Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RNU6-795P-201ENST00000516323 103 ntBASIC0.48□□□□□ -2.33
HLA-DOBP13765 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
HLA-DOBP13765 MIR4777-201ENST00000583710 86 ntBASIC0.48□□□□□ -2.33
HLA-DOBP13765 MIR151B-201ENST00000584249 96 ntBASIC0.48□□□□□ -2.33
HLA-DOBP13765 AC012531.4-201ENST00000616509 177 ntBASIC0.48□□□□□ -2.33
HLA-DOBP13765 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
HLA-DOBP13765 Y_RNA.93-201ENST00000363066 109 ntBASIC0.47□□□□□ -2.33
HLA-DOBP13765 Y_RNA.107-201ENST00000363190 121 ntBASIC0.47□□□□□ -2.33
HLA-DOBP13765 Y_RNA.224-201ENST00000364308 111 ntBASIC0.47□□□□□ -2.33
HLA-DOBP13765 RNU6-44P-201ENST00000384045 107 ntBASIC0.47□□□□□ -2.33
HLA-DOBP13765 Y_RNA.467-201ENST00000384297 102 ntBASIC0.47□□□□□ -2.33
HLA-DOBP13765 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
HLA-DOBP13765 RNU7-104P-201ENST00000459398 79 ntBASIC0.47□□□□□ -2.33
HLA-DOBP13765 RNU6-1265P-201ENST00000516342 103 ntBASIC0.47□□□□□ -2.33
HLA-DOBP13765 Y_RNA.705-201ENST00000516862 110 ntBASIC0.47□□□□□ -2.33
HLA-DOBP13765 AC067863.3-201ENST00000624172 122 ntBASIC0.47□□□□□ -2.33
HLA-DOBP13765 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.47□□□□□ -2.33
HLA-DOBP13765 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
HLA-DOBP13765 MIR450A1-201ENST00000362262 91 ntBASIC0.46□□□□□ -2.34
HLA-DOBP13765 SNORA63.4-201ENST00000362763 126 ntBASIC0.46□□□□□ -2.34
HLA-DOBP13765 SNORD118-201ENST00000363593 134 ntBASIC0.46□□□□□ -2.34
HLA-DOBP13765 Y_RNA.466-201ENST00000384294 113 ntBASIC0.46□□□□□ -2.34
HLA-DOBP13765 MIR518A1-201ENST00000385068 85 ntBASIC0.46□□□□□ -2.34
HLA-DOBP13765 RNU6-972P-201ENST00000391208 107 ntBASIC0.46□□□□□ -2.34
HLA-DOBP13765 MIR5000-201ENST00000577717 103 ntBASIC0.46□□□□□ -2.34
HLA-DOBP13765 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
HLA-DOBP13765 RNU6-644P-201ENST00000391155 98 ntBASIC0.45□□□□□ -2.34
HLA-DOBP13765 MIR548L-201ENST00000408303 86 ntBASIC0.45□□□□□ -2.34
HLA-DOBP13765 AC098934.3-201ENST00000430450 190 ntBASIC0.45□□□□□ -2.34
HLA-DOBP13765 Y_RNA.676-201ENST00000516393 96 ntBASIC0.45□□□□□ -2.34
HLA-DOBP13765 RNU6-158P-201ENST00000517104 100 ntBASIC0.45□□□□□ -2.34
HLA-DOBP13765 MIR548Z-201ENST00000584743 97 ntBASIC0.45□□□□□ -2.34
HLA-DOBP13765 AC103810.7-201ENST00000607821 91 ntBASIC0.45□□□□□ -2.34
HLA-DOBP13765 MIR7107-201ENST00000611489 80 ntBASIC0.45□□□□□ -2.34
HLA-DOBP13765 AC025521.1-201ENST00000621624 286 ntBASIC0.45□□□□□ -2.34
HLA-DOBP13765 RNU6-726P-201ENST00000364680 107 ntBASIC0.44□□□□□ -2.34
HLA-DOBP13765 SNORD41.1-201ENST00000391000 69 ntBASIC0.44□□□□□ -2.34
HLA-DOBP13765 RNU6-466P-201ENST00000391224 103 ntBASIC0.44□□□□□ -2.34
HLA-DOBP13765 RNU6-887P-201ENST00000410660 100 ntBASIC0.44□□□□□ -2.34
HLA-DOBP13765 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.44□□□□□ -2.34
HLA-DOBP13765 Y_RNA.648-201ENST00000459455 110 ntBASIC0.44□□□□□ -2.34
HLA-DOBP13765 RNU6-109P-201ENST00000516364 107 ntBASIC0.44□□□□□ -2.34
HLA-DOBP13765 RNU7-13P-201ENST00000516413 62 ntBASIC0.44□□□□□ -2.34
HLA-DOBP13765 RNU6-184P-201ENST00000516514 107 ntBASIC0.44□□□□□ -2.34
HLA-DOBP13765 AL513043.2-201ENST00000573941 143 ntBASIC0.44□□□□□ -2.34
HLA-DOBP13765 SNORA25.18-201ENST00000607153 114 ntBASIC0.44□□□□□ -2.34
HLA-DOBP13765 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.44□□□□□ -2.34
HLA-DOBP13765 TRDV1-202ENST00000621643 102 ntBASIC0.44□□□□□ -2.34
HLA-DOBP13765 SNORD115-44-201ENST00000365391 82 ntBASIC0.43□□□□□ -2.34
HLA-DOBP13765 RNU6-716P-201ENST00000365621 103 ntBASIC0.43□□□□□ -2.34
HLA-DOBP13765 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
HLA-DOBP13765 MIR2052-201ENST00000636055 55 ntBASIC0.43□□□□□ -2.34
HLA-DOBP13765 RNU6-32P-201ENST00000383948 107 ntBASIC0.42□□□□□ -2.34
HLA-DOBP13765 RNU6-147P-201ENST00000383983 107 ntBASIC0.42□□□□□ -2.34
HLA-DOBP13765 RNU6-1126P-201ENST00000384002 107 ntBASIC0.42□□□□□ -2.34
HLA-DOBP13765 RNU6-13P-201ENST00000384248 107 ntBASIC0.42□□□□□ -2.34
HLA-DOBP13765 RNU6-12P-201ENST00000384604 107 ntBASIC0.42□□□□□ -2.34
HLA-DOBP13765 RNU6-41P-201ENST00000384741 107 ntBASIC0.42□□□□□ -2.34
HLA-DOBP13765 RNU6-863P-201ENST00000515989 104 ntBASIC0.42□□□□□ -2.34
HLA-DOBP13765 RNU6-229P-201ENST00000516614 102 ntBASIC0.42□□□□□ -2.34
HLA-DOBP13765 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
HLA-DOBP13765 RNA5SP347-201ENST00000362445 119 ntBASIC0.41□□□□□ -2.34
HLA-DOBP13765 RNU6-957P-201ENST00000363652 99 ntBASIC0.41□□□□□ -2.34
HLA-DOBP13765 Y_RNA.226-201ENST00000364337 114 ntBASIC0.41□□□□□ -2.34
HLA-DOBP13765 Y_RNA.283-201ENST00000364798 112 ntBASIC0.41□□□□□ -2.34
HLA-DOBP13765 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.41□□□□□ -2.34
HLA-DOBP13765 RNA5SP247-201ENST00000411181 105 ntBASIC0.41□□□□□ -2.34
HLA-DOBP13765 RNU7-74P-201ENST00000459104 62 ntBASIC0.41□□□□□ -2.34
HLA-DOBP13765 RNU6-1223P-201ENST00000517124 104 ntBASIC0.41□□□□□ -2.34
HLA-DOBP13765 MIR3920-201ENST00000581751 86 ntBASIC0.41□□□□□ -2.34
HLA-DOBP13765 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.41□□□□□ -2.34
HLA-DOBP13765 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
HLA-DOBP13765 Y_RNA.596-201ENST00000410462 109 ntBASIC0.4□□□□□ -2.35
HLA-DOBP13765 RNU2-59P-201ENST00000410482 191 ntBASIC0.4□□□□□ -2.35
HLA-DOBP13765 snoU13.11-201ENST00000459219 104 ntBASIC0.4□□□□□ -2.35
HLA-DOBP13765 RNU7-61P-201ENST00000515897 61 ntBASIC0.4□□□□□ -2.35
HLA-DOBP13765 AL162376.1-201ENST00000624117 175 ntBASIC0.4□□□□□ -2.35
HLA-DOBP13765 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
HLA-DOBP13765 SNORD116-10-201ENST00000363791 102 ntBASIC0.39□□□□□ -2.35
HLA-DOBP13765 SNORD58A-201ENST00000383875 65 ntBASIC0.39□□□□□ -2.35
HLA-DOBP13765 MIR1287-201ENST00000408492 90 ntBASIC0.39□□□□□ -2.35
HLA-DOBP13765 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
HLA-DOBP13765 MTATP8P2-201ENST00000435212 202 ntBASIC0.39□□□□□ -2.35
HLA-DOBP13765 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.39□□□□□ -2.35
HLA-DOBP13765 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
HLA-DOBP13765 AP001318.4-201ENST00000616637 121 ntBASIC0.39□□□□□ -2.35
HLA-DOBP13765 Y_RNA.81-201ENST00000362997 102 ntBASIC0.38□□□□□ -2.35
HLA-DOBP13765 AL161932.1-201ENST00000437408 146 ntBASIC0.38□□□□□ -2.35
HLA-DOBP13765 RNA5SP436-201ENST00000516020 115 ntBASIC0.38□□□□□ -2.35
HLA-DOBP13765 SNORA40.13-201ENST00000516379 120 ntBASIC0.38□□□□□ -2.35
HLA-DOBP13765 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.38□□□□□ -2.35
HLA-DOBP13765 AL078603.1-201ENST00000603824 313 ntBASIC0.38□□□□□ -2.35
HLA-DOBP13765 MTRNR2L2-201ENST00000604882 87 ntBASIC0.38□□□□□ -2.35
HLA-DOBP13765 U6.100-201ENST00000636230 99 ntBASIC0.38□□□□□ -2.35
HLA-DOBP13765 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
HLA-DOBP13765 SNORD44.1-201ENST00000363202 61 ntBASIC0.37□□□□□ -2.35
HLA-DOBP13765 Y_RNA.495-201ENST00000384435 112 ntBASIC0.37□□□□□ -2.35
HLA-DOBP13765 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.37□□□□□ -2.35
HLA-DOBP13765 AC069271.1-201ENST00000445577 156 ntBASIC0.37□□□□□ -2.35
HLA-DOBP13765 RNU6-848P-201ENST00000515948 107 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms