Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC091304.10-201ENST00000641554 121 ntBASIC1.07□□□□□ -2.24
AMBRA1Q9C0C7 Y_RNA.42-201ENST00000362660 108 ntBASIC1.06□□□□□ -2.24
AMBRA1Q9C0C7 Y_RNA.107-201ENST00000363190 121 ntBASIC1.06□□□□□ -2.24
AMBRA1Q9C0C7 SNORD114-24-201ENST00000365029 72 ntBASIC1.06□□□□□ -2.24
AMBRA1Q9C0C7 Y_RNA.348-201ENST00000365403 103 ntBASIC1.06□□□□□ -2.24
AMBRA1Q9C0C7 MIR520F-201ENST00000384824 87 ntBASIC1.06□□□□□ -2.24
AMBRA1Q9C0C7 RNU7-102P-201ENST00000458948 62 ntBASIC1.06□□□□□ -2.24
AMBRA1Q9C0C7 MIR4777-201ENST00000583710 86 ntBASIC1.06□□□□□ -2.24
AMBRA1Q9C0C7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
AMBRA1Q9C0C7 MIR101-2-201ENST00000362195 79 ntBASIC1.05□□□□□ -2.24
AMBRA1Q9C0C7 SNORD114-27-201ENST00000363766 70 ntBASIC1.05□□□□□ -2.24
AMBRA1Q9C0C7 Y_RNA.374-201ENST00000365606 101 ntBASIC1.05□□□□□ -2.24
AMBRA1Q9C0C7 BX276092.1-201ENST00000427368 251 ntBASIC1.05□□□□□ -2.24
AMBRA1Q9C0C7 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
AMBRA1Q9C0C7 RNU6-158P-201ENST00000517104 100 ntBASIC1.05□□□□□ -2.24
AMBRA1Q9C0C7 RNU6-571P-201ENST00000384128 107 ntBASIC1.04□□□□□ -2.24
AMBRA1Q9C0C7 RNU6-813P-201ENST00000384691 107 ntBASIC1.04□□□□□ -2.24
AMBRA1Q9C0C7 MIR548Z-201ENST00000584743 97 ntBASIC1.04□□□□□ -2.24
AMBRA1Q9C0C7 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
AMBRA1Q9C0C7 AC008608.1-201ENST00000603910 127 ntBASIC1.04□□□□□ -2.24
AMBRA1Q9C0C7 Y_RNA.467-201ENST00000384297 102 ntBASIC1.03□□□□□ -2.24
AMBRA1Q9C0C7 RNU6-905P-201ENST00000384434 107 ntBASIC1.03□□□□□ -2.24
AMBRA1Q9C0C7 SNRPGP12-201ENST00000449481 213 ntBASIC1.03□□□□□ -2.24
AMBRA1Q9C0C7 RNU6-850P-201ENST00000516934 103 ntBASIC1.03□□□□□ -2.24
AMBRA1Q9C0C7 RN7SL793P-201ENST00000583259 296 ntBASIC1.03□□□□□ -2.24
AMBRA1Q9C0C7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
AMBRA1Q9C0C7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
AMBRA1Q9C0C7 Y_RNA.56-201ENST00000362798 112 ntBASIC1.02□□□□□ -2.25
AMBRA1Q9C0C7 Y_RNA.96-201ENST00000363092 109 ntBASIC1.02□□□□□ -2.25
AMBRA1Q9C0C7 RNU6-1125P-201ENST00000363601 107 ntBASIC1.02□□□□□ -2.25
AMBRA1Q9C0C7 RNU6-480P-201ENST00000384332 107 ntBASIC1.02□□□□□ -2.25
AMBRA1Q9C0C7 MIR635-201ENST00000384830 98 ntBASIC1.02□□□□□ -2.25
AMBRA1Q9C0C7 MIR216A-201ENST00000385063 110 ntBASIC1.02□□□□□ -2.25
AMBRA1Q9C0C7 SNORD105-201ENST00000386910 85 ntBASIC1.02□□□□□ -2.25
AMBRA1Q9C0C7 RNU6-644P-201ENST00000391155 98 ntBASIC1.02□□□□□ -2.25
AMBRA1Q9C0C7 SNORD100-201ENST00000408573 76 ntBASIC1.02□□□□□ -2.25
AMBRA1Q9C0C7 Y_RNA.697-201ENST00000516776 113 ntBASIC1.02□□□□□ -2.25
AMBRA1Q9C0C7 AC025627.3-201ENST00000582078 182 ntBASIC1.02□□□□□ -2.25
AMBRA1Q9C0C7 Y_RNA.342-201ENST00000365352 113 ntBASIC1.01□□□□□ -2.25
AMBRA1Q9C0C7 RNY1P4-201ENST00000384595 115 ntBASIC1.01□□□□□ -2.25
AMBRA1Q9C0C7 Y_RNA.536-201ENST00000384621 113 ntBASIC1.01□□□□□ -2.25
AMBRA1Q9C0C7 MIR520H-201ENST00000385126 88 ntBASIC1.01□□□□□ -2.25
AMBRA1Q9C0C7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.01□□□□□ -2.25
AMBRA1Q9C0C7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.01□□□□□ -2.25
AMBRA1Q9C0C7 Y_RNA.705-201ENST00000516862 110 ntBASIC1.01□□□□□ -2.25
AMBRA1Q9C0C7 RNU6-448P-201ENST00000517052 107 ntBASIC1.01□□□□□ -2.25
AMBRA1Q9C0C7 MIR548H5-201ENST00000580314 60 ntBASIC1.01□□□□□ -2.25
AMBRA1Q9C0C7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.01□□□□□ -2.25
AMBRA1Q9C0C7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.01□□□□□ -2.25
AMBRA1Q9C0C7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
AMBRA1Q9C0C7 RNU6-640P-201ENST00000363693 105 ntBASIC1□□□□□ -2.25
AMBRA1Q9C0C7 RNU6-972P-201ENST00000391208 107 ntBASIC1□□□□□ -2.25
AMBRA1Q9C0C7 RNU7-61P-201ENST00000515897 61 ntBASIC1□□□□□ -2.25
AMBRA1Q9C0C7 Y_RNA.694-201ENST00000516677 117 ntBASIC1□□□□□ -2.25
AMBRA1Q9C0C7 AP003327.1-201ENST00000529684 127 ntBASIC1□□□□□ -2.25
AMBRA1Q9C0C7 RNU7-10P-201ENST00000607194 63 ntBASIC1□□□□□ -2.25
AMBRA1Q9C0C7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1□□□□□ -2.25
AMBRA1Q9C0C7 RNU6-1244P-201ENST00000363614 108 ntBASIC0.99□□□□□ -2.25
AMBRA1Q9C0C7 RNU6-535P-201ENST00000384722 107 ntBASIC0.99□□□□□ -2.25
AMBRA1Q9C0C7 MIR181B2-201ENST00000385004 89 ntBASIC0.99□□□□□ -2.25
AMBRA1Q9C0C7 OR2A41P-201ENST00000473586 105 ntBASIC0.99□□□□□ -2.25
AMBRA1Q9C0C7 RNA5SP255-201ENST00000516370 107 ntBASIC0.99□□□□□ -2.25
AMBRA1Q9C0C7 MIR5000-201ENST00000577717 103 ntBASIC0.99□□□□□ -2.25
AMBRA1Q9C0C7 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
AMBRA1Q9C0C7 AC103810.7-201ENST00000607821 91 ntBASIC0.99□□□□□ -2.25
AMBRA1Q9C0C7 RNU6-887P-201ENST00000410660 100 ntBASIC0.98□□□□□ -2.25
AMBRA1Q9C0C7 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
AMBRA1Q9C0C7 Y_RNA.57-201ENST00000362806 113 ntBASIC0.97□□□□□ -2.25
AMBRA1Q9C0C7 SNORD58A-201ENST00000383875 65 ntBASIC0.97□□□□□ -2.25
AMBRA1Q9C0C7 RNU6-291P-201ENST00000384720 107 ntBASIC0.97□□□□□ -2.25
AMBRA1Q9C0C7 RNY4P30-201ENST00000410216 95 ntBASIC0.97□□□□□ -2.25
AMBRA1Q9C0C7 AC092628.1-201ENST00000436250 252 ntBASIC0.97□□□□□ -2.25
AMBRA1Q9C0C7 RNU7-106P-201ENST00000459514 67 ntBASIC0.97□□□□□ -2.25
AMBRA1Q9C0C7 TRAJ51-201ENST00000504127 63 ntBASIC0.97□□□□□ -2.25
AMBRA1Q9C0C7 RNU6-1335P-201ENST00000365426 107 ntBASIC0.96□□□□□ -2.26
AMBRA1Q9C0C7 MIR516A2-201ENST00000384888 90 ntBASIC0.96□□□□□ -2.26
AMBRA1Q9C0C7 MIR516A1-201ENST00000385033 90 ntBASIC0.96□□□□□ -2.26
AMBRA1Q9C0C7 SNORD63B-201ENST00000411005 70 ntBASIC0.96□□□□□ -2.26
AMBRA1Q9C0C7 AC138907.6-201ENST00000568401 126 ntBASIC0.96□□□□□ -2.26
AMBRA1Q9C0C7 AC138869.1-201ENST00000568623 124 ntBASIC0.96□□□□□ -2.26
AMBRA1Q9C0C7 U7.3-201ENST00000616123 62 ntBASIC0.96□□□□□ -2.26
AMBRA1Q9C0C7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
AMBRA1Q9C0C7 RNU6-1298P-201ENST00000362456 101 ntBASIC0.95□□□□□ -2.26
AMBRA1Q9C0C7 RNA5SP245-201ENST00000364239 121 ntBASIC0.95□□□□□ -2.26
AMBRA1Q9C0C7 RNA5SP117-201ENST00000365294 118 ntBASIC0.95□□□□□ -2.26
AMBRA1Q9C0C7 AC002350.1-201ENST00000490759 375 ntBASIC0.95□□□□□ -2.26
AMBRA1Q9C0C7 RNU6-162P-201ENST00000516228 103 ntBASIC0.95□□□□□ -2.26
AMBRA1Q9C0C7 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
AMBRA1Q9C0C7 uc_338.16-201ENST00000621804 95 ntBASIC0.95□□□□□ -2.26
AMBRA1Q9C0C7 Y_RNA.174-201ENST00000363781 105 ntBASIC0.94□□□□□ -2.26
AMBRA1Q9C0C7 RNU6-243P-201ENST00000391140 107 ntBASIC0.94□□□□□ -2.26
AMBRA1Q9C0C7 RNU6-1254P-201ENST00000391266 104 ntBASIC0.94□□□□□ -2.26
AMBRA1Q9C0C7 RNA5SP170-201ENST00000517150 101 ntBASIC0.94□□□□□ -2.26
AMBRA1Q9C0C7 AL513043.2-201ENST00000573941 143 ntBASIC0.94□□□□□ -2.26
AMBRA1Q9C0C7 MIR4661-201ENST00000582720 75 ntBASIC0.94□□□□□ -2.26
AMBRA1Q9C0C7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.94□□□□□ -2.26
AMBRA1Q9C0C7 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.94□□□□□ -2.26
AMBRA1Q9C0C7 SNORD36A-201ENST00000362874 73 ntBASIC0.93□□□□□ -2.26
AMBRA1Q9C0C7 MIR193B-201ENST00000384907 83 ntBASIC0.93□□□□□ -2.26
AMBRA1Q9C0C7 MIR519A1-201ENST00000385257 85 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms