Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MIR3163-201ENST00000581592 73 ntBASIC-0.05□□□□□ -2.42
ATG4BQ9Y4P1 AC087741.2-201ENST00000619415 172 ntBASIC-0.05□□□□□ -2.42
ATG4BQ9Y4P1 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.06□□□□□ -2.42
ATG4BQ9Y4P1 RNU6-804P-201ENST00000384286 107 ntBASIC-0.06□□□□□ -2.42
ATG4BQ9Y4P1 MIR34C-201ENST00000384831 77 ntBASIC-0.06□□□□□ -2.42
ATG4BQ9Y4P1 MIR145-201ENST00000384967 88 ntBASIC-0.06□□□□□ -2.42
ATG4BQ9Y4P1 MT-TI-201ENST00000387365 69 ntBASIC-0.06□□□□□ -2.42
ATG4BQ9Y4P1 MIR759-201ENST00000390224 91 ntBASIC-0.06□□□□□ -2.42
ATG4BQ9Y4P1 MIR892B-201ENST00000401279 77 ntBASIC-0.06□□□□□ -2.42
ATG4BQ9Y4P1 MIR1263-201ENST00000408324 86 ntBASIC-0.06□□□□□ -2.42
ATG4BQ9Y4P1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.06□□□□□ -2.42
ATG4BQ9Y4P1 RNU6-170P-201ENST00000362832 104 ntBASIC-0.07□□□□□ -2.42
ATG4BQ9Y4P1 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.07□□□□□ -2.42
ATG4BQ9Y4P1 MIR501-201ENST00000390204 84 ntBASIC-0.07□□□□□ -2.42
ATG4BQ9Y4P1 SNORD41.1-201ENST00000391000 69 ntBASIC-0.07□□□□□ -2.42
ATG4BQ9Y4P1 RN7SKP19-201ENST00000516016 252 ntBASIC-0.07□□□□□ -2.42
ATG4BQ9Y4P1 RNU6-521P-201ENST00000516663 105 ntBASIC-0.07□□□□□ -2.42
ATG4BQ9Y4P1 RNU6-182P-201ENST00000516970 105 ntBASIC-0.07□□□□□ -2.42
ATG4BQ9Y4P1 MIR5706-201ENST00000579841 80 ntBASIC-0.07□□□□□ -2.42
ATG4BQ9Y4P1 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.07□□□□□ -2.42
ATG4BQ9Y4P1 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.08□□□□□ -2.42
ATG4BQ9Y4P1 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.08□□□□□ -2.42
ATG4BQ9Y4P1 RNU6-647P-201ENST00000364243 107 ntBASIC-0.08□□□□□ -2.42
ATG4BQ9Y4P1 RNU6-652P-201ENST00000365488 107 ntBASIC-0.08□□□□□ -2.42
ATG4BQ9Y4P1 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.08□□□□□ -2.42
ATG4BQ9Y4P1 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
ATG4BQ9Y4P1 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.08□□□□□ -2.42
ATG4BQ9Y4P1 RNU6-394P-201ENST00000410735 107 ntBASIC-0.08□□□□□ -2.42
ATG4BQ9Y4P1 MIR548X2-201ENST00000579776 100 ntBASIC-0.08□□□□□ -2.42
ATG4BQ9Y4P1 U7.6-201ENST00000610841 64 ntBASIC-0.08□□□□□ -2.42
ATG4BQ9Y4P1 AC073869.9-201ENST00000641610 120 ntBASIC-0.08□□□□□ -2.42
ATG4BQ9Y4P1 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.09□□□□□ -2.42
ATG4BQ9Y4P1 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.09□□□□□ -2.42
ATG4BQ9Y4P1 RNU6-571P-201ENST00000384128 107 ntBASIC-0.09□□□□□ -2.42
ATG4BQ9Y4P1 RNU6-524P-201ENST00000384270 107 ntBASIC-0.09□□□□□ -2.42
ATG4BQ9Y4P1 MIR548H2-201ENST00000408874 88 ntBASIC-0.09□□□□□ -2.42
ATG4BQ9Y4P1 RNU7-13P-201ENST00000516413 62 ntBASIC-0.09□□□□□ -2.42
ATG4BQ9Y4P1 RNA5SP395-201ENST00000516567 118 ntBASIC-0.09□□□□□ -2.42
ATG4BQ9Y4P1 RNU6-782P-201ENST00000516852 104 ntBASIC-0.09□□□□□ -2.42
ATG4BQ9Y4P1 RNU6-850P-201ENST00000516934 103 ntBASIC-0.09□□□□□ -2.42
ATG4BQ9Y4P1 SNORD115-19-201ENST00000363098 82 ntBASIC-0.1□□□□□ -2.43
ATG4BQ9Y4P1 SNORD115-18-201ENST00000363293 82 ntBASIC-0.1□□□□□ -2.43
ATG4BQ9Y4P1 SNORD115-17-201ENST00000364612 82 ntBASIC-0.1□□□□□ -2.43
ATG4BQ9Y4P1 RNU6-756P-201ENST00000383997 107 ntBASIC-0.1□□□□□ -2.43
ATG4BQ9Y4P1 SNORD38.2-201ENST00000384470 69 ntBASIC-0.1□□□□□ -2.43
ATG4BQ9Y4P1 snosnR66.1-201ENST00000391095 99 ntBASIC-0.1□□□□□ -2.43
ATG4BQ9Y4P1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.1□□□□□ -2.43
ATG4BQ9Y4P1 AC006210.1-201ENST00000424882 111 ntBASIC-0.1□□□□□ -2.43
ATG4BQ9Y4P1 MTND5P40-201ENST00000559945 246 ntBASIC-0.1□□□□□ -2.43
ATG4BQ9Y4P1 NAMPTP3-201ENST00000569273 224 ntBASIC-0.1□□□□□ -2.43
ATG4BQ9Y4P1 MIR3144-201ENST00000579460 79 ntBASIC-0.1□□□□□ -2.43
ATG4BQ9Y4P1 MIR1255B1-201ENST00000636325 63 ntBASIC-0.1□□□□□ -2.43
ATG4BQ9Y4P1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.1□□□□□ -2.43
ATG4BQ9Y4P1 MIR6759-201ENST00000638110 65 ntBASIC-0.1□□□□□ -2.43
ATG4BQ9Y4P1 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.11□□□□□ -2.43
ATG4BQ9Y4P1 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.11□□□□□ -2.43
ATG4BQ9Y4P1 RNU6-35P-201ENST00000384530 107 ntBASIC-0.11□□□□□ -2.43
ATG4BQ9Y4P1 MIR519A1-201ENST00000385257 85 ntBASIC-0.11□□□□□ -2.43
ATG4BQ9Y4P1 SNORD110-201ENST00000408189 75 ntBASIC-0.11□□□□□ -2.43
ATG4BQ9Y4P1 RNU7-106P-201ENST00000459514 67 ntBASIC-0.11□□□□□ -2.43
ATG4BQ9Y4P1 RNU6-509P-201ENST00000363519 107 ntBASIC-0.12□□□□□ -2.43
ATG4BQ9Y4P1 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.12□□□□□ -2.43
ATG4BQ9Y4P1 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.12□□□□□ -2.43
ATG4BQ9Y4P1 SNORA32.1-201ENST00000364514 115 ntBASIC-0.12□□□□□ -2.43
ATG4BQ9Y4P1 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.12□□□□□ -2.43
ATG4BQ9Y4P1 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.12□□□□□ -2.43
ATG4BQ9Y4P1 SNORA7.5-201ENST00000410672 110 ntBASIC-0.12□□□□□ -2.43
ATG4BQ9Y4P1 RNA5SP484-201ENST00000458857 111 ntBASIC-0.12□□□□□ -2.43
ATG4BQ9Y4P1 MIR548AD-201ENST00000584780 82 ntBASIC-0.12□□□□□ -2.43
ATG4BQ9Y4P1 uc_338.28-201ENST00000612082 187 ntBASIC-0.12□□□□□ -2.43
ATG4BQ9Y4P1 AP001340.1-201ENST00000624405 217 ntBASIC-0.12□□□□□ -2.43
ATG4BQ9Y4P1 MIR1295B-201ENST00000636144 60 ntBASIC-0.12□□□□□ -2.43
ATG4BQ9Y4P1 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 SNORD114-31-201ENST00000363219 75 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 RNU6-929P-201ENST00000384429 107 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 MIR516A2-201ENST00000384888 90 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 MIR516A1-201ENST00000385033 90 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 RNA5SP163-201ENST00000410304 99 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 RNU6-735P-201ENST00000410612 107 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 RNA5SP136-201ENST00000410906 107 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 RNA5SP272-201ENST00000516095 111 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 MIR3920-201ENST00000581751 86 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 MIR4677-201ENST00000584153 80 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 AL512310.12-203ENST00000640543 90 ntBASIC-0.13□□□□□ -2.43
ATG4BQ9Y4P1 RNU7-159P-201ENST00000459284 62 ntBASIC-0.14□□□□□ -2.43
ATG4BQ9Y4P1 AC104692.1-201ENST00000472406 90 ntBASIC-0.14□□□□□ -2.43
ATG4BQ9Y4P1 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.14□□□□□ -2.43
ATG4BQ9Y4P1 U7.2-201ENST00000607576 63 ntBASIC-0.14□□□□□ -2.43
ATG4BQ9Y4P1 MIR548D2-201ENST00000384955 97 ntBASIC-0.15□□□□□ -2.43
ATG4BQ9Y4P1 AL158147.1-201ENST00000443970 75 ntBASIC-0.15□□□□□ -2.43
ATG4BQ9Y4P1 SPINT5P-201ENST00000448174 155 ntBASIC-0.15□□□□□ -2.43
ATG4BQ9Y4P1 RNU6-781P-201ENST00000516377 101 ntBASIC-0.15□□□□□ -2.43
ATG4BQ9Y4P1 MTND5P41-201ENST00000517498 206 ntBASIC-0.15□□□□□ -2.43
ATG4BQ9Y4P1 IGLVI-20-201ENST00000519296 130 ntBASIC-0.15□□□□□ -2.43
ATG4BQ9Y4P1 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.16□□□□□ -2.44
ATG4BQ9Y4P1 MIR569-201ENST00000385228 96 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 226 ms