Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 Y_RNA.81-201ENST00000362997 102 ntBASIC0.97□□□□□ -2.25
CCM2LQ9NUG4 RNU6-832P-201ENST00000363319 107 ntBASIC0.97□□□□□ -2.25
CCM2LQ9NUG4 RNA5SP117-201ENST00000365294 118 ntBASIC0.97□□□□□ -2.25
CCM2LQ9NUG4 RNU6-535P-201ENST00000384722 107 ntBASIC0.97□□□□□ -2.25
CCM2LQ9NUG4 MIR216A-201ENST00000385063 110 ntBASIC0.97□□□□□ -2.25
CCM2LQ9NUG4 BX276092.1-201ENST00000427368 251 ntBASIC0.97□□□□□ -2.25
CCM2LQ9NUG4 SNRPGP12-201ENST00000449481 213 ntBASIC0.97□□□□□ -2.25
CCM2LQ9NUG4 AL031737.1-201ENST00000450125 223 ntBASIC0.97□□□□□ -2.25
CCM2LQ9NUG4 MTND5P40-201ENST00000559945 246 ntBASIC0.97□□□□□ -2.25
CCM2LQ9NUG4 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
CCM2LQ9NUG4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CCM2LQ9NUG4 RNU6-1099P-201ENST00000363533 107 ntBASIC0.96□□□□□ -2.26
CCM2LQ9NUG4 RNU4-36P-201ENST00000364294 144 ntBASIC0.96□□□□□ -2.26
CCM2LQ9NUG4 RNU6-756P-201ENST00000383997 107 ntBASIC0.96□□□□□ -2.26
CCM2LQ9NUG4 RNU6-291P-201ENST00000384720 107 ntBASIC0.96□□□□□ -2.26
CCM2LQ9NUG4 SPINT5P-201ENST00000448174 155 ntBASIC0.96□□□□□ -2.26
CCM2LQ9NUG4 Y_RNA.659-201ENST00000515994 113 ntBASIC0.96□□□□□ -2.26
CCM2LQ9NUG4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.96□□□□□ -2.26
CCM2LQ9NUG4 MIR3612-201ENST00000579753 87 ntBASIC0.96□□□□□ -2.26
CCM2LQ9NUG4 Y_RNA.30-201ENST00000362572 97 ntBASIC0.95□□□□□ -2.26
CCM2LQ9NUG4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
CCM2LQ9NUG4 MIR590-201ENST00000385008 97 ntBASIC0.95□□□□□ -2.26
CCM2LQ9NUG4 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
CCM2LQ9NUG4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.95□□□□□ -2.26
CCM2LQ9NUG4 RNU6-755P-201ENST00000364400 103 ntBASIC0.94□□□□□ -2.26
CCM2LQ9NUG4 MIR548G-201ENST00000408442 89 ntBASIC0.94□□□□□ -2.26
CCM2LQ9NUG4 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
CCM2LQ9NUG4 RNU6-469P-201ENST00000516253 101 ntBASIC0.94□□□□□ -2.26
CCM2LQ9NUG4 RNU6-109P-201ENST00000516364 107 ntBASIC0.94□□□□□ -2.26
CCM2LQ9NUG4 RNU6-184P-201ENST00000516514 107 ntBASIC0.94□□□□□ -2.26
CCM2LQ9NUG4 RNU6-135P-201ENST00000516769 101 ntBASIC0.94□□□□□ -2.26
CCM2LQ9NUG4 RNU6-90P-201ENST00000606352 106 ntBASIC0.94□□□□□ -2.26
CCM2LQ9NUG4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.94□□□□□ -2.26
CCM2LQ9NUG4 AC091304.10-201ENST00000641554 121 ntBASIC0.94□□□□□ -2.26
CCM2LQ9NUG4 Y_RNA.78-201ENST00000362970 110 ntBASIC0.93□□□□□ -2.26
CCM2LQ9NUG4 RNU6-147P-201ENST00000383983 107 ntBASIC0.93□□□□□ -2.26
CCM2LQ9NUG4 RNU6-1113P-201ENST00000384348 107 ntBASIC0.93□□□□□ -2.26
CCM2LQ9NUG4 RNU6-795P-201ENST00000516323 103 ntBASIC0.93□□□□□ -2.26
CCM2LQ9NUG4 Y_RNA.32-201ENST00000362589 110 ntBASIC0.92□□□□□ -2.26
CCM2LQ9NUG4 RNU6-170P-201ENST00000362832 104 ntBASIC0.92□□□□□ -2.26
CCM2LQ9NUG4 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
CCM2LQ9NUG4 SNORD45B-201ENST00000364617 72 ntBASIC0.92□□□□□ -2.26
CCM2LQ9NUG4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.92□□□□□ -2.26
CCM2LQ9NUG4 RNU6-904P-201ENST00000516206 101 ntBASIC0.92□□□□□ -2.26
CCM2LQ9NUG4 MIR548Z-201ENST00000584743 97 ntBASIC0.92□□□□□ -2.26
CCM2LQ9NUG4 uc_338.16-201ENST00000621804 95 ntBASIC0.92□□□□□ -2.26
CCM2LQ9NUG4 MIR373-201ENST00000362273 69 ntBASIC0.91□□□□□ -2.26
CCM2LQ9NUG4 RNU6-766P-201ENST00000362478 107 ntBASIC0.91□□□□□ -2.26
CCM2LQ9NUG4 RNU6-153P-201ENST00000364422 104 ntBASIC0.91□□□□□ -2.26
CCM2LQ9NUG4 RNU6-110P-201ENST00000384508 104 ntBASIC0.91□□□□□ -2.26
CCM2LQ9NUG4 MIR635-201ENST00000384830 98 ntBASIC0.91□□□□□ -2.26
CCM2LQ9NUG4 RNA5SP222-201ENST00000411039 105 ntBASIC0.91□□□□□ -2.26
CCM2LQ9NUG4 RNU6-850P-201ENST00000516934 103 ntBASIC0.91□□□□□ -2.26
CCM2LQ9NUG4 AC138907.6-201ENST00000568401 126 ntBASIC0.91□□□□□ -2.26
CCM2LQ9NUG4 AC138869.1-201ENST00000568623 124 ntBASIC0.91□□□□□ -2.26
CCM2LQ9NUG4 AC109327.2-201ENST00000448339 378 ntBASIC0.9□□□□□ -2.27
CCM2LQ9NUG4 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
CCM2LQ9NUG4 PSMC1P5-201ENST00000512850 177 ntBASIC0.9□□□□□ -2.27
CCM2LQ9NUG4 SNORA31.14-201ENST00000516728 116 ntBASIC0.9□□□□□ -2.27
CCM2LQ9NUG4 CYP3A137P-201ENST00000562436 69 ntBASIC0.9□□□□□ -2.27
CCM2LQ9NUG4 MIR4439-201ENST00000583746 80 ntBASIC0.9□□□□□ -2.27
CCM2LQ9NUG4 AC012531.4-201ENST00000616509 177 ntBASIC0.9□□□□□ -2.27
CCM2LQ9NUG4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
CCM2LQ9NUG4 MIR18A-201ENST00000362310 71 ntBASIC0.89□□□□□ -2.27
CCM2LQ9NUG4 Y_RNA.467-201ENST00000384297 102 ntBASIC0.89□□□□□ -2.27
CCM2LQ9NUG4 Y_RNA.601-201ENST00000410500 113 ntBASIC0.89□□□□□ -2.27
CCM2LQ9NUG4 AC092628.1-201ENST00000436250 252 ntBASIC0.89□□□□□ -2.27
CCM2LQ9NUG4 Y_RNA.173-201ENST00000363776 113 ntBASIC0.88□□□□□ -2.27
CCM2LQ9NUG4 Y_RNA.342-201ENST00000365352 113 ntBASIC0.88□□□□□ -2.27
CCM2LQ9NUG4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CCM2LQ9NUG4 AC097635.1-201ENST00000450678 155 ntBASIC0.88□□□□□ -2.27
CCM2LQ9NUG4 SCARNA23-201ENST00000516060 130 ntBASIC0.88□□□□□ -2.27
CCM2LQ9NUG4 RNU6-86P-201ENST00000606534 107 ntBASIC0.88□□□□□ -2.27
CCM2LQ9NUG4 RNU6-1163P-201ENST00000364516 107 ntBASIC0.87□□□□□ -2.27
CCM2LQ9NUG4 Y_RNA.567-201ENST00000384736 106 ntBASIC0.87□□□□□ -2.27
CCM2LQ9NUG4 MIR519A1-201ENST00000385257 85 ntBASIC0.87□□□□□ -2.27
CCM2LQ9NUG4 RNU6-537P-201ENST00000517277 103 ntBASIC0.87□□□□□ -2.27
CCM2LQ9NUG4 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
CCM2LQ9NUG4 Y_RNA.57-201ENST00000362806 113 ntBASIC0.86□□□□□ -2.27
CCM2LQ9NUG4 Y_RNA.95-201ENST00000363079 95 ntBASIC0.86□□□□□ -2.27
CCM2LQ9NUG4 RNA5SP245-201ENST00000364239 121 ntBASIC0.86□□□□□ -2.27
CCM2LQ9NUG4 Y_RNA.495-201ENST00000384435 112 ntBASIC0.86□□□□□ -2.27
CCM2LQ9NUG4 MIR193B-201ENST00000384907 83 ntBASIC0.86□□□□□ -2.27
CCM2LQ9NUG4 SNORD63B-201ENST00000411005 70 ntBASIC0.86□□□□□ -2.27
CCM2LQ9NUG4 AC244505.6-201ENST00000452829 130 ntBASIC0.86□□□□□ -2.27
CCM2LQ9NUG4 TRAJ51-201ENST00000504127 63 ntBASIC0.86□□□□□ -2.27
CCM2LQ9NUG4 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
CCM2LQ9NUG4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.86□□□□□ -2.27
CCM2LQ9NUG4 Y_RNA.107-201ENST00000363190 121 ntBASIC0.85□□□□□ -2.27
CCM2LQ9NUG4 RNU6-1229P-201ENST00000364295 107 ntBASIC0.85□□□□□ -2.27
CCM2LQ9NUG4 RNU6-32P-201ENST00000383948 107 ntBASIC0.85□□□□□ -2.27
CCM2LQ9NUG4 SNORA36.2-201ENST00000384004 127 ntBASIC0.85□□□□□ -2.27
CCM2LQ9NUG4 RNU6-13P-201ENST00000384248 107 ntBASIC0.85□□□□□ -2.27
CCM2LQ9NUG4 RNU6-12P-201ENST00000384604 107 ntBASIC0.85□□□□□ -2.27
CCM2LQ9NUG4 RNU6-41P-201ENST00000384741 107 ntBASIC0.85□□□□□ -2.27
CCM2LQ9NUG4 MIR1273G-201ENST00000577677 100 ntBASIC0.85□□□□□ -2.27
CCM2LQ9NUG4 MIR3678-201ENST00000578455 94 ntBASIC0.85□□□□□ -2.27
CCM2LQ9NUG4 MIR4777-201ENST00000583710 86 ntBASIC0.85□□□□□ -2.27
CCM2LQ9NUG4 Y_RNA.818-201ENST00000618813 71 ntBASIC0.85□□□□□ -2.27
CCM2LQ9NUG4 RNU6-1125P-201ENST00000363601 107 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms