Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MIR501-201ENST00000390204 84 ntBASIC0.03□□□□□ -2.4
RTCAO00442 MIR892B-201ENST00000401279 77 ntBASIC0.03□□□□□ -2.4
RTCAO00442 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.03□□□□□ -2.4
RTCAO00442 RNU6-1232P-201ENST00000516299 86 ntBASIC0.03□□□□□ -2.4
RTCAO00442 RNU6-659P-201ENST00000516454 104 ntBASIC0.03□□□□□ -2.4
RTCAO00442 RNU6-971P-201ENST00000516920 106 ntBASIC0.03□□□□□ -2.4
RTCAO00442 U6.95-201ENST00000636931 70 ntBASIC0.03□□□□□ -2.4
RTCAO00442 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.03□□□□□ -2.4
RTCAO00442 MIR330-201ENST00000362196 94 ntBASIC0.02□□□□□ -2.41
RTCAO00442 Y_RNA.247-201ENST00000364500 92 ntBASIC0.02□□□□□ -2.41
RTCAO00442 MIR610-201ENST00000385139 96 ntBASIC0.02□□□□□ -2.41
RTCAO00442 RNU7-107P-201ENST00000459121 61 ntBASIC0.02□□□□□ -2.41
RTCAO00442 MIR4694-201ENST00000578534 80 ntBASIC0.02□□□□□ -2.41
RTCAO00442 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
RTCAO00442 AC104408.1-201ENST00000605241 170 ntBASIC0.02□□□□□ -2.41
RTCAO00442 MIR8087-201ENST00000612745 78 ntBASIC0.02□□□□□ -2.41
RTCAO00442 SNORD114-5-201ENST00000362928 70 ntBASIC0.01□□□□□ -2.41
RTCAO00442 MIR548H2-201ENST00000408874 88 ntBASIC0.01□□□□□ -2.41
RTCAO00442 SPINT5P-201ENST00000448174 155 ntBASIC0.01□□□□□ -2.41
RTCAO00442 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
RTCAO00442 AC007012.1-201ENST00000567192 175 ntBASIC0.01□□□□□ -2.41
RTCAO00442 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
RTCAO00442 MTRNR2L2-201ENST00000604882 87 ntBASIC0.01□□□□□ -2.41
RTCAO00442 Y_RNA.57-201ENST00000362806 113 ntBASIC0□□□□□ -2.41
RTCAO00442 RNU6-704P-201ENST00000364162 103 ntBASIC0□□□□□ -2.41
RTCAO00442 Y_RNA.218-201ENST00000364218 104 ntBASIC0□□□□□ -2.41
RTCAO00442 RNU6-652P-201ENST00000365488 107 ntBASIC0□□□□□ -2.41
RTCAO00442 Y_RNA.563-201ENST00000384707 108 ntBASIC0□□□□□ -2.41
RTCAO00442 MIR617-201ENST00000385030 97 ntBASIC0□□□□□ -2.41
RTCAO00442 RNU6-243P-201ENST00000391140 107 ntBASIC0□□□□□ -2.41
RTCAO00442 AC093423.1-201ENST00000440817 142 ntBASIC0□□□□□ -2.41
RTCAO00442 RNU7-129P-201ENST00000516128 62 ntBASIC0□□□□□ -2.41
RTCAO00442 RNA5SP480-201ENST00000516840 109 ntBASIC0□□□□□ -2.41
RTCAO00442 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
RTCAO00442 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.01□□□□□ -2.41
RTCAO00442 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.01□□□□□ -2.41
RTCAO00442 RNA5SP63-201ENST00000391225 112 ntBASIC-0.01□□□□□ -2.41
RTCAO00442 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.01□□□□□ -2.41
RTCAO00442 MIR3133-201ENST00000583157 78 ntBASIC-0.01□□□□□ -2.41
RTCAO00442 MIR4677-201ENST00000584153 80 ntBASIC-0.01□□□□□ -2.41
RTCAO00442 AC096720.1-201ENST00000604441 183 ntBASIC-0.01□□□□□ -2.41
RTCAO00442 AL035470.1-201ENST00000622571 220 ntBASIC-0.01□□□□□ -2.41
RTCAO00442 MIR499B-201ENST00000636498 73 ntBASIC-0.01□□□□□ -2.41
RTCAO00442 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
RTCAO00442 RNU1-141P-201ENST00000364623 158 ntBASIC-0.02□□□□□ -2.41
RTCAO00442 SNORD116-14-201ENST00000383894 92 ntBASIC-0.02□□□□□ -2.41
RTCAO00442 SNORD116-17-201ENST00000383929 92 ntBASIC-0.02□□□□□ -2.41
RTCAO00442 SNORD116-15-201ENST00000384445 92 ntBASIC-0.02□□□□□ -2.41
RTCAO00442 SNORD116-19-201ENST00000384729 92 ntBASIC-0.02□□□□□ -2.41
RTCAO00442 MIR577-201ENST00000385196 96 ntBASIC-0.02□□□□□ -2.41
RTCAO00442 MIR643-201ENST00000385267 97 ntBASIC-0.02□□□□□ -2.41
RTCAO00442 RNA5SP484-201ENST00000458857 111 ntBASIC-0.02□□□□□ -2.41
RTCAO00442 MIR548AG2-201ENST00000581228 64 ntBASIC-0.02□□□□□ -2.41
RTCAO00442 MIR7111-201ENST00000619751 72 ntBASIC-0.02□□□□□ -2.41
RTCAO00442 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.02□□□□□ -2.41
RTCAO00442 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.02□□□□□ -2.41
RTCAO00442 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.03□□□□□ -2.41
RTCAO00442 RNY3P2-201ENST00000362918 102 ntBASIC-0.03□□□□□ -2.41
RTCAO00442 MIR519E-201ENST00000385075 84 ntBASIC-0.03□□□□□ -2.41
RTCAO00442 MT-TR-201ENST00000387439 65 ntBASIC-0.03□□□□□ -2.41
RTCAO00442 SNORD110-201ENST00000408189 75 ntBASIC-0.03□□□□□ -2.41
RTCAO00442 AC006210.1-201ENST00000424882 111 ntBASIC-0.03□□□□□ -2.41
RTCAO00442 MIR4439-201ENST00000583746 80 ntBASIC-0.03□□□□□ -2.41
RTCAO00442 TRDV1-202ENST00000621643 102 ntBASIC-0.03□□□□□ -2.41
RTCAO00442 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.04□□□□□ -2.42
RTCAO00442 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.04□□□□□ -2.42
RTCAO00442 RNU6-480P-201ENST00000384332 107 ntBASIC-0.04□□□□□ -2.42
RTCAO00442 HMGN2P22-201ENST00000427588 175 ntBASIC-0.04□□□□□ -2.42
RTCAO00442 AC068339.1-201ENST00000526965 141 ntBASIC-0.04□□□□□ -2.42
RTCAO00442 NAMPTP3-201ENST00000569273 224 ntBASIC-0.04□□□□□ -2.42
RTCAO00442 AC069503.3-201ENST00000618674 145 ntBASIC-0.04□□□□□ -2.42
RTCAO00442 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.04□□□□□ -2.42
RTCAO00442 RNU6-832P-201ENST00000363319 107 ntBASIC-0.05□□□□□ -2.42
RTCAO00442 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.05□□□□□ -2.42
RTCAO00442 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.05□□□□□ -2.42
RTCAO00442 MIR145-201ENST00000384967 88 ntBASIC-0.05□□□□□ -2.42
RTCAO00442 MIR876-201ENST00000401147 81 ntBASIC-0.05□□□□□ -2.42
RTCAO00442 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.05□□□□□ -2.42
RTCAO00442 MIR2113-201ENST00000459007 91 ntBASIC-0.05□□□□□ -2.42
RTCAO00442 SNORD33.1-201ENST00000516213 88 ntBASIC-0.05□□□□□ -2.42
RTCAO00442 SNORA25.13-201ENST00000516395 103 ntBASIC-0.05□□□□□ -2.42
RTCAO00442 MIR5009-201ENST00000578736 100 ntBASIC-0.05□□□□□ -2.42
RTCAO00442 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.06□□□□□ -2.42
RTCAO00442 SNORA75.1-201ENST00000391130 148 ntBASIC-0.06□□□□□ -2.42
RTCAO00442 RNU7-165P-201ENST00000458864 60 ntBASIC-0.06□□□□□ -2.42
RTCAO00442 MIR3925-201ENST00000584674 77 ntBASIC-0.06□□□□□ -2.42
RTCAO00442 AL670379.3-201ENST00000605040 251 ntBASIC-0.06□□□□□ -2.42
RTCAO00442 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.07□□□□□ -2.42
RTCAO00442 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.07□□□□□ -2.42
RTCAO00442 U8.6-201ENST00000364939 135 ntBASIC-0.07□□□□□ -2.42
RTCAO00442 RNU6-81P-201ENST00000365608 104 ntBASIC-0.07□□□□□ -2.42
RTCAO00442 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.07□□□□□ -2.42
RTCAO00442 MIR548A3-201ENST00000385297 97 ntBASIC-0.07□□□□□ -2.42
RTCAO00442 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
RTCAO00442 MIR1197-201ENST00000408818 88 ntBASIC-0.07□□□□□ -2.42
RTCAO00442 RNU6-287P-201ENST00000516230 98 ntBASIC-0.07□□□□□ -2.42
RTCAO00442 RNU6-180P-201ENST00000516697 61 ntBASIC-0.07□□□□□ -2.42
RTCAO00442 MIR1295B-201ENST00000636144 60 ntBASIC-0.07□□□□□ -2.42
RTCAO00442 U6.100-201ENST00000636230 99 ntBASIC-0.07□□□□□ -2.42
RTCAO00442 RNA5SP325-201ENST00000363756 130 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms