Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 U6.90-201ENST00000614007 104 ntBASIC0.97□□□□□ -2.25
CDT1Q9H211 U6.70-201ENST00000620287 104 ntBASIC0.97□□□□□ -2.25
CDT1Q9H211 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.97□□□□□ -2.25
CDT1Q9H211 Y_RNA.95-201ENST00000363079 95 ntBASIC0.96□□□□□ -2.26
CDT1Q9H211 SNORD38.1-201ENST00000363863 68 ntBASIC0.96□□□□□ -2.26
CDT1Q9H211 RNU6-1335P-201ENST00000365426 107 ntBASIC0.96□□□□□ -2.26
CDT1Q9H211 RNU6-49P-201ENST00000384256 107 ntBASIC0.96□□□□□ -2.26
CDT1Q9H211 SNORD89-201ENST00000390981 114 ntBASIC0.96□□□□□ -2.26
CDT1Q9H211 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.96□□□□□ -2.26
CDT1Q9H211 SPINT5P-201ENST00000448174 155 ntBASIC0.96□□□□□ -2.26
CDT1Q9H211 AC067940.1-201ENST00000458411 300 ntBASIC0.96□□□□□ -2.26
CDT1Q9H211 RNU7-56P-201ENST00000458744 62 ntBASIC0.96□□□□□ -2.26
CDT1Q9H211 RNU6-162P-201ENST00000516228 103 ntBASIC0.96□□□□□ -2.26
CDT1Q9H211 MIR4804-201ENST00000581683 73 ntBASIC0.96□□□□□ -2.26
CDT1Q9H211 RNA5SP457-201ENST00000363657 124 ntBASIC0.95□□□□□ -2.26
CDT1Q9H211 Y_RNA.173-201ENST00000363776 113 ntBASIC0.95□□□□□ -2.26
CDT1Q9H211 SNORA72.6-201ENST00000384520 129 ntBASIC0.95□□□□□ -2.26
CDT1Q9H211 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.95□□□□□ -2.26
CDT1Q9H211 RNY4P30-201ENST00000410216 95 ntBASIC0.95□□□□□ -2.26
CDT1Q9H211 AC004941.2-201ENST00000427009 228 ntBASIC0.95□□□□□ -2.26
CDT1Q9H211 FABP5P4-201ENST00000437203 171 ntBASIC0.95□□□□□ -2.26
CDT1Q9H211 RNA5SP436-201ENST00000516020 115 ntBASIC0.95□□□□□ -2.26
CDT1Q9H211 RNU7-156P-201ENST00000517214 74 ntBASIC0.95□□□□□ -2.26
CDT1Q9H211 MIR5582-201ENST00000579697 68 ntBASIC0.95□□□□□ -2.26
CDT1Q9H211 MIR6082-201ENST00000613604 109 ntBASIC0.95□□□□□ -2.26
CDT1Q9H211 Y_RNA.818-201ENST00000618813 71 ntBASIC0.95□□□□□ -2.26
CDT1Q9H211 HSBP1P2-201ENST00000299671 229 ntBASIC0.94□□□□□ -2.26
CDT1Q9H211 MIR1-1-201ENST00000362147 71 ntBASIC0.94□□□□□ -2.26
CDT1Q9H211 Y_RNA.30-201ENST00000362572 97 ntBASIC0.94□□□□□ -2.26
CDT1Q9H211 Y_RNA.93-201ENST00000363066 109 ntBASIC0.94□□□□□ -2.26
CDT1Q9H211 Y_RNA.190-201ENST00000363964 101 ntBASIC0.94□□□□□ -2.26
CDT1Q9H211 RNU6-1131P-201ENST00000364955 107 ntBASIC0.94□□□□□ -2.26
CDT1Q9H211 Y_RNA.342-201ENST00000365352 113 ntBASIC0.94□□□□□ -2.26
CDT1Q9H211 Y_RNA.544-201ENST00000384650 113 ntBASIC0.94□□□□□ -2.26
CDT1Q9H211 MIR100-201ENST00000385259 80 ntBASIC0.94□□□□□ -2.26
CDT1Q9H211 MIR1257-201ENST00000408490 117 ntBASIC0.94□□□□□ -2.26
CDT1Q9H211 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.94□□□□□ -2.26
CDT1Q9H211 SNORA40.13-201ENST00000516379 120 ntBASIC0.94□□□□□ -2.26
CDT1Q9H211 RNA5SP170-201ENST00000517150 101 ntBASIC0.94□□□□□ -2.26
CDT1Q9H211 MIR1273G-201ENST00000577677 100 ntBASIC0.94□□□□□ -2.26
CDT1Q9H211 RNU6-90P-201ENST00000606352 106 ntBASIC0.94□□□□□ -2.26
CDT1Q9H211 Y_RNA.42-201ENST00000362660 108 ntBASIC0.93□□□□□ -2.26
CDT1Q9H211 RNA5SP245-201ENST00000364239 121 ntBASIC0.93□□□□□ -2.26
CDT1Q9H211 Y_RNA.290-201ENST00000364879 114 ntBASIC0.93□□□□□ -2.26
CDT1Q9H211 Y_RNA.567-201ENST00000384736 106 ntBASIC0.93□□□□□ -2.26
CDT1Q9H211 MIR1827-201ENST00000408549 66 ntBASIC0.93□□□□□ -2.26
CDT1Q9H211 RNU7-102P-201ENST00000458948 62 ntBASIC0.93□□□□□ -2.26
CDT1Q9H211 RNU7-106P-201ENST00000459514 67 ntBASIC0.93□□□□□ -2.26
CDT1Q9H211 MTND5P40-201ENST00000559945 246 ntBASIC0.93□□□□□ -2.26
CDT1Q9H211 Y_RNA.107-201ENST00000363190 121 ntBASIC0.92□□□□□ -2.26
CDT1Q9H211 SNORD45B-201ENST00000364617 72 ntBASIC0.92□□□□□ -2.26
CDT1Q9H211 MIR181B2-201ENST00000385004 89 ntBASIC0.92□□□□□ -2.26
CDT1Q9H211 SNRPGP12-201ENST00000449481 213 ntBASIC0.92□□□□□ -2.26
CDT1Q9H211 U7.7-201ENST00000459276 60 ntBASIC0.92□□□□□ -2.26
CDT1Q9H211 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.92□□□□□ -2.26
CDT1Q9H211 RNA5SP255-201ENST00000516370 107 ntBASIC0.92□□□□□ -2.26
CDT1Q9H211 RNU6-850P-201ENST00000516934 103 ntBASIC0.92□□□□□ -2.26
CDT1Q9H211 SNORD92-201ENST00000585078 85 ntBASIC0.92□□□□□ -2.26
CDT1Q9H211 AL590095.2-201ENST00000604136 117 ntBASIC0.92□□□□□ -2.26
CDT1Q9H211 AC103810.7-201ENST00000607821 91 ntBASIC0.92□□□□□ -2.26
CDT1Q9H211 U7.3-201ENST00000616123 62 ntBASIC0.92□□□□□ -2.26
CDT1Q9H211 RNU6-1244P-201ENST00000363614 108 ntBASIC0.91□□□□□ -2.26
CDT1Q9H211 RNU6-977P-201ENST00000516411 103 ntBASIC0.91□□□□□ -2.26
CDT1Q9H211 RNU6-1110P-201ENST00000516462 101 ntBASIC0.91□□□□□ -2.26
CDT1Q9H211 CYP3A137P-201ENST00000562436 69 ntBASIC0.91□□□□□ -2.26
CDT1Q9H211 AC096720.1-201ENST00000604441 183 ntBASIC0.91□□□□□ -2.26
CDT1Q9H211 AC025521.1-201ENST00000621624 286 ntBASIC0.91□□□□□ -2.26
CDT1Q9H211 Y_RNA.10-201ENST00000362371 110 ntBASIC0.9□□□□□ -2.27
CDT1Q9H211 Y_RNA.68-201ENST00000362881 102 ntBASIC0.9□□□□□ -2.27
CDT1Q9H211 RNU6-1255P-201ENST00000363434 112 ntBASIC0.9□□□□□ -2.27
CDT1Q9H211 RNU6-813P-201ENST00000384691 107 ntBASIC0.9□□□□□ -2.27
CDT1Q9H211 MIR938-201ENST00000401216 83 ntBASIC0.9□□□□□ -2.27
CDT1Q9H211 SNORD100-201ENST00000408573 76 ntBASIC0.9□□□□□ -2.27
CDT1Q9H211 TRAJ51-201ENST00000504127 63 ntBASIC0.9□□□□□ -2.27
CDT1Q9H211 RNU6-158P-201ENST00000517104 100 ntBASIC0.9□□□□□ -2.27
CDT1Q9H211 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.9□□□□□ -2.27
CDT1Q9H211 MALAT1.1-201ENST00000618249 95 ntBASIC0.9□□□□□ -2.27
CDT1Q9H211 SNORD58A-201ENST00000383875 65 ntBASIC0.89□□□□□ -2.27
CDT1Q9H211 MIR520F-201ENST00000384824 87 ntBASIC0.89□□□□□ -2.27
CDT1Q9H211 MIR516A2-201ENST00000384888 90 ntBASIC0.89□□□□□ -2.27
CDT1Q9H211 MIR516A1-201ENST00000385033 90 ntBASIC0.89□□□□□ -2.27
CDT1Q9H211 AL136317.1-201ENST00000612653 226 ntBASIC0.89□□□□□ -2.27
CDT1Q9H211 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
CDT1Q9H211 RNU4-58P-201ENST00000363192 141 ntBASIC0.88□□□□□ -2.27
CDT1Q9H211 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
CDT1Q9H211 RNU6-364P-201ENST00000384387 107 ntBASIC0.88□□□□□ -2.27
CDT1Q9H211 RNU6-291P-201ENST00000384720 107 ntBASIC0.88□□□□□ -2.27
CDT1Q9H211 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CDT1Q9H211 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
CDT1Q9H211 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
CDT1Q9H211 RNU6-448P-201ENST00000517052 107 ntBASIC0.88□□□□□ -2.27
CDT1Q9H211 AL513043.2-201ENST00000573941 143 ntBASIC0.88□□□□□ -2.27
CDT1Q9H211 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.88□□□□□ -2.27
CDT1Q9H211 MIR520H-201ENST00000385126 88 ntBASIC0.87□□□□□ -2.27
CDT1Q9H211 SNORD105-201ENST00000386910 85 ntBASIC0.87□□□□□ -2.27
CDT1Q9H211 Y_RNA.681-201ENST00000516445 113 ntBASIC0.87□□□□□ -2.27
CDT1Q9H211 Y_RNA.694-201ENST00000516677 117 ntBASIC0.87□□□□□ -2.27
CDT1Q9H211 MIR924-201ENST00000638017 53 ntBASIC0.87□□□□□ -2.27
CDT1Q9H211 SNORD36A-201ENST00000362874 73 ntBASIC0.86□□□□□ -2.27
CDT1Q9H211 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms