Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 MIR1287-201ENST00000408492 90 ntBASIC1.04□□□□□ -2.24
CCDC113Q9H0I3 AC109327.2-201ENST00000448339 378 ntBASIC1.04□□□□□ -2.24
CCDC113Q9H0I3 MIR4439-201ENST00000583746 80 ntBASIC1.04□□□□□ -2.24
CCDC113Q9H0I3 RNU6-86P-201ENST00000606534 107 ntBASIC1.04□□□□□ -2.24
CCDC113Q9H0I3 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
CCDC113Q9H0I3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC113Q9H0I3 Y_RNA.32-201ENST00000362589 110 ntBASIC1.03□□□□□ -2.24
CCDC113Q9H0I3 Y_RNA.57-201ENST00000362806 113 ntBASIC1.03□□□□□ -2.24
CCDC113Q9H0I3 RNU6-1125P-201ENST00000363601 107 ntBASIC1.03□□□□□ -2.24
CCDC113Q9H0I3 Y_RNA.173-201ENST00000363776 113 ntBASIC1.03□□□□□ -2.24
CCDC113Q9H0I3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.03□□□□□ -2.24
CCDC113Q9H0I3 SNORA36.2-201ENST00000384004 127 ntBASIC1.03□□□□□ -2.24
CCDC113Q9H0I3 RNU6-480P-201ENST00000384332 107 ntBASIC1.03□□□□□ -2.24
CCDC113Q9H0I3 TRAJ51-201ENST00000504127 63 ntBASIC1.03□□□□□ -2.24
CCDC113Q9H0I3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.03□□□□□ -2.24
CCDC113Q9H0I3 Y_RNA.95-201ENST00000363079 95 ntBASIC1.02□□□□□ -2.25
CCDC113Q9H0I3 RNU6-1163P-201ENST00000364516 107 ntBASIC1.02□□□□□ -2.25
CCDC113Q9H0I3 MIR644A-201ENST00000385262 94 ntBASIC1.02□□□□□ -2.25
CCDC113Q9H0I3 SNORD63B-201ENST00000411005 70 ntBASIC1.02□□□□□ -2.25
CCDC113Q9H0I3 PSMC1P5-201ENST00000512850 177 ntBASIC1.02□□□□□ -2.25
CCDC113Q9H0I3 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
CCDC113Q9H0I3 MIR4452-201ENST00000583004 71 ntBASIC1.02□□□□□ -2.25
CCDC113Q9H0I3 MIR18A-201ENST00000362310 71 ntBASIC1.01□□□□□ -2.25
CCDC113Q9H0I3 RNA5SP245-201ENST00000364239 121 ntBASIC1.01□□□□□ -2.25
CCDC113Q9H0I3 Y_RNA.544-201ENST00000384650 113 ntBASIC1.01□□□□□ -2.25
CCDC113Q9H0I3 MIR520E-201ENST00000384867 87 ntBASIC1.01□□□□□ -2.25
CCDC113Q9H0I3 RNU6-795P-201ENST00000516323 103 ntBASIC1.01□□□□□ -2.25
CCDC113Q9H0I3 RNU6-135P-201ENST00000516769 101 ntBASIC1.01□□□□□ -2.25
CCDC113Q9H0I3 MIR3678-201ENST00000578455 94 ntBASIC1.01□□□□□ -2.25
CCDC113Q9H0I3 Y_RNA.81-201ENST00000362997 102 ntBASIC1□□□□□ -2.25
CCDC113Q9H0I3 Y_RNA.818-201ENST00000618813 71 ntBASIC1□□□□□ -2.25
CCDC113Q9H0I3 Y_RNA.96-201ENST00000363092 109 ntBASIC0.99□□□□□ -2.25
CCDC113Q9H0I3 RNU6-1229P-201ENST00000364295 107 ntBASIC0.99□□□□□ -2.25
CCDC113Q9H0I3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
CCDC113Q9H0I3 RNU6-110P-201ENST00000384508 104 ntBASIC0.99□□□□□ -2.25
CCDC113Q9H0I3 MIR516A2-201ENST00000384888 90 ntBASIC0.99□□□□□ -2.25
CCDC113Q9H0I3 MIR516A1-201ENST00000385033 90 ntBASIC0.99□□□□□ -2.25
CCDC113Q9H0I3 Y_RNA.809-201ENST00000516058 95 ntBASIC0.99□□□□□ -2.25
CCDC113Q9H0I3 MIR6857-201ENST00000613267 93 ntBASIC0.99□□□□□ -2.25
CCDC113Q9H0I3 AC091304.10-201ENST00000641554 121 ntBASIC0.99□□□□□ -2.25
CCDC113Q9H0I3 RNU6-243P-201ENST00000391140 107 ntBASIC0.98□□□□□ -2.25
CCDC113Q9H0I3 RNU6-1254P-201ENST00000391266 104 ntBASIC0.98□□□□□ -2.25
CCDC113Q9H0I3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.98□□□□□ -2.25
CCDC113Q9H0I3 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
CCDC113Q9H0I3 RNU6-109P-201ENST00000516364 107 ntBASIC0.98□□□□□ -2.25
CCDC113Q9H0I3 RNU6-184P-201ENST00000516514 107 ntBASIC0.98□□□□□ -2.25
CCDC113Q9H0I3 AC012531.4-201ENST00000616509 177 ntBASIC0.98□□□□□ -2.25
CCDC113Q9H0I3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CCDC113Q9H0I3 Y_RNA.107-201ENST00000363190 121 ntBASIC0.97□□□□□ -2.25
CCDC113Q9H0I3 RNU6-813P-201ENST00000384691 107 ntBASIC0.97□□□□□ -2.25
CCDC113Q9H0I3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.97□□□□□ -2.25
CCDC113Q9H0I3 RNU7-195P-201ENST00000458793 62 ntBASIC0.97□□□□□ -2.25
CCDC113Q9H0I3 RNU7-106P-201ENST00000459514 67 ntBASIC0.97□□□□□ -2.25
CCDC113Q9H0I3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.97□□□□□ -2.25
CCDC113Q9H0I3 Y_RNA.224-201ENST00000364308 111 ntBASIC0.96□□□□□ -2.26
CCDC113Q9H0I3 RNU6-147P-201ENST00000383983 107 ntBASIC0.96□□□□□ -2.26
CCDC113Q9H0I3 MIR181B2-201ENST00000385004 89 ntBASIC0.96□□□□□ -2.26
CCDC113Q9H0I3 MIR599-201ENST00000385069 95 ntBASIC0.96□□□□□ -2.26
CCDC113Q9H0I3 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
CCDC113Q9H0I3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.96□□□□□ -2.26
CCDC113Q9H0I3 Y_RNA.93-201ENST00000363066 109 ntBASIC0.95□□□□□ -2.26
CCDC113Q9H0I3 RNU6-32P-201ENST00000383948 107 ntBASIC0.95□□□□□ -2.26
CCDC113Q9H0I3 RNU6-13P-201ENST00000384248 107 ntBASIC0.95□□□□□ -2.26
CCDC113Q9H0I3 Y_RNA.467-201ENST00000384297 102 ntBASIC0.95□□□□□ -2.26
CCDC113Q9H0I3 RNU6-12P-201ENST00000384604 107 ntBASIC0.95□□□□□ -2.26
CCDC113Q9H0I3 RNU6-41P-201ENST00000384741 107 ntBASIC0.95□□□□□ -2.26
CCDC113Q9H0I3 AC097635.1-201ENST00000450678 155 ntBASIC0.95□□□□□ -2.26
CCDC113Q9H0I3 AC244505.6-201ENST00000452829 130 ntBASIC0.95□□□□□ -2.26
CCDC113Q9H0I3 RPS29P1-201ENST00000465274 159 ntBASIC0.95□□□□□ -2.26
CCDC113Q9H0I3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CCDC113Q9H0I3 SNORD115-24-201ENST00000363528 82 ntBASIC0.94□□□□□ -2.26
CCDC113Q9H0I3 RNU6-1244P-201ENST00000363614 108 ntBASIC0.94□□□□□ -2.26
CCDC113Q9H0I3 Y_RNA.705-201ENST00000516862 110 ntBASIC0.94□□□□□ -2.26
CCDC113Q9H0I3 MIR4777-201ENST00000583710 86 ntBASIC0.94□□□□□ -2.26
CCDC113Q9H0I3 Y_RNA.221-201ENST00000364248 96 ntBASIC0.93□□□□□ -2.26
CCDC113Q9H0I3 MIR519A1-201ENST00000385257 85 ntBASIC0.93□□□□□ -2.26
CCDC113Q9H0I3 RNU6-537P-201ENST00000517277 103 ntBASIC0.93□□□□□ -2.26
CCDC113Q9H0I3 MIR548Z-201ENST00000584743 97 ntBASIC0.93□□□□□ -2.26
CCDC113Q9H0I3 MIR2052-201ENST00000636055 55 ntBASIC0.93□□□□□ -2.26
CCDC113Q9H0I3 MIR140-201ENST00000385282 100 ntBASIC0.92□□□□□ -2.26
CCDC113Q9H0I3 RNU6-972P-201ENST00000391208 107 ntBASIC0.92□□□□□ -2.26
CCDC113Q9H0I3 MIR4639-201ENST00000584938 69 ntBASIC0.92□□□□□ -2.26
CCDC113Q9H0I3 AC103810.7-201ENST00000607821 91 ntBASIC0.92□□□□□ -2.26
CCDC113Q9H0I3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.92□□□□□ -2.26
CCDC113Q9H0I3 RNU6-1260P-201ENST00000362944 107 ntBASIC0.91□□□□□ -2.26
CCDC113Q9H0I3 SNORD18A-201ENST00000363753 72 ntBASIC0.91□□□□□ -2.26
CCDC113Q9H0I3 Y_RNA.495-201ENST00000384435 112 ntBASIC0.91□□□□□ -2.26
CCDC113Q9H0I3 SNORA40.13-201ENST00000516379 120 ntBASIC0.91□□□□□ -2.26
CCDC113Q9H0I3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC113Q9H0I3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC113Q9H0I3 SNORD36A-201ENST00000362874 73 ntBASIC0.9□□□□□ -2.27
CCDC113Q9H0I3 RNU6-524P-201ENST00000384270 107 ntBASIC0.9□□□□□ -2.27
CCDC113Q9H0I3 SNORD28-201ENST00000384706 75 ntBASIC0.9□□□□□ -2.27
CCDC113Q9H0I3 MIR6788-201ENST00000618842 66 ntBASIC0.9□□□□□ -2.27
CCDC113Q9H0I3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CCDC113Q9H0I3 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
CCDC113Q9H0I3 RNU6-153P-201ENST00000364422 104 ntBASIC0.89□□□□□ -2.27
CCDC113Q9H0I3 RNU6-644P-201ENST00000391155 98 ntBASIC0.89□□□□□ -2.27
CCDC113Q9H0I3 MIR548J-201ENST00000408833 112 ntBASIC0.89□□□□□ -2.27
CCDC113Q9H0I3 AC244669.1-204ENST00000621564 178 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms