Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.62□□□□□ -2.51
SEMA3DO95025 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.63□□□□□ -2.51
SEMA3DO95025 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.63□□□□□ -2.51
SEMA3DO95025 MIR539-201ENST00000365690 78 ntBASIC-0.63□□□□□ -2.51
SEMA3DO95025 RNU6-154P-201ENST00000384306 106 ntBASIC-0.63□□□□□ -2.51
SEMA3DO95025 MT-TI-201ENST00000387365 69 ntBASIC-0.63□□□□□ -2.51
SEMA3DO95025 AL161932.1-201ENST00000437408 146 ntBASIC-0.63□□□□□ -2.51
SEMA3DO95025 RNU6-111P-201ENST00000517179 105 ntBASIC-0.63□□□□□ -2.51
SEMA3DO95025 AC022559.1-201ENST00000520905 205 ntBASIC-0.63□□□□□ -2.51
SEMA3DO95025 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.64□□□□□ -2.51
SEMA3DO95025 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
SEMA3DO95025 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.64□□□□□ -2.51
SEMA3DO95025 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.64□□□□□ -2.51
SEMA3DO95025 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.64□□□□□ -2.51
SEMA3DO95025 RNA5SP461-201ENST00000516451 104 ntBASIC-0.64□□□□□ -2.51
SEMA3DO95025 MIR409-201ENST00000362237 79 ntBASIC-0.65□□□□□ -2.51
SEMA3DO95025 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.65□□□□□ -2.51
SEMA3DO95025 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.65□□□□□ -2.51
SEMA3DO95025 RNU6-239P-201ENST00000390990 99 ntBASIC-0.65□□□□□ -2.51
SEMA3DO95025 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.65□□□□□ -2.51
SEMA3DO95025 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.65□□□□□ -2.51
SEMA3DO95025 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.65□□□□□ -2.51
SEMA3DO95025 TRDV1-202ENST00000621643 102 ntBASIC-0.65□□□□□ -2.51
SEMA3DO95025 AC021753.1-201ENST00000635724 168 ntBASIC-0.65□□□□□ -2.51
SEMA3DO95025 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 RNU6-455P-201ENST00000384681 107 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 RNY1P7-201ENST00000384743 110 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 MIR587-201ENST00000384845 96 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 MIR568-201ENST00000385036 95 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 MT-TY-201ENST00000387409 66 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 SCARNA17-201ENST00000516183 144 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 RNU7-121P-201ENST00000516604 62 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 MIR4432-201ENST00000581823 84 ntBASIC-0.66□□□□□ -2.52
SEMA3DO95025 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.67□□□□□ -2.52
SEMA3DO95025 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.67□□□□□ -2.52
SEMA3DO95025 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.67□□□□□ -2.52
SEMA3DO95025 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.67□□□□□ -2.52
SEMA3DO95025 SNORD38.2-201ENST00000384470 69 ntBASIC-0.67□□□□□ -2.52
SEMA3DO95025 U6.100-201ENST00000636230 99 ntBASIC-0.67□□□□□ -2.52
SEMA3DO95025 MIR1255B1-201ENST00000636325 63 ntBASIC-0.67□□□□□ -2.52
SEMA3DO95025 SNORD36A-201ENST00000362874 73 ntBASIC-0.68□□□□□ -2.52
SEMA3DO95025 SNORD115-19-201ENST00000363098 82 ntBASIC-0.68□□□□□ -2.52
SEMA3DO95025 SNORD115-18-201ENST00000363293 82 ntBASIC-0.68□□□□□ -2.52
SEMA3DO95025 SNORD115-17-201ENST00000364612 82 ntBASIC-0.68□□□□□ -2.52
SEMA3DO95025 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.68□□□□□ -2.52
SEMA3DO95025 RNU6-738P-201ENST00000384531 106 ntBASIC-0.68□□□□□ -2.52
SEMA3DO95025 RNU6-243P-201ENST00000391140 107 ntBASIC-0.68□□□□□ -2.52
SEMA3DO95025 SNX3P1X-201ENST00000414887 175 ntBASIC-0.68□□□□□ -2.52
SEMA3DO95025 SPINT5P-201ENST00000448174 155 ntBASIC-0.68□□□□□ -2.52
SEMA3DO95025 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.68□□□□□ -2.52
SEMA3DO95025 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.68□□□□□ -2.52
SEMA3DO95025 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.69□□□□□ -2.52
SEMA3DO95025 SNORA20.1-201ENST00000364790 130 ntBASIC-0.69□□□□□ -2.52
SEMA3DO95025 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.69□□□□□ -2.52
SEMA3DO95025 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.69□□□□□ -2.52
SEMA3DO95025 MTCYBP9-201ENST00000431021 303 ntBASIC-0.69□□□□□ -2.52
SEMA3DO95025 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.69□□□□□ -2.52
SEMA3DO95025 RNA5SP66-201ENST00000517178 101 ntBASIC-0.69□□□□□ -2.52
SEMA3DO95025 AC062037.2-201ENST00000610137 73 ntBASIC-0.69□□□□□ -2.52
SEMA3DO95025 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.69□□□□□ -2.52
SEMA3DO95025 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.69□□□□□ -2.52
SEMA3DO95025 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.69□□□□□ -2.52
SEMA3DO95025 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.69□□□□□ -2.52
SEMA3DO95025 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.69□□□□□ -2.52
SEMA3DO95025 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.7□□□□□ -2.52
SEMA3DO95025 MIR652-201ENST00000385278 98 ntBASIC-0.7□□□□□ -2.52
SEMA3DO95025 SNORA7.5-201ENST00000410672 110 ntBASIC-0.7□□□□□ -2.52
SEMA3DO95025 RNA5SP470-201ENST00000516463 106 ntBASIC-0.7□□□□□ -2.52
SEMA3DO95025 MIR3163-201ENST00000581592 73 ntBASIC-0.7□□□□□ -2.52
SEMA3DO95025 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.7□□□□□ -2.52
SEMA3DO95025 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.71□□□□□ -2.52
SEMA3DO95025 RNU6-957P-201ENST00000363652 99 ntBASIC-0.71□□□□□ -2.52
SEMA3DO95025 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.71□□□□□ -2.52
SEMA3DO95025 MIR9-2-201ENST00000384838 87 ntBASIC-0.71□□□□□ -2.52
SEMA3DO95025 MIR4320-201ENST00000636981 65 ntBASIC-0.71□□□□□ -2.52
SEMA3DO95025 MIR20A-201ENST00000362279 71 ntBASIC-0.72□□□□□ -2.52
SEMA3DO95025 SNORD114-14-201ENST00000362723 75 ntBASIC-0.72□□□□□ -2.52
SEMA3DO95025 SNORA63-201ENST00000363450 132 ntBASIC-0.72□□□□□ -2.52
SEMA3DO95025 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.72□□□□□ -2.52
SEMA3DO95025 AP000676.1-201ENST00000533307 52 ntBASIC-0.72□□□□□ -2.52
SEMA3DO95025 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.73□□□□□ -2.53
SEMA3DO95025 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.73□□□□□ -2.53
SEMA3DO95025 RNA5SP331-201ENST00000364986 107 ntBASIC-0.73□□□□□ -2.53
SEMA3DO95025 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.73□□□□□ -2.53
SEMA3DO95025 SNORD83B-201ENST00000386745 93 ntBASIC-0.73□□□□□ -2.53
SEMA3DO95025 SNORA3B-201ENST00000391305 131 ntBASIC-0.73□□□□□ -2.53
SEMA3DO95025 MIR1302-3-201ENST00000408128 138 ntBASIC-0.73□□□□□ -2.53
SEMA3DO95025 AL445193.1-201ENST00000441183 141 ntBASIC-0.73□□□□□ -2.53
SEMA3DO95025 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.73□□□□□ -2.53
SEMA3DO95025 MIR3115-201ENST00000577915 68 ntBASIC-0.73□□□□□ -2.53
SEMA3DO95025 MIR3121-201ENST00000579680 77 ntBASIC-0.73□□□□□ -2.53
SEMA3DO95025 AC141273.2-201ENST00000618989 130 ntBASIC-0.73□□□□□ -2.53
SEMA3DO95025 AL512310.12-203ENST00000640543 90 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 266.5 ms