Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 MIR8074-201ENST00000615081 81 ntBASIC2.88□□□□□ -1.95
PHF8Q9UPP1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
PHF8Q9UPP1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
PHF8Q9UPP1 RNU6-669P-201ENST00000365575 107 ntBASIC2.87□□□□□ -1.95
PHF8Q9UPP1 SNORD116-24-201ENST00000384549 92 ntBASIC2.87□□□□□ -1.95
PHF8Q9UPP1 RNU6-1177P-201ENST00000391058 104 ntBASIC2.87□□□□□ -1.95
PHF8Q9UPP1 RNU6-1052P-201ENST00000411398 104 ntBASIC2.87□□□□□ -1.95
PHF8Q9UPP1 RNU6-274P-201ENST00000459566 107 ntBASIC2.87□□□□□ -1.95
PHF8Q9UPP1 SNORA31.11-201ENST00000516528 139 ntBASIC2.87□□□□□ -1.95
PHF8Q9UPP1 RNU6-719P-201ENST00000516671 104 ntBASIC2.87□□□□□ -1.95
PHF8Q9UPP1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.86□□□□□ -1.95
PHF8Q9UPP1 MIR583-201ENST00000384846 75 ntBASIC2.86□□□□□ -1.95
PHF8Q9UPP1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.86□□□□□ -1.95
PHF8Q9UPP1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.86□□□□□ -1.95
PHF8Q9UPP1 MIR4498-201ENST00000577599 66 ntBASIC2.86□□□□□ -1.95
PHF8Q9UPP1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.86□□□□□ -1.95
PHF8Q9UPP1 RNA5SP276-201ENST00000362580 94 ntBASIC2.85□□□□□ -1.95
PHF8Q9UPP1 RNU6-604P-201ENST00000390917 100 ntBASIC2.85□□□□□ -1.95
PHF8Q9UPP1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.85□□□□□ -1.95
PHF8Q9UPP1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PHF8Q9UPP1 MIR125B2-201ENST00000385128 89 ntBASIC2.84□□□□□ -1.95
PHF8Q9UPP1 RNU6-141P-201ENST00000410499 105 ntBASIC2.84□□□□□ -1.95
PHF8Q9UPP1 MIR3664-201ENST00000579074 99 ntBASIC2.84□□□□□ -1.95
PHF8Q9UPP1 AC245884.12-201ENST00000615364 59 ntBASIC2.84□□□□□ -1.95
PHF8Q9UPP1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
PHF8Q9UPP1 RNU6-934P-201ENST00000365154 107 ntBASIC2.83□□□□□ -1.96
PHF8Q9UPP1 AL773524.1-201ENST00000614065 229 ntBASIC2.83□□□□□ -1.96
PHF8Q9UPP1 AC069503.3-201ENST00000618674 145 ntBASIC2.83□□□□□ -1.96
PHF8Q9UPP1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PHF8Q9UPP1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PHF8Q9UPP1 SNORA17.3-201ENST00000391159 129 ntBASIC2.82□□□□□ -1.96
PHF8Q9UPP1 SNORD23.1-201ENST00000408212 104 ntBASIC2.82□□□□□ -1.96
PHF8Q9UPP1 SNORD83.1-201ENST00000411362 77 ntBASIC2.82□□□□□ -1.96
PHF8Q9UPP1 AC110620.1-201ENST00000416042 228 ntBASIC2.82□□□□□ -1.96
PHF8Q9UPP1 AC108667.1-201ENST00000428618 249 ntBASIC2.82□□□□□ -1.96
PHF8Q9UPP1 RNA5SP182-201ENST00000516064 82 ntBASIC2.82□□□□□ -1.96
PHF8Q9UPP1 MIR4773-1-201ENST00000637203 78 ntBASIC2.82□□□□□ -1.96
PHF8Q9UPP1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
PHF8Q9UPP1 SNORD113.3-201ENST00000364630 78 ntBASIC2.81□□□□□ -1.96
PHF8Q9UPP1 SNORD115-44-201ENST00000365391 82 ntBASIC2.81□□□□□ -1.96
PHF8Q9UPP1 snoU13.21-201ENST00000459368 105 ntBASIC2.81□□□□□ -1.96
PHF8Q9UPP1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.81□□□□□ -1.96
PHF8Q9UPP1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.81□□□□□ -1.96
PHF8Q9UPP1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
PHF8Q9UPP1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PHF8Q9UPP1 MIR4713-201ENST00000582691 75 ntBASIC2.8□□□□□ -1.96
PHF8Q9UPP1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PHF8Q9UPP1 Y_RNA.226-201ENST00000364337 114 ntBASIC2.79□□□□□ -1.96
PHF8Q9UPP1 RNU6-1053P-201ENST00000515930 101 ntBASIC2.79□□□□□ -1.96
PHF8Q9UPP1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.79□□□□□ -1.96
PHF8Q9UPP1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.79□□□□□ -1.96
PHF8Q9UPP1 MIR6895-201ENST00000613497 78 ntBASIC2.79□□□□□ -1.96
PHF8Q9UPP1 MIR8063-201ENST00000621930 81 ntBASIC2.79□□□□□ -1.96
PHF8Q9UPP1 SNORD33-201ENST00000362761 85 ntBASIC2.78□□□□□ -1.96
PHF8Q9UPP1 RNU6-535P-201ENST00000384722 107 ntBASIC2.78□□□□□ -1.96
PHF8Q9UPP1 AC244098.3-201ENST00000424803 96 ntBASIC2.78□□□□□ -1.96
PHF8Q9UPP1 AL645939.4-201ENST00000604495 135 ntBASIC2.78□□□□□ -1.96
PHF8Q9UPP1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
PHF8Q9UPP1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.97
PHF8Q9UPP1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
PHF8Q9UPP1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
PHF8Q9UPP1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PHF8Q9UPP1 RNU6-382P-201ENST00000365181 106 ntBASIC2.77□□□□□ -1.97
PHF8Q9UPP1 AC244505.6-201ENST00000452829 130 ntBASIC2.77□□□□□ -1.97
PHF8Q9UPP1 MIR4771-2-201ENST00000577758 74 ntBASIC2.77□□□□□ -1.97
PHF8Q9UPP1 MIR5694-201ENST00000581190 76 ntBASIC2.77□□□□□ -1.97
PHF8Q9UPP1 MIR4771-1-201ENST00000582617 74 ntBASIC2.77□□□□□ -1.97
PHF8Q9UPP1 DEFA7P-201ENST00000382676 285 ntBASIC2.76□□□□□ -1.97
PHF8Q9UPP1 RNU6-287P-201ENST00000516230 98 ntBASIC2.76□□□□□ -1.97
PHF8Q9UPP1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PHF8Q9UPP1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PHF8Q9UPP1 RNU6-1065P-201ENST00000384513 106 ntBASIC2.75□□□□□ -1.97
PHF8Q9UPP1 SNORA40.6-201ENST00000391153 128 ntBASIC2.75□□□□□ -1.97
PHF8Q9UPP1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
PHF8Q9UPP1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
PHF8Q9UPP1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.74□□□□□ -1.97
PHF8Q9UPP1 MIR302D-201ENST00000362275 68 ntBASIC2.74□□□□□ -1.97
PHF8Q9UPP1 RNU6-614P-201ENST00000384369 107 ntBASIC2.74□□□□□ -1.97
PHF8Q9UPP1 MIR216B-201ENST00000390186 82 ntBASIC2.74□□□□□ -1.97
PHF8Q9UPP1 snoU13.9-201ENST00000458927 103 ntBASIC2.74□□□□□ -1.97
PHF8Q9UPP1 AC036111.3-201ENST00000526389 112 ntBASIC2.74□□□□□ -1.97
PHF8Q9UPP1 AC008608.1-201ENST00000603910 127 ntBASIC2.74□□□□□ -1.97
PHF8Q9UPP1 U6.59-201ENST00000615686 107 ntBASIC2.74□□□□□ -1.97
PHF8Q9UPP1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.74□□□□□ -1.97
PHF8Q9UPP1 MIR6073-201ENST00000352083 89 ntBASIC2.73□□□□□ -1.97
PHF8Q9UPP1 AC079140.2-201ENST00000506193 142 ntBASIC2.73□□□□□ -1.97
PHF8Q9UPP1 RNA5SP402-201ENST00000517148 110 ntBASIC2.73□□□□□ -1.97
PHF8Q9UPP1 MIR5002-201ENST00000584713 97 ntBASIC2.73□□□□□ -1.97
PHF8Q9UPP1 MIR4781-201ENST00000585250 76 ntBASIC2.73□□□□□ -1.97
PHF8Q9UPP1 AL078603.1-201ENST00000603824 313 ntBASIC2.73□□□□□ -1.97
PHF8Q9UPP1 MIR6840-201ENST00000611937 71 ntBASIC2.73□□□□□ -1.97
PHF8Q9UPP1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PHF8Q9UPP1 RNA5SP245-201ENST00000364239 121 ntBASIC2.72□□□□□ -1.97
PHF8Q9UPP1 Y_RNA.258-201ENST00000364613 105 ntBASIC2.72□□□□□ -1.97
PHF8Q9UPP1 RNU6-364P-201ENST00000384387 107 ntBASIC2.72□□□□□ -1.97
PHF8Q9UPP1 MIR144-201ENST00000384886 86 ntBASIC2.72□□□□□ -1.97
PHF8Q9UPP1 SNORD111-201ENST00000408139 94 ntBASIC2.72□□□□□ -1.97
PHF8Q9UPP1 RPS26P5-201ENST00000418544 335 ntBASIC2.72□□□□□ -1.97
PHF8Q9UPP1 AL691482.2-201ENST00000457453 84 ntBASIC2.72□□□□□ -1.97
PHF8Q9UPP1 snoU13.31-201ENST00000607291 104 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms