Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MIR548U-201ENST00000390728 81 ntBASIC1.45□□□□□ -2.18
SRGAP3O43295 MIR938-201ENST00000401216 83 ntBASIC1.45□□□□□ -2.18
SRGAP3O43295 RNU6-977P-201ENST00000516411 103 ntBASIC1.45□□□□□ -2.18
SRGAP3O43295 SNORA18.5-201ENST00000516616 101 ntBASIC1.45□□□□□ -2.18
SRGAP3O43295 MIR3064-201ENST00000581130 66 ntBASIC1.45□□□□□ -2.18
SRGAP3O43295 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.45□□□□□ -2.18
SRGAP3O43295 RNU6-129P-201ENST00000391022 107 ntBASIC1.44□□□□□ -2.18
SRGAP3O43295 AL450471.1-201ENST00000447509 127 ntBASIC1.44□□□□□ -2.18
SRGAP3O43295 RNU7-102P-201ENST00000458948 62 ntBASIC1.44□□□□□ -2.18
SRGAP3O43295 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.44□□□□□ -2.18
SRGAP3O43295 RNU6-448P-201ENST00000517052 107 ntBASIC1.44□□□□□ -2.18
SRGAP3O43295 SNORA70.22-201ENST00000517160 124 ntBASIC1.44□□□□□ -2.18
SRGAP3O43295 TRDV1-202ENST00000621643 102 ntBASIC1.44□□□□□ -2.18
SRGAP3O43295 AC027335.2-201ENST00000624030 375 ntBASIC1.44□□□□□ -2.18
SRGAP3O43295 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SRGAP3O43295 SNORA25.9-201ENST00000365087 128 ntBASIC1.43□□□□□ -2.18
SRGAP3O43295 Y_RNA.491-201ENST00000384417 107 ntBASIC1.43□□□□□ -2.18
SRGAP3O43295 RNU6-535P-201ENST00000384722 107 ntBASIC1.43□□□□□ -2.18
SRGAP3O43295 MIR499A-201ENST00000384903 122 ntBASIC1.43□□□□□ -2.18
SRGAP3O43295 MIR150-201ENST00000385048 84 ntBASIC1.43□□□□□ -2.18
SRGAP3O43295 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SRGAP3O43295 AL606490.4-201ENST00000423117 127 ntBASIC1.43□□□□□ -2.18
SRGAP3O43295 AC019288.1-201ENST00000557918 224 ntBASIC1.43□□□□□ -2.18
SRGAP3O43295 RNU6-1260P-201ENST00000362944 107 ntBASIC1.42□□□□□ -2.18
SRGAP3O43295 MIR599-201ENST00000385069 95 ntBASIC1.42□□□□□ -2.18
SRGAP3O43295 MIR519A1-201ENST00000385257 85 ntBASIC1.42□□□□□ -2.18
SRGAP3O43295 MIR889-201ENST00000401280 79 ntBASIC1.42□□□□□ -2.18
SRGAP3O43295 AC097635.1-201ENST00000450678 155 ntBASIC1.42□□□□□ -2.18
SRGAP3O43295 AC067940.1-201ENST00000458411 300 ntBASIC1.42□□□□□ -2.18
SRGAP3O43295 AC138907.6-201ENST00000568401 126 ntBASIC1.42□□□□□ -2.18
SRGAP3O43295 AC138869.1-201ENST00000568623 124 ntBASIC1.42□□□□□ -2.18
SRGAP3O43295 MIR1-1-201ENST00000362147 71 ntBASIC1.41□□□□□ -2.18
SRGAP3O43295 RNU6-291P-201ENST00000384720 107 ntBASIC1.41□□□□□ -2.18
SRGAP3O43295 MIR520F-201ENST00000384824 87 ntBASIC1.41□□□□□ -2.18
SRGAP3O43295 RNU1-119P-201ENST00000391122 165 ntBASIC1.41□□□□□ -2.18
SRGAP3O43295 MIR4804-201ENST00000581683 73 ntBASIC1.41□□□□□ -2.18
SRGAP3O43295 AC008608.1-201ENST00000603910 127 ntBASIC1.41□□□□□ -2.18
SRGAP3O43295 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
SRGAP3O43295 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.41□□□□□ -2.18
SRGAP3O43295 RNU6-369P-201ENST00000362515 102 ntBASIC1.4□□□□□ -2.19
SRGAP3O43295 Y_RNA.118-201ENST00000363300 101 ntBASIC1.4□□□□□ -2.19
SRGAP3O43295 RNU6-478P-201ENST00000363904 110 ntBASIC1.4□□□□□ -2.19
SRGAP3O43295 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.4□□□□□ -2.19
SRGAP3O43295 RNU6-1108P-201ENST00000516308 104 ntBASIC1.4□□□□□ -2.19
SRGAP3O43295 MIR4662A-201ENST00000637499 67 ntBASIC1.4□□□□□ -2.19
SRGAP3O43295 RNU6-315P-201ENST00000362666 107 ntBASIC1.39□□□□□ -2.19
SRGAP3O43295 RNU6-161P-201ENST00000363051 106 ntBASIC1.39□□□□□ -2.19
SRGAP3O43295 RNU6-1296P-201ENST00000383879 107 ntBASIC1.39□□□□□ -2.19
SRGAP3O43295 MIR518E-201ENST00000385252 88 ntBASIC1.39□□□□□ -2.19
SRGAP3O43295 SNORA63.2-201ENST00000362603 126 ntBASIC1.38□□□□□ -2.19
SRGAP3O43295 RNU6-624P-201ENST00000363411 107 ntBASIC1.38□□□□□ -2.19
SRGAP3O43295 RNA5SP245-201ENST00000364239 121 ntBASIC1.38□□□□□ -2.19
SRGAP3O43295 RNU6-776P-201ENST00000364403 104 ntBASIC1.38□□□□□ -2.19
SRGAP3O43295 RNU6-1022P-201ENST00000365049 104 ntBASIC1.38□□□□□ -2.19
SRGAP3O43295 Y_RNA.355-201ENST00000365462 98 ntBASIC1.38□□□□□ -2.19
SRGAP3O43295 U6.100-201ENST00000636230 99 ntBASIC1.38□□□□□ -2.19
SRGAP3O43295 Y_RNA.239-201ENST00000364444 113 ntBASIC1.36□□□□□ -2.19
SRGAP3O43295 SNORD101-201ENST00000384027 73 ntBASIC1.36□□□□□ -2.19
SRGAP3O43295 SNORD12-201ENST00000391002 90 ntBASIC1.36□□□□□ -2.19
SRGAP3O43295 RNU7-56P-201ENST00000458744 62 ntBASIC1.36□□□□□ -2.19
SRGAP3O43295 FGF7P7-201ENST00000514120 227 ntBASIC1.36□□□□□ -2.19
SRGAP3O43295 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SRGAP3O43295 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
SRGAP3O43295 RNU6-1094P-201ENST00000362416 104 ntBASIC1.35□□□□□ -2.19
SRGAP3O43295 RNA5SP327-201ENST00000362494 101 ntBASIC1.35□□□□□ -2.19
SRGAP3O43295 Y_RNA.224-201ENST00000364308 111 ntBASIC1.35□□□□□ -2.19
SRGAP3O43295 SNORA25-201ENST00000384384 134 ntBASIC1.35□□□□□ -2.19
SRGAP3O43295 SNORD90-201ENST00000391145 111 ntBASIC1.35□□□□□ -2.19
SRGAP3O43295 MIR1827-201ENST00000408549 66 ntBASIC1.35□□□□□ -2.19
SRGAP3O43295 RNU6-380P-201ENST00000410207 107 ntBASIC1.35□□□□□ -2.19
SRGAP3O43295 AC002429.1-201ENST00000437672 148 ntBASIC1.35□□□□□ -2.19
SRGAP3O43295 MIR4295-201ENST00000585286 85 ntBASIC1.35□□□□□ -2.19
SRGAP3O43295 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.35□□□□□ -2.19
SRGAP3O43295 RNU6-664P-201ENST00000362381 107 ntBASIC1.34□□□□□ -2.19
SRGAP3O43295 RNU6-686P-201ENST00000364839 107 ntBASIC1.34□□□□□ -2.19
SRGAP3O43295 MIR1276-201ENST00000408707 83 ntBASIC1.34□□□□□ -2.19
SRGAP3O43295 RNU6-557P-201ENST00000516842 110 ntBASIC1.34□□□□□ -2.19
SRGAP3O43295 Y_RNA.32-201ENST00000362589 110 ntBASIC1.33□□□□□ -2.2
SRGAP3O43295 SNORD77.2-201ENST00000391045 68 ntBASIC1.33□□□□□ -2.2
SRGAP3O43295 MIR1285-1-201ENST00000408593 84 ntBASIC1.33□□□□□ -2.2
SRGAP3O43295 Y_RNA.596-201ENST00000410462 109 ntBASIC1.33□□□□□ -2.2
SRGAP3O43295 AC087343.1-201ENST00000477341 475 ntBASIC1.33□□□□□ -2.2
SRGAP3O43295 MIR4696-201ENST00000581431 70 ntBASIC1.33□□□□□ -2.2
SRGAP3O43295 RMST_2.1-201ENST00000617263 136 ntBASIC1.33□□□□□ -2.2
SRGAP3O43295 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SRGAP3O43295 MIRLET7A1-201ENST00000362295 80 ntBASIC1.32□□□□□ -2.2
SRGAP3O43295 RNU6-208P-201ENST00000362431 107 ntBASIC1.32□□□□□ -2.2
SRGAP3O43295 RNU5F-1-201ENST00000362507 117 ntBASIC1.32□□□□□ -2.2
SRGAP3O43295 MIR520H-201ENST00000385126 88 ntBASIC1.32□□□□□ -2.2
SRGAP3O43295 Y_RNA.660-201ENST00000516002 120 ntBASIC1.32□□□□□ -2.2
SRGAP3O43295 SNORA31.14-201ENST00000516728 116 ntBASIC1.32□□□□□ -2.2
SRGAP3O43295 SNORD114-21-201ENST00000606412 72 ntBASIC1.32□□□□□ -2.2
SRGAP3O43295 AC145423.2-201ENST00000610631 239 ntBASIC1.32□□□□□ -2.2
SRGAP3O43295 SNORD89-201ENST00000390981 114 ntBASIC1.31□□□□□ -2.2
SRGAP3O43295 AC244505.6-201ENST00000452829 130 ntBASIC1.31□□□□□ -2.2
SRGAP3O43295 RNU6-1265P-201ENST00000516342 103 ntBASIC1.31□□□□□ -2.2
SRGAP3O43295 RNU6-1051P-201ENST00000365471 102 ntBASIC1.3□□□□□ -2.2
SRGAP3O43295 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SRGAP3O43295 RNA5SP102-201ENST00000516865 106 ntBASIC1.3□□□□□ -2.2
SRGAP3O43295 U7.4-201ENST00000614961 63 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms