Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 snoU13.9-201ENST00000458927 103 ntBASIC2.02□□□□□ -2.09
ATG3Q9NT62 RNU6-70P-201ENST00000516438 60 ntBASIC2.02□□□□□ -2.09
ATG3Q9NT62 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ATG3Q9NT62 SNORA7.1-201ENST00000363750 139 ntBASIC2.01□□□□□ -2.09
ATG3Q9NT62 RNU6-654P-201ENST00000364373 107 ntBASIC2.01□□□□□ -2.09
ATG3Q9NT62 SNORD77.2-201ENST00000391045 68 ntBASIC2.01□□□□□ -2.09
ATG3Q9NT62 SNORA67.6-201ENST00000391093 99 ntBASIC2.01□□□□□ -2.09
ATG3Q9NT62 MIR1185-1-201ENST00000408598 86 ntBASIC2.01□□□□□ -2.09
ATG3Q9NT62 RNA5SP95-201ENST00000410319 137 ntBASIC2.01□□□□□ -2.09
ATG3Q9NT62 SNORD63B-201ENST00000411005 70 ntBASIC2.01□□□□□ -2.09
ATG3Q9NT62 snoU13.17-201ENST00000458802 104 ntBASIC2.01□□□□□ -2.09
ATG3Q9NT62 Y_RNA.386-201ENST00000383913 105 ntBASIC2□□□□□ -2.09
ATG3Q9NT62 MIR518E-201ENST00000385252 88 ntBASIC2□□□□□ -2.09
ATG3Q9NT62 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2□□□□□ -2.09
ATG3Q9NT62 MIR934-201ENST00000401241 83 ntBASIC2□□□□□ -2.09
ATG3Q9NT62 MIR1265-201ENST00000408444 86 ntBASIC2□□□□□ -2.09
ATG3Q9NT62 AC074348.1-201ENST00000426503 132 ntBASIC2□□□□□ -2.09
ATG3Q9NT62 RPL30P7-201ENST00000479312 323 ntBASIC2□□□□□ -2.09
ATG3Q9NT62 SNORD92-201ENST00000585078 85 ntBASIC2□□□□□ -2.09
ATG3Q9NT62 RNU6-208P-201ENST00000362431 107 ntBASIC1.99□□□□□ -2.09
ATG3Q9NT62 MIR517C-201ENST00000385103 95 ntBASIC1.99□□□□□ -2.09
ATG3Q9NT62 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.99□□□□□ -2.09
ATG3Q9NT62 RNU6-380P-201ENST00000410207 107 ntBASIC1.99□□□□□ -2.09
ATG3Q9NT62 AL606490.4-201ENST00000423117 127 ntBASIC1.99□□□□□ -2.09
ATG3Q9NT62 RNU6-947P-201ENST00000516264 106 ntBASIC1.99□□□□□ -2.09
ATG3Q9NT62 MIR4421-201ENST00000578133 69 ntBASIC1.99□□□□□ -2.09
ATG3Q9NT62 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.99□□□□□ -2.09
ATG3Q9NT62 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.99□□□□□ -2.09
ATG3Q9NT62 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ATG3Q9NT62 MIR489-201ENST00000384923 84 ntBASIC1.98□□□□□ -2.09
ATG3Q9NT62 MT-TN-201ENST00000387400 73 ntBASIC1.98□□□□□ -2.09
ATG3Q9NT62 RNU6-466P-201ENST00000391224 103 ntBASIC1.98□□□□□ -2.09
ATG3Q9NT62 AC015818.7-201ENST00000428754 109 ntBASIC1.98□□□□□ -2.09
ATG3Q9NT62 RNU6-634P-201ENST00000459134 106 ntBASIC1.98□□□□□ -2.09
ATG3Q9NT62 TRAJ51-201ENST00000504127 63 ntBASIC1.98□□□□□ -2.09
ATG3Q9NT62 AC015688.6-201ENST00000577737 104 ntBASIC1.98□□□□□ -2.09
ATG3Q9NT62 AL357312.1-201ENST00000603879 298 ntBASIC1.98□□□□□ -2.09
ATG3Q9NT62 ZNF209P-201ENST00000593450 2304 ntBASIC1.97□□□□□ -2.09
ATG3Q9NT62 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ATG3Q9NT62 MT-TF-201ENST00000387314 71 ntBASIC1.97□□□□□ -2.09
ATG3Q9NT62 RNU6-1194P-201ENST00000516208 104 ntBASIC1.97□□□□□ -2.09
ATG3Q9NT62 MIR2115-201ENST00000516657 100 ntBASIC1.97□□□□□ -2.09
ATG3Q9NT62 RNU6-330P-201ENST00000363015 107 ntBASIC1.96□□□□□ -2.1
ATG3Q9NT62 RNU1-36P-201ENST00000365130 165 ntBASIC1.96□□□□□ -2.1
ATG3Q9NT62 Y_RNA.340-201ENST00000365330 92 ntBASIC1.96□□□□□ -2.1
ATG3Q9NT62 MIR548U-201ENST00000390728 81 ntBASIC1.96□□□□□ -2.1
ATG3Q9NT62 SNORD100-201ENST00000408573 76 ntBASIC1.96□□□□□ -2.1
ATG3Q9NT62 RNU7-195P-201ENST00000458793 62 ntBASIC1.96□□□□□ -2.1
ATG3Q9NT62 RNU6-807P-201ENST00000516805 107 ntBASIC1.96□□□□□ -2.1
ATG3Q9NT62 RNU6-303P-201ENST00000517091 106 ntBASIC1.96□□□□□ -2.1
ATG3Q9NT62 GHRLOS.1-201ENST00000610995 70 ntBASIC1.96□□□□□ -2.1
ATG3Q9NT62 MIR6504-201ENST00000613520 61 ntBASIC1.96□□□□□ -2.1
ATG3Q9NT62 MIR8063-201ENST00000621930 81 ntBASIC1.96□□□□□ -2.1
ATG3Q9NT62 MIR302D-201ENST00000362275 68 ntBASIC1.95□□□□□ -2.1
ATG3Q9NT62 Y_RNA.12-201ENST00000362393 112 ntBASIC1.95□□□□□ -2.1
ATG3Q9NT62 RNU4-58P-201ENST00000363192 141 ntBASIC1.95□□□□□ -2.1
ATG3Q9NT62 RNU6-540P-201ENST00000384622 101 ntBASIC1.95□□□□□ -2.1
ATG3Q9NT62 SNORD93-201ENST00000408813 74 ntBASIC1.95□□□□□ -2.1
ATG3Q9NT62 snoU13.21-201ENST00000459368 105 ntBASIC1.95□□□□□ -2.1
ATG3Q9NT62 RNU6-871P-201ENST00000516122 100 ntBASIC1.95□□□□□ -2.1
ATG3Q9NT62 Y_RNA.681-201ENST00000516445 113 ntBASIC1.95□□□□□ -2.1
ATG3Q9NT62 SNORA31.24-201ENST00000517232 57 ntBASIC1.95□□□□□ -2.1
ATG3Q9NT62 AC013244.2-201ENST00000603396 103 ntBASIC1.95□□□□□ -2.1
ATG3Q9NT62 MIR1297-201ENST00000637311 77 ntBASIC1.95□□□□□ -2.1
ATG3Q9NT62 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ATG3Q9NT62 RNU5F-1-201ENST00000362507 117 ntBASIC1.94□□□□□ -2.1
ATG3Q9NT62 RNU6-403P-201ENST00000363163 104 ntBASIC1.94□□□□□ -2.1
ATG3Q9NT62 Y_RNA.264-201ENST00000364665 102 ntBASIC1.94□□□□□ -2.1
ATG3Q9NT62 RNU6-580P-201ENST00000365159 107 ntBASIC1.94□□□□□ -2.1
ATG3Q9NT62 RNU6-587P-201ENST00000391282 106 ntBASIC1.94□□□□□ -2.1
ATG3Q9NT62 AL133373.1-201ENST00000497098 94 ntBASIC1.94□□□□□ -2.1
ATG3Q9NT62 MIR4285-201ENST00000581001 85 ntBASIC1.94□□□□□ -2.1
ATG3Q9NT62 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.94□□□□□ -2.1
ATG3Q9NT62 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.94□□□□□ -2.1
ATG3Q9NT62 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.94□□□□□ -2.1
ATG3Q9NT62 RNA5SP363-201ENST00000365072 115 ntBASIC1.93□□□□□ -2.1
ATG3Q9NT62 SNORD115-31-201ENST00000365318 82 ntBASIC1.93□□□□□ -2.1
ATG3Q9NT62 RNU6-53P-201ENST00000365367 106 ntBASIC1.93□□□□□ -2.1
ATG3Q9NT62 RNU6-1051P-201ENST00000365471 102 ntBASIC1.93□□□□□ -2.1
ATG3Q9NT62 Y_RNA.536-201ENST00000384621 113 ntBASIC1.93□□□□□ -2.1
ATG3Q9NT62 Y_RNA.596-201ENST00000410462 109 ntBASIC1.93□□□□□ -2.1
ATG3Q9NT62 MIR2113-201ENST00000459007 91 ntBASIC1.93□□□□□ -2.1
ATG3Q9NT62 AC125388.1-201ENST00000459631 156 ntBASIC1.93□□□□□ -2.1
ATG3Q9NT62 RNU11-2P-201ENST00000516898 142 ntBASIC1.93□□□□□ -2.1
ATG3Q9NT62 YWHAEP2-201ENST00000580066 112 ntBASIC1.93□□□□□ -2.1
ATG3Q9NT62 YWHAEP3-201ENST00000582767 121 ntBASIC1.93□□□□□ -2.1
ATG3Q9NT62 MIR377-201ENST00000362145 69 ntBASIC1.92□□□□□ -2.1
ATG3Q9NT62 RNA5SP264-201ENST00000363115 107 ntBASIC1.92□□□□□ -2.1
ATG3Q9NT62 SNORD1A-201ENST00000364968 72 ntBASIC1.92□□□□□ -2.1
ATG3Q9NT62 RNU1-78P-201ENST00000391248 165 ntBASIC1.92□□□□□ -2.1
ATG3Q9NT62 AL354695.1-201ENST00000427935 228 ntBASIC1.92□□□□□ -2.1
ATG3Q9NT62 RNU1-123P-201ENST00000458950 160 ntBASIC1.92□□□□□ -2.1
ATG3Q9NT62 MIR4422-201ENST00000581938 83 ntBASIC1.92□□□□□ -2.1
ATG3Q9NT62 MIR3140-201ENST00000583685 90 ntBASIC1.92□□□□□ -2.1
ATG3Q9NT62 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.92□□□□□ -2.1
ATG3Q9NT62 MIR103A2-201ENST00000362154 78 ntBASIC1.91□□□□□ -2.1
ATG3Q9NT62 Y_RNA.224-201ENST00000364308 111 ntBASIC1.91□□□□□ -2.1
ATG3Q9NT62 RNU1-92P-201ENST00000517017 135 ntBASIC1.91□□□□□ -2.1
ATG3Q9NT62 Y_RNA.207-201ENST00000364142 106 ntBASIC1.9□□□□□ -2.11
ATG3Q9NT62 RNU6-649P-201ENST00000384463 107 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms