Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 TRMT112P2-201ENST00000512910 132 ntBASIC1.29□□□□□ -2.2
PPARGC1AQ9UBK2 Y_RNA.697-201ENST00000516776 113 ntBASIC1.29□□□□□ -2.2
PPARGC1AQ9UBK2 RNU6-321P-201ENST00000410912 106 ntBASIC1.28□□□□□ -2.2
PPARGC1AQ9UBK2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.28□□□□□ -2.2
PPARGC1AQ9UBK2 RMST_2.1-201ENST00000617263 136 ntBASIC1.28□□□□□ -2.2
PPARGC1AQ9UBK2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
PPARGC1AQ9UBK2 SNORD116-22-201ENST00000384430 92 ntBASIC1.27□□□□□ -2.21
PPARGC1AQ9UBK2 Y_RNA.536-201ENST00000384621 113 ntBASIC1.27□□□□□ -2.21
PPARGC1AQ9UBK2 MIR520F-201ENST00000384824 87 ntBASIC1.27□□□□□ -2.21
PPARGC1AQ9UBK2 Y_RNA.648-201ENST00000459455 110 ntBASIC1.27□□□□□ -2.21
PPARGC1AQ9UBK2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.27□□□□□ -2.21
PPARGC1AQ9UBK2 RNA5SP404-201ENST00000517118 132 ntBASIC1.27□□□□□ -2.21
PPARGC1AQ9UBK2 AL157834.3-201ENST00000615543 103 ntBASIC1.27□□□□□ -2.21
PPARGC1AQ9UBK2 AC025521.1-201ENST00000621624 286 ntBASIC1.27□□□□□ -2.21
PPARGC1AQ9UBK2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.27□□□□□ -2.21
PPARGC1AQ9UBK2 RNU6-243P-201ENST00000391140 107 ntBASIC1.26□□□□□ -2.21
PPARGC1AQ9UBK2 SNORD63B-201ENST00000411005 70 ntBASIC1.26□□□□□ -2.21
PPARGC1AQ9UBK2 RNU6-448P-201ENST00000517052 107 ntBASIC1.26□□□□□ -2.21
PPARGC1AQ9UBK2 AC138907.6-201ENST00000568401 126 ntBASIC1.26□□□□□ -2.21
PPARGC1AQ9UBK2 AC138869.1-201ENST00000568623 124 ntBASIC1.26□□□□□ -2.21
PPARGC1AQ9UBK2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.26□□□□□ -2.21
PPARGC1AQ9UBK2 MIR4679-1-201ENST00000637619 75 ntBASIC1.26□□□□□ -2.21
PPARGC1AQ9UBK2 SNORD36A-201ENST00000362874 73 ntBASIC1.25□□□□□ -2.21
PPARGC1AQ9UBK2 Y_RNA.174-201ENST00000363781 105 ntBASIC1.25□□□□□ -2.21
PPARGC1AQ9UBK2 Y_RNA.190-201ENST00000363964 101 ntBASIC1.25□□□□□ -2.21
PPARGC1AQ9UBK2 SNORD114-24-201ENST00000365029 72 ntBASIC1.25□□□□□ -2.21
PPARGC1AQ9UBK2 RNU6-1134P-201ENST00000365156 101 ntBASIC1.25□□□□□ -2.21
PPARGC1AQ9UBK2 AL161932.1-201ENST00000437408 146 ntBASIC1.25□□□□□ -2.21
PPARGC1AQ9UBK2 AC097635.1-201ENST00000450678 155 ntBASIC1.25□□□□□ -2.21
PPARGC1AQ9UBK2 MIR516A2-201ENST00000384888 90 ntBASIC1.24□□□□□ -2.21
PPARGC1AQ9UBK2 MIR516A1-201ENST00000385033 90 ntBASIC1.24□□□□□ -2.21
PPARGC1AQ9UBK2 MIR942-201ENST00000401111 86 ntBASIC1.24□□□□□ -2.21
PPARGC1AQ9UBK2 AC092628.1-201ENST00000436250 252 ntBASIC1.24□□□□□ -2.21
PPARGC1AQ9UBK2 TRAJ51-201ENST00000504127 63 ntBASIC1.24□□□□□ -2.21
PPARGC1AQ9UBK2 AC025627.3-201ENST00000582078 182 ntBASIC1.24□□□□□ -2.21
PPARGC1AQ9UBK2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
PPARGC1AQ9UBK2 RNU6-291P-201ENST00000384720 107 ntBASIC1.23□□□□□ -2.21
PPARGC1AQ9UBK2 RNU6-535P-201ENST00000384722 107 ntBASIC1.23□□□□□ -2.21
PPARGC1AQ9UBK2 MIR450A2-201ENST00000385022 100 ntBASIC1.23□□□□□ -2.21
PPARGC1AQ9UBK2 SNORD105-201ENST00000386910 85 ntBASIC1.23□□□□□ -2.21
PPARGC1AQ9UBK2 AC008608.1-201ENST00000603910 127 ntBASIC1.23□□□□□ -2.21
PPARGC1AQ9UBK2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
PPARGC1AQ9UBK2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
PPARGC1AQ9UBK2 RNU6-1260P-201ENST00000362944 107 ntBASIC1.22□□□□□ -2.21
PPARGC1AQ9UBK2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.22□□□□□ -2.21
PPARGC1AQ9UBK2 RNU6-675P-201ENST00000384236 104 ntBASIC1.22□□□□□ -2.21
PPARGC1AQ9UBK2 Y_RNA.17-201ENST00000362433 111 ntBASIC1.21□□□□□ -2.22
PPARGC1AQ9UBK2 RNU6-392P-201ENST00000364926 101 ntBASIC1.21□□□□□ -2.22
PPARGC1AQ9UBK2 SNORA25.9-201ENST00000365087 128 ntBASIC1.21□□□□□ -2.22
PPARGC1AQ9UBK2 SNORD89-201ENST00000390981 114 ntBASIC1.21□□□□□ -2.22
PPARGC1AQ9UBK2 RNU7-106P-201ENST00000459514 67 ntBASIC1.21□□□□□ -2.22
PPARGC1AQ9UBK2 SNORD124-201ENST00000459577 104 ntBASIC1.21□□□□□ -2.22
PPARGC1AQ9UBK2 Y_RNA.809-201ENST00000516058 95 ntBASIC1.21□□□□□ -2.22
PPARGC1AQ9UBK2 SNORA72.7-201ENST00000516349 94 ntBASIC1.21□□□□□ -2.22
PPARGC1AQ9UBK2 MIR4668-201ENST00000582284 70 ntBASIC1.21□□□□□ -2.22
PPARGC1AQ9UBK2 MIR6078-201ENST00000611069 100 ntBASIC1.21□□□□□ -2.22
PPARGC1AQ9UBK2 Y_RNA.226-201ENST00000364337 114 ntBASIC1.2□□□□□ -2.22
PPARGC1AQ9UBK2 SNORD73B-201ENST00000364394 72 ntBASIC1.2□□□□□ -2.22
PPARGC1AQ9UBK2 RNU6-820P-201ENST00000384273 107 ntBASIC1.2□□□□□ -2.22
PPARGC1AQ9UBK2 MIR520H-201ENST00000385126 88 ntBASIC1.2□□□□□ -2.22
PPARGC1AQ9UBK2 MIR1287-201ENST00000408492 90 ntBASIC1.2□□□□□ -2.22
PPARGC1AQ9UBK2 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
PPARGC1AQ9UBK2 RNU6-519P-201ENST00000410590 108 ntBASIC1.2□□□□□ -2.22
PPARGC1AQ9UBK2 AC244505.6-201ENST00000452829 130 ntBASIC1.2□□□□□ -2.22
PPARGC1AQ9UBK2 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.2□□□□□ -2.22
PPARGC1AQ9UBK2 RNU6-135P-201ENST00000516769 101 ntBASIC1.2□□□□□ -2.22
PPARGC1AQ9UBK2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.2□□□□□ -2.22
PPARGC1AQ9UBK2 MIR499A-201ENST00000384903 122 ntBASIC1.19□□□□□ -2.22
PPARGC1AQ9UBK2 RNU6-466P-201ENST00000391224 103 ntBASIC1.19□□□□□ -2.22
PPARGC1AQ9UBK2 Y_RNA.593-201ENST00000410292 98 ntBASIC1.19□□□□□ -2.22
PPARGC1AQ9UBK2 Y_RNA.620-201ENST00000411009 88 ntBASIC1.19□□□□□ -2.22
PPARGC1AQ9UBK2 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
PPARGC1AQ9UBK2 RNA5SP255-201ENST00000516370 107 ntBASIC1.19□□□□□ -2.22
PPARGC1AQ9UBK2 uc_338.16-201ENST00000621804 95 ntBASIC1.19□□□□□ -2.22
PPARGC1AQ9UBK2 RNU6-219P-201ENST00000364728 107 ntBASIC1.18□□□□□ -2.22
PPARGC1AQ9UBK2 Y_RNA.609-201ENST00000410669 89 ntBASIC1.18□□□□□ -2.22
PPARGC1AQ9UBK2 RNU7-195P-201ENST00000458793 62 ntBASIC1.18□□□□□ -2.22
PPARGC1AQ9UBK2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
PPARGC1AQ9UBK2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PPARGC1AQ9UBK2 SNORD4B-201ENST00000459083 72 ntBASIC1.17□□□□□ -2.22
PPARGC1AQ9UBK2 AC002350.1-201ENST00000490759 375 ntBASIC1.17□□□□□ -2.22
PPARGC1AQ9UBK2 MIR8070-201ENST00000616510 88 ntBASIC1.17□□□□□ -2.22
PPARGC1AQ9UBK2 RNU6-633P-201ENST00000362612 103 ntBASIC1.16□□□□□ -2.22
PPARGC1AQ9UBK2 Y_RNA.283-201ENST00000364798 112 ntBASIC1.16□□□□□ -2.22
PPARGC1AQ9UBK2 MIR599-201ENST00000385069 95 ntBASIC1.16□□□□□ -2.22
PPARGC1AQ9UBK2 RNU6-762P-201ENST00000517107 102 ntBASIC1.16□□□□□ -2.22
PPARGC1AQ9UBK2 MIR4661-201ENST00000582720 75 ntBASIC1.16□□□□□ -2.22
PPARGC1AQ9UBK2 Y_RNA.32-201ENST00000362589 110 ntBASIC1.15□□□□□ -2.23
PPARGC1AQ9UBK2 RNU6-497P-201ENST00000365316 104 ntBASIC1.15□□□□□ -2.23
PPARGC1AQ9UBK2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
PPARGC1AQ9UBK2 MIR573-201ENST00000384964 99 ntBASIC1.15□□□□□ -2.23
PPARGC1AQ9UBK2 SNORA26.2-201ENST00000390922 122 ntBASIC1.15□□□□□ -2.23
PPARGC1AQ9UBK2 RNU6-402P-201ENST00000410678 103 ntBASIC1.15□□□□□ -2.23
PPARGC1AQ9UBK2 RNU7-85P-201ENST00000458851 63 ntBASIC1.15□□□□□ -2.23
PPARGC1AQ9UBK2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.15□□□□□ -2.23
PPARGC1AQ9UBK2 RN7SKP12-201ENST00000516275 143 ntBASIC1.15□□□□□ -2.23
PPARGC1AQ9UBK2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.15□□□□□ -2.23
PPARGC1AQ9UBK2 RNY1P1-201ENST00000364372 112 ntBASIC1.14□□□□□ -2.23
PPARGC1AQ9UBK2 RNA5SP117-201ENST00000365294 118 ntBASIC1.14□□□□□ -2.23
PPARGC1AQ9UBK2 RNY1P4-201ENST00000384595 115 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms