Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MIR4422-201ENST00000581938 83 ntBASIC1.34□□□□□ -2.19
PARPBPQ9NWS1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.33□□□□□ -2.2
PARPBPQ9NWS1 MIR101-2-201ENST00000362195 79 ntBASIC1.33□□□□□ -2.2
PARPBPQ9NWS1 Y_RNA.42-201ENST00000362660 108 ntBASIC1.33□□□□□ -2.2
PARPBPQ9NWS1 MIR125B2-201ENST00000385128 89 ntBASIC1.33□□□□□ -2.2
PARPBPQ9NWS1 RNU7-21P-201ENST00000459430 62 ntBASIC1.33□□□□□ -2.2
PARPBPQ9NWS1 RNU6-1194P-201ENST00000516208 104 ntBASIC1.33□□□□□ -2.2
PARPBPQ9NWS1 SNORA18.5-201ENST00000516616 101 ntBASIC1.33□□□□□ -2.2
PARPBPQ9NWS1 MIR4796-201ENST00000580742 81 ntBASIC1.33□□□□□ -2.2
PARPBPQ9NWS1 MIR3064-201ENST00000581130 66 ntBASIC1.33□□□□□ -2.2
PARPBPQ9NWS1 AC106800.4-201ENST00000614905 153 ntBASIC1.33□□□□□ -2.2
PARPBPQ9NWS1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
PARPBPQ9NWS1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PARPBPQ9NWS1 RNU1-42P-201ENST00000364033 160 ntBASIC1.32□□□□□ -2.2
PARPBPQ9NWS1 RNA5SP245-201ENST00000364239 121 ntBASIC1.32□□□□□ -2.2
PARPBPQ9NWS1 RNU6-811P-201ENST00000384069 107 ntBASIC1.32□□□□□ -2.2
PARPBPQ9NWS1 MIR635-201ENST00000384830 98 ntBASIC1.32□□□□□ -2.2
PARPBPQ9NWS1 AC092628.1-201ENST00000436250 252 ntBASIC1.32□□□□□ -2.2
PARPBPQ9NWS1 RNU6-65P-201ENST00000516332 98 ntBASIC1.32□□□□□ -2.2
PARPBPQ9NWS1 RNU6-902P-201ENST00000517212 91 ntBASIC1.32□□□□□ -2.2
PARPBPQ9NWS1 MIR4676-201ENST00000583078 72 ntBASIC1.32□□□□□ -2.2
PARPBPQ9NWS1 RNU6-624P-201ENST00000363411 107 ntBASIC1.31□□□□□ -2.2
PARPBPQ9NWS1 RPS26P5-201ENST00000418544 335 ntBASIC1.31□□□□□ -2.2
PARPBPQ9NWS1 Y_RNA.697-201ENST00000516776 113 ntBASIC1.31□□□□□ -2.2
PARPBPQ9NWS1 RNU7-156P-201ENST00000517214 74 ntBASIC1.31□□□□□ -2.2
PARPBPQ9NWS1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.31□□□□□ -2.2
PARPBPQ9NWS1 AC008608.1-201ENST00000603910 127 ntBASIC1.31□□□□□ -2.2
PARPBPQ9NWS1 AL645939.4-201ENST00000604495 135 ntBASIC1.31□□□□□ -2.2
PARPBPQ9NWS1 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
PARPBPQ9NWS1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PARPBPQ9NWS1 RNA5SP99-201ENST00000364020 114 ntBASIC1.3□□□□□ -2.2
PARPBPQ9NWS1 SNORD111-201ENST00000408139 94 ntBASIC1.3□□□□□ -2.2
PARPBPQ9NWS1 RNU6-237P-201ENST00000515985 71 ntBASIC1.3□□□□□ -2.2
PARPBPQ9NWS1 RNU6-448P-201ENST00000517052 107 ntBASIC1.3□□□□□ -2.2
PARPBPQ9NWS1 AC104996.3-201ENST00000590718 94 ntBASIC1.3□□□□□ -2.2
PARPBPQ9NWS1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.3□□□□□ -2.2
PARPBPQ9NWS1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
PARPBPQ9NWS1 ZNF209P-201ENST00000593450 2304 ntBASIC1.29□□□□□ -2.2
PARPBPQ9NWS1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.29□□□□□ -2.2
PARPBPQ9NWS1 Y_RNA.56-201ENST00000362798 112 ntBASIC1.29□□□□□ -2.2
PARPBPQ9NWS1 RNU6-776P-201ENST00000364403 104 ntBASIC1.29□□□□□ -2.2
PARPBPQ9NWS1 RNU6-1022P-201ENST00000365049 104 ntBASIC1.29□□□□□ -2.2
PARPBPQ9NWS1 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
PARPBPQ9NWS1 RNU6-129P-201ENST00000391022 107 ntBASIC1.29□□□□□ -2.2
PARPBPQ9NWS1 RNU6-466P-201ENST00000391224 103 ntBASIC1.29□□□□□ -2.2
PARPBPQ9NWS1 MIR1323-201ENST00000408090 73 ntBASIC1.29□□□□□ -2.2
PARPBPQ9NWS1 AL591704.2-201ENST00000421658 181 ntBASIC1.29□□□□□ -2.2
PARPBPQ9NWS1 AL354695.1-201ENST00000427935 228 ntBASIC1.29□□□□□ -2.2
PARPBPQ9NWS1 Y_RNA.809-201ENST00000516058 95 ntBASIC1.29□□□□□ -2.2
PARPBPQ9NWS1 SNORD79.1-201ENST00000516069 84 ntBASIC1.29□□□□□ -2.2
PARPBPQ9NWS1 MIR4769-201ENST00000584126 77 ntBASIC1.29□□□□□ -2.2
PARPBPQ9NWS1 Y_RNA.788-201ENST00000622394 112 ntBASIC1.29□□□□□ -2.2
PARPBPQ9NWS1 SNORA63.2-201ENST00000362603 126 ntBASIC1.28□□□□□ -2.2
PARPBPQ9NWS1 RNU6-161P-201ENST00000363051 106 ntBASIC1.28□□□□□ -2.2
PARPBPQ9NWS1 RNU6-1229P-201ENST00000364295 107 ntBASIC1.28□□□□□ -2.2
PARPBPQ9NWS1 MIR320A-201ENST00000385302 82 ntBASIC1.28□□□□□ -2.2
PARPBPQ9NWS1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
PARPBPQ9NWS1 RNU7-102P-201ENST00000458948 62 ntBASIC1.28□□□□□ -2.2
PARPBPQ9NWS1 RNU6-1108P-201ENST00000516308 104 ntBASIC1.28□□□□□ -2.2
PARPBPQ9NWS1 RNU1-92P-201ENST00000517017 135 ntBASIC1.28□□□□□ -2.2
PARPBPQ9NWS1 AC019288.1-201ENST00000557918 224 ntBASIC1.28□□□□□ -2.2
PARPBPQ9NWS1 MIR548H5-201ENST00000580314 60 ntBASIC1.28□□□□□ -2.2
PARPBPQ9NWS1 TRDV1-202ENST00000621643 102 ntBASIC1.28□□□□□ -2.2
PARPBPQ9NWS1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
PARPBPQ9NWS1 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
PARPBPQ9NWS1 Y_RNA.491-201ENST00000384417 107 ntBASIC1.27□□□□□ -2.21
PARPBPQ9NWS1 SNORA80D-201ENST00000384488 135 ntBASIC1.27□□□□□ -2.21
PARPBPQ9NWS1 RNU6-291P-201ENST00000384720 107 ntBASIC1.27□□□□□ -2.21
PARPBPQ9NWS1 RNU6-765P-201ENST00000516916 99 ntBASIC1.27□□□□□ -2.21
PARPBPQ9NWS1 MIR4303-201ENST00000581299 66 ntBASIC1.27□□□□□ -2.21
PARPBPQ9NWS1 MIR4804-201ENST00000581683 73 ntBASIC1.27□□□□□ -2.21
PARPBPQ9NWS1 SNORD92-201ENST00000585078 85 ntBASIC1.27□□□□□ -2.21
PARPBPQ9NWS1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.27□□□□□ -2.21
PARPBPQ9NWS1 U6.100-201ENST00000636230 99 ntBASIC1.27□□□□□ -2.21
PARPBPQ9NWS1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
PARPBPQ9NWS1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
PARPBPQ9NWS1 MIR26B-201ENST00000362251 77 ntBASIC1.26□□□□□ -2.21
PARPBPQ9NWS1 RNU6-1260P-201ENST00000362944 107 ntBASIC1.26□□□□□ -2.21
PARPBPQ9NWS1 RNU6-1296P-201ENST00000383879 107 ntBASIC1.26□□□□□ -2.21
PARPBPQ9NWS1 RNU6-364P-201ENST00000384387 107 ntBASIC1.26□□□□□ -2.21
PARPBPQ9NWS1 MIR518E-201ENST00000385252 88 ntBASIC1.26□□□□□ -2.21
PARPBPQ9NWS1 MIR519A1-201ENST00000385257 85 ntBASIC1.26□□□□□ -2.21
PARPBPQ9NWS1 AC108667.1-201ENST00000428618 249 ntBASIC1.26□□□□□ -2.21
PARPBPQ9NWS1 AL157834.3-201ENST00000615543 103 ntBASIC1.26□□□□□ -2.21
PARPBPQ9NWS1 AC027335.2-201ENST00000624030 375 ntBASIC1.26□□□□□ -2.21
PARPBPQ9NWS1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PARPBPQ9NWS1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
PARPBPQ9NWS1 RNU6-535P-201ENST00000384722 107 ntBASIC1.25□□□□□ -2.21
PARPBPQ9NWS1 MIR938-201ENST00000401216 83 ntBASIC1.25□□□□□ -2.21
PARPBPQ9NWS1 RNU6-994P-201ENST00000410507 111 ntBASIC1.25□□□□□ -2.21
PARPBPQ9NWS1 RNU7-90P-201ENST00000459216 62 ntBASIC1.25□□□□□ -2.21
PARPBPQ9NWS1 RNA5SP458-201ENST00000516188 119 ntBASIC1.25□□□□□ -2.21
PARPBPQ9NWS1 MIR4781-201ENST00000585250 76 ntBASIC1.25□□□□□ -2.21
PARPBPQ9NWS1 MIR4662A-201ENST00000637499 67 ntBASIC1.25□□□□□ -2.21
PARPBPQ9NWS1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
PARPBPQ9NWS1 MIR378A-201ENST00000362177 66 ntBASIC1.24□□□□□ -2.21
PARPBPQ9NWS1 RNU6-315P-201ENST00000362666 107 ntBASIC1.24□□□□□ -2.21
PARPBPQ9NWS1 Y_RNA.532-201ENST00000384590 113 ntBASIC1.24□□□□□ -2.21
PARPBPQ9NWS1 MIR599-201ENST00000385069 95 ntBASIC1.24□□□□□ -2.21
PARPBPQ9NWS1 SNORA17.3-201ENST00000391159 129 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 246.9 ms