Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 AC008608.1-201ENST00000603910 127 ntBASIC1.6□□□□□ -2.15
U3KQE9 U6.81-201ENST00000612550 106 ntBASIC1.6□□□□□ -2.15
U3KQE9 AC027335.2-201ENST00000624030 375 ntBASIC1.6□□□□□ -2.15
U3KQE9 RNU6-154P-201ENST00000384306 106 ntBASIC1.59□□□□□ -2.15
U3KQE9 RNU6-649P-201ENST00000384463 107 ntBASIC1.59□□□□□ -2.15
U3KQE9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
U3KQE9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.59□□□□□ -2.15
U3KQE9 snoU13.17-201ENST00000458802 104 ntBASIC1.59□□□□□ -2.15
U3KQE9 RNU7-90P-201ENST00000459216 62 ntBASIC1.59□□□□□ -2.15
U3KQE9 RNU7-40P-201ENST00000516397 64 ntBASIC1.59□□□□□ -2.15
U3KQE9 RNU6-1057P-201ENST00000517162 102 ntBASIC1.59□□□□□ -2.15
U3KQE9 RNU6-902P-201ENST00000517212 91 ntBASIC1.59□□□□□ -2.15
U3KQE9 RNU6-1241P-201ENST00000384536 107 ntBASIC1.58□□□□□ -2.16
U3KQE9 MIR154-201ENST00000385243 84 ntBASIC1.58□□□□□ -2.16
U3KQE9 MIR216B-201ENST00000390186 82 ntBASIC1.58□□□□□ -2.16
U3KQE9 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
U3KQE9 SNORD12-201ENST00000391002 90 ntBASIC1.58□□□□□ -2.16
U3KQE9 MIR934-201ENST00000401241 83 ntBASIC1.58□□□□□ -2.16
U3KQE9 RNU1-40P-201ENST00000516816 164 ntBASIC1.58□□□□□ -2.16
U3KQE9 RNU1-97P-201ENST00000516872 164 ntBASIC1.58□□□□□ -2.16
U3KQE9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.58□□□□□ -2.16
U3KQE9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.58□□□□□ -2.16
U3KQE9 AP000553.5-201ENST00000641933 54 ntBASIC1.58□□□□□ -2.16
U3KQE9 Y_RNA.174-201ENST00000363781 105 ntBASIC1.57□□□□□ -2.16
U3KQE9 RNA5SP160-201ENST00000364866 120 ntBASIC1.57□□□□□ -2.16
U3KQE9 MIR451A-201ENST00000385059 72 ntBASIC1.57□□□□□ -2.16
U3KQE9 RNU6-994P-201ENST00000410507 111 ntBASIC1.57□□□□□ -2.16
U3KQE9 HMGN2P38-201ENST00000423806 265 ntBASIC1.57□□□□□ -2.16
U3KQE9 HMGN2P19-201ENST00000425149 265 ntBASIC1.57□□□□□ -2.16
U3KQE9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.57□□□□□ -2.16
U3KQE9 RNU6-717P-201ENST00000459076 104 ntBASIC1.57□□□□□ -2.16
U3KQE9 RNU6-752P-201ENST00000516376 102 ntBASIC1.57□□□□□ -2.16
U3KQE9 MIR1273D-201ENST00000577266 86 ntBASIC1.57□□□□□ -2.16
U3KQE9 MIR6873-201ENST00000622788 63 ntBASIC1.57□□□□□ -2.16
U3KQE9 ZNF355P-201ENST00000427301 3216 ntBASIC1.56□□□□□ -2.16
U3KQE9 MIR634-201ENST00000385208 97 ntBASIC1.56□□□□□ -2.16
U3KQE9 RNU7-102P-201ENST00000458948 62 ntBASIC1.56□□□□□ -2.16
U3KQE9 RPL23AP42-201ENST00000471152 471 ntBASIC1.56□□□□□ -2.16
U3KQE9 MIR4804-201ENST00000581683 73 ntBASIC1.56□□□□□ -2.16
U3KQE9 MIR8053-201ENST00000613344 75 ntBASIC1.56□□□□□ -2.16
U3KQE9 MIR219B-201ENST00000637023 88 ntBASIC1.56□□□□□ -2.16
U3KQE9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
U3KQE9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.55□□□□□ -2.16
U3KQE9 Y_RNA.371-201ENST00000365591 113 ntBASIC1.55□□□□□ -2.16
U3KQE9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
U3KQE9 RNU1-119P-201ENST00000391122 165 ntBASIC1.55□□□□□ -2.16
U3KQE9 MIR5089-201ENST00000580047 84 ntBASIC1.55□□□□□ -2.16
U3KQE9 MIR3675-201ENST00000583661 73 ntBASIC1.55□□□□□ -2.16
U3KQE9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.55□□□□□ -2.16
U3KQE9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
U3KQE9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
U3KQE9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
U3KQE9 MIR449A-201ENST00000362113 91 ntBASIC1.54□□□□□ -2.16
U3KQE9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.54□□□□□ -2.16
U3KQE9 RNA5SP338-201ENST00000410495 85 ntBASIC1.54□□□□□ -2.16
U3KQE9 RNA5SP489-201ENST00000410986 109 ntBASIC1.54□□□□□ -2.16
U3KQE9 AC067940.1-201ENST00000458411 300 ntBASIC1.54□□□□□ -2.16
U3KQE9 SNORD79.1-201ENST00000516069 84 ntBASIC1.54□□□□□ -2.16
U3KQE9 MIR3140-201ENST00000583685 90 ntBASIC1.54□□□□□ -2.16
U3KQE9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
U3KQE9 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.54□□□□□ -2.16
U3KQE9 MIR6852-201ENST00000621699 66 ntBASIC1.54□□□□□ -2.16
U3KQE9 RNU6-369P-201ENST00000362515 102 ntBASIC1.53□□□□□ -2.16
U3KQE9 Y_RNA.340-201ENST00000365330 92 ntBASIC1.53□□□□□ -2.16
U3KQE9 RNU6-540P-201ENST00000384622 101 ntBASIC1.53□□□□□ -2.16
U3KQE9 SNORA64-201ENST00000384674 134 ntBASIC1.53□□□□□ -2.16
U3KQE9 SNORD30.1-201ENST00000391309 70 ntBASIC1.53□□□□□ -2.16
U3KQE9 SNORA3.2-201ENST00000408221 125 ntBASIC1.53□□□□□ -2.16
U3KQE9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.53□□□□□ -2.16
U3KQE9 RNA5SP425-201ENST00000410336 112 ntBASIC1.53□□□□□ -2.16
U3KQE9 RN7SKP223-201ENST00000410582 62 ntBASIC1.53□□□□□ -2.16
U3KQE9 RNU7-56P-201ENST00000458744 62 ntBASIC1.53□□□□□ -2.16
U3KQE9 RNU6-977P-201ENST00000516411 103 ntBASIC1.53□□□□□ -2.16
U3KQE9 RNU6-135P-201ENST00000516769 101 ntBASIC1.53□□□□□ -2.16
U3KQE9 RNA5SP364-201ENST00000516938 78 ntBASIC1.53□□□□□ -2.16
U3KQE9 AC023827.1-201ENST00000569247 97 ntBASIC1.53□□□□□ -2.16
U3KQE9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
U3KQE9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
U3KQE9 U6.111-201ENST00000636093 83 ntBASIC1.53□□□□□ -2.16
U3KQE9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
U3KQE9 MIR1-1-201ENST00000362147 71 ntBASIC1.52□□□□□ -2.17
U3KQE9 RNU6-910P-201ENST00000390844 107 ntBASIC1.52□□□□□ -2.17
U3KQE9 RNU6-1177P-201ENST00000391058 104 ntBASIC1.52□□□□□ -2.17
U3KQE9 AC008413.1-201ENST00000511864 177 ntBASIC1.52□□□□□ -2.17
U3KQE9 RNU1-41P-201ENST00000516161 162 ntBASIC1.52□□□□□ -2.17
U3KQE9 RNU1-48P-201ENST00000516400 162 ntBASIC1.52□□□□□ -2.17
U3KQE9 RNU7-13P-201ENST00000516413 62 ntBASIC1.52□□□□□ -2.17
U3KQE9 MIR664A-201ENST00000626086 82 ntBASIC1.52□□□□□ -2.17
U3KQE9 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.52□□□□□ -2.17
U3KQE9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.51□□□□□ -2.17
U3KQE9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
U3KQE9 RNA5SP245-201ENST00000364239 121 ntBASIC1.51□□□□□ -2.17
U3KQE9 Y_RNA.386-201ENST00000383913 105 ntBASIC1.51□□□□□ -2.17
U3KQE9 RNU6-663P-201ENST00000391105 106 ntBASIC1.51□□□□□ -2.17
U3KQE9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
U3KQE9 AC079804.2-201ENST00000490376 200 ntBASIC1.51□□□□□ -2.17
U3KQE9 MIR4448-201ENST00000584360 86 ntBASIC1.51□□□□□ -2.17
U3KQE9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.51□□□□□ -2.17
U3KQE9 Y_RNA.783-201ENST00000613546 102 ntBASIC1.51□□□□□ -2.17
U3KQE9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms