
COL9A1P20849 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
COL9A1P20849 MIR3657-201ENST00000584818 117 ntBASIC2.35□□□□□ -2.03
COL9A1P20849 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.35□□□□□ -2.03
COL9A1P20849 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
COL9A1P20849 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL9A1P20849 SNORD115-24-201ENST00000363528 82 ntBASIC2.34□□□□□ -2.03
COL9A1P20849 Y_RNA.379-201ENST00000365653 102 ntBASIC2.34□□□□□ -2.03
COL9A1P20849 MIR4287-201ENST00000579398 78 ntBASIC2.34□□□□□ -2.03
COL9A1P20849 MIR4285-201ENST00000581001 85 ntBASIC2.34□□□□□ -2.03
COL9A1P20849 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL9A1P20849 Y_RNA.68-201ENST00000362881 102 ntBASIC2.33□□□□□ -2.04
COL9A1P20849 MIR203A-201ENST00000384836 110 ntBASIC2.33□□□□□ -2.04
COL9A1P20849 MIR30A-201ENST00000385092 71 ntBASIC2.33□□□□□ -2.04
COL9A1P20849 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
COL9A1P20849 RNU1-119P-201ENST00000391122 165 ntBASIC2.33□□□□□ -2.04
COL9A1P20849 SNORA75.2-201ENST00000391138 150 ntBASIC2.33□□□□□ -2.04
COL9A1P20849 SNORA75.3-201ENST00000391231 150 ntBASIC2.33□□□□□ -2.04
COL9A1P20849 AC067940.1-201ENST00000458411 300 ntBASIC2.33□□□□□ -2.04
COL9A1P20849 MIR4804-201ENST00000581683 73 ntBASIC2.33□□□□□ -2.04
COL9A1P20849 MIR5194-201ENST00000582634 120 ntBASIC2.33□□□□□ -2.04
COL9A1P20849 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.33□□□□□ -2.04
COL9A1P20849 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL9A1P20849 RNU6-260P-201ENST00000384092 107 ntBASIC2.32□□□□□ -2.04
COL9A1P20849 SNORD13-201ENST00000459299 104 ntBASIC2.32□□□□□ -2.04
COL9A1P20849 AC048334.1-201ENST00000477975 159 ntBASIC2.32□□□□□ -2.04
COL9A1P20849 AL512310.8-201ENST00000550183 120 ntBASIC2.32□□□□□ -2.04
COL9A1P20849 MIR5007-201ENST00000583098 95 ntBASIC2.32□□□□□ -2.04
COL9A1P20849 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
COL9A1P20849 RNA5SP190-201ENST00000365222 118 ntBASIC2.31□□□□□ -2.04
COL9A1P20849 RNU6-302P-201ENST00000365249 107 ntBASIC2.31□□□□□ -2.04
COL9A1P20849 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
COL9A1P20849 AL591704.2-201ENST00000421658 181 ntBASIC2.31□□□□□ -2.04
COL9A1P20849 uc_338.16-201ENST00000621804 95 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 250.2 ms