Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC244098.3-201ENST00000424803 96 ntBASIC2.31□□□□□ -2.04
COL25A1Q9BXS0 AC097635.1-201ENST00000450678 155 ntBASIC2.31□□□□□ -2.04
COL25A1Q9BXS0 RN7SL274P-201ENST00000492268 272 ntBASIC2.31□□□□□ -2.04
COL25A1Q9BXS0 RNU6-542P-201ENST00000516405 103 ntBASIC2.31□□□□□ -2.04
COL25A1Q9BXS0 SNORA31.17-201ENST00000516953 127 ntBASIC2.31□□□□□ -2.04
COL25A1Q9BXS0 MIR4446-201ENST00000578505 67 ntBASIC2.31□□□□□ -2.04
COL25A1Q9BXS0 SNORA25.5-201ENST00000363782 126 ntBASIC2.3□□□□□ -2.04
COL25A1Q9BXS0 RNU6-392P-201ENST00000364926 101 ntBASIC2.3□□□□□ -2.04
COL25A1Q9BXS0 Y_RNA.375-201ENST00000365625 101 ntBASIC2.3□□□□□ -2.04
COL25A1Q9BXS0 RNU6-808P-201ENST00000391233 108 ntBASIC2.3□□□□□ -2.04
COL25A1Q9BXS0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.3□□□□□ -2.04
COL25A1Q9BXS0 MIR18B-201ENST00000454574 71 ntBASIC2.3□□□□□ -2.04
COL25A1Q9BXS0 snoU13.25-201ENST00000458945 104 ntBASIC2.3□□□□□ -2.04
COL25A1Q9BXS0 Y_RNA.697-201ENST00000516776 113 ntBASIC2.3□□□□□ -2.04
COL25A1Q9BXS0 SNRPGP19-201ENST00000603826 189 ntBASIC2.3□□□□□ -2.04
COL25A1Q9BXS0 MIR6516-201ENST00000630554 81 ntBASIC2.3□□□□□ -2.04
COL25A1Q9BXS0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL25A1Q9BXS0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
COL25A1Q9BXS0 RNU6-369P-201ENST00000362515 102 ntBASIC2.29□□□□□ -2.04
COL25A1Q9BXS0 RNA5SP192-201ENST00000364404 120 ntBASIC2.29□□□□□ -2.04
COL25A1Q9BXS0 RNU1-51P-201ENST00000365345 176 ntBASIC2.29□□□□□ -2.04
COL25A1Q9BXS0 RNA5SP182-201ENST00000516064 82 ntBASIC2.29□□□□□ -2.04
COL25A1Q9BXS0 RNU6-1265P-201ENST00000516342 103 ntBASIC2.29□□□□□ -2.04
COL25A1Q9BXS0 MIR514B-201ENST00000516774 80 ntBASIC2.29□□□□□ -2.04
COL25A1Q9BXS0 MIR3920-201ENST00000581751 86 ntBASIC2.29□□□□□ -2.04
COL25A1Q9BXS0 U1.36-201ENST00000620684 176 ntBASIC2.29□□□□□ -2.04
COL25A1Q9BXS0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.29□□□□□ -2.04
COL25A1Q9BXS0 RNU6-940P-201ENST00000363433 104 ntBASIC2.28□□□□□ -2.04
COL25A1Q9BXS0 RNU6-580P-201ENST00000365159 107 ntBASIC2.28□□□□□ -2.04
COL25A1Q9BXS0 AP003716.2-201ENST00000528260 108 ntBASIC2.28□□□□□ -2.04
COL25A1Q9BXS0 MIR4285-201ENST00000581001 85 ntBASIC2.28□□□□□ -2.04
COL25A1Q9BXS0 MIR3670-2-201ENST00000582974 65 ntBASIC2.28□□□□□ -2.04
COL25A1Q9BXS0 MIR3670-1-201ENST00000584160 65 ntBASIC2.28□□□□□ -2.04
COL25A1Q9BXS0 MIR3670-3-201ENST00000584855 65 ntBASIC2.28□□□□□ -2.04
COL25A1Q9BXS0 MIR3670-4-201ENST00000612260 65 ntBASIC2.28□□□□□ -2.04
COL25A1Q9BXS0 RNA5SP393-201ENST00000363423 117 ntBASIC2.27□□□□□ -2.05
COL25A1Q9BXS0 RNU6-668P-201ENST00000364180 107 ntBASIC2.27□□□□□ -2.05
COL25A1Q9BXS0 SNORA16B-201ENST00000364674 135 ntBASIC2.27□□□□□ -2.05
COL25A1Q9BXS0 U3.27-201ENST00000391237 200 ntBASIC2.27□□□□□ -2.05
COL25A1Q9BXS0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.27□□□□□ -2.05
COL25A1Q9BXS0 AL161935.2-201ENST00000414627 60 ntBASIC2.27□□□□□ -2.05
COL25A1Q9BXS0 MTND4LP1-201ENST00000446263 157 ntBASIC2.27□□□□□ -2.05
COL25A1Q9BXS0 RNU6-922P-201ENST00000516753 99 ntBASIC2.27□□□□□ -2.05
COL25A1Q9BXS0 MIR5194-201ENST00000582634 120 ntBASIC2.27□□□□□ -2.05
COL25A1Q9BXS0 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.27□□□□□ -2.05
COL25A1Q9BXS0 MIR6895-201ENST00000613497 78 ntBASIC2.27□□□□□ -2.05
COL25A1Q9BXS0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL25A1Q9BXS0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
COL25A1Q9BXS0 SNORD114-22-201ENST00000365423 72 ntBASIC2.26□□□□□ -2.05
COL25A1Q9BXS0 RNU6-936P-201ENST00000384005 107 ntBASIC2.26□□□□□ -2.05
COL25A1Q9BXS0 MIR599-201ENST00000385069 95 ntBASIC2.26□□□□□ -2.05
COL25A1Q9BXS0 MIR6082-201ENST00000613604 109 ntBASIC2.26□□□□□ -2.05
COL25A1Q9BXS0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.26□□□□□ -2.05
COL25A1Q9BXS0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
COL25A1Q9BXS0 Y_RNA.13-201ENST00000362403 112 ntBASIC2.25□□□□□ -2.05
COL25A1Q9BXS0 RNA5SP259-201ENST00000365541 109 ntBASIC2.25□□□□□ -2.05
COL25A1Q9BXS0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.25□□□□□ -2.05
COL25A1Q9BXS0 SUMO1P4-201ENST00000429430 302 ntBASIC2.25□□□□□ -2.05
COL25A1Q9BXS0 MIR4303-201ENST00000581299 66 ntBASIC2.25□□□□□ -2.05
COL25A1Q9BXS0 AC023934.1-201ENST00000574529 2389 ntBASIC2.25□□□□□ -2.05
COL25A1Q9BXS0 SNORD113-4-201ENST00000364802 75 ntBASIC2.24□□□□□ -2.05
COL25A1Q9BXS0 MIR598-201ENST00000384868 97 ntBASIC2.24□□□□□ -2.05
COL25A1Q9BXS0 MIR513A1-201ENST00000385138 129 ntBASIC2.24□□□□□ -2.05
COL25A1Q9BXS0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.24□□□□□ -2.05
COL25A1Q9BXS0 MIR1185-1-201ENST00000408598 86 ntBASIC2.24□□□□□ -2.05
COL25A1Q9BXS0 RNA5SP102-201ENST00000516865 106 ntBASIC2.24□□□□□ -2.05
COL25A1Q9BXS0 FO624990.1-201ENST00000636373 85 ntBASIC2.24□□□□□ -2.05
COL25A1Q9BXS0 AL596028.1-201ENST00000326971 197 ntBASIC2.23□□□□□ -2.05
COL25A1Q9BXS0 Y_RNA.68-201ENST00000362881 102 ntBASIC2.23□□□□□ -2.05
COL25A1Q9BXS0 RNA5SP117-201ENST00000365294 118 ntBASIC2.23□□□□□ -2.05
COL25A1Q9BXS0 RNU6-1184P-201ENST00000384588 108 ntBASIC2.23□□□□□ -2.05
COL25A1Q9BXS0 RNA5SP210-201ENST00000391034 120 ntBASIC2.23□□□□□ -2.05
COL25A1Q9BXS0 RNA5SP95-201ENST00000410319 137 ntBASIC2.23□□□□□ -2.05
COL25A1Q9BXS0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.23□□□□□ -2.05
COL25A1Q9BXS0 RNU7-185P-201ENST00000459215 60 ntBASIC2.23□□□□□ -2.05
COL25A1Q9BXS0 RNU7-95P-201ENST00000459222 64 ntBASIC2.23□□□□□ -2.05
COL25A1Q9BXS0 SCARNA21.1-201ENST00000515996 128 ntBASIC2.23□□□□□ -2.05
COL25A1Q9BXS0 SNORA25.15-201ENST00000516487 89 ntBASIC2.23□□□□□ -2.05
COL25A1Q9BXS0 AC138907.6-201ENST00000568401 126 ntBASIC2.23□□□□□ -2.05
COL25A1Q9BXS0 AC138869.1-201ENST00000568623 124 ntBASIC2.23□□□□□ -2.05
COL25A1Q9BXS0 ZNF355P-201ENST00000427301 3216 ntBASIC2.23□□□□□ -2.05
COL25A1Q9BXS0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.22□□□□□ -2.05
COL25A1Q9BXS0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL25A1Q9BXS0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL25A1Q9BXS0 SNORD75.2-201ENST00000408784 58 ntBASIC2.22□□□□□ -2.05
COL25A1Q9BXS0 RNU6-765P-201ENST00000516916 99 ntBASIC2.22□□□□□ -2.05
COL25A1Q9BXS0 RNU6-250P-201ENST00000516958 103 ntBASIC2.22□□□□□ -2.05
COL25A1Q9BXS0 RNU6-1057P-201ENST00000517162 102 ntBASIC2.22□□□□□ -2.05
COL25A1Q9BXS0 RNU6-1335P-201ENST00000365426 107 ntBASIC2.21□□□□□ -2.06
COL25A1Q9BXS0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
COL25A1Q9BXS0 AC010297.1-201ENST00000623948 149 ntBASIC2.21□□□□□ -2.06
COL25A1Q9BXS0 AC073869.9-201ENST00000641610 120 ntBASIC2.21□□□□□ -2.06
COL25A1Q9BXS0 Y_RNA.433-201ENST00000384089 102 ntBASIC2.2□□□□□ -2.06
COL25A1Q9BXS0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.2□□□□□ -2.06
COL25A1Q9BXS0 RNU7-24P-201ENST00000458867 62 ntBASIC2.2□□□□□ -2.06
COL25A1Q9BXS0 AL133373.1-201ENST00000497098 94 ntBASIC2.2□□□□□ -2.06
COL25A1Q9BXS0 RNU6-287P-201ENST00000516230 98 ntBASIC2.2□□□□□ -2.06
COL25A1Q9BXS0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.2□□□□□ -2.06
COL25A1Q9BXS0 AC103810.8-201ENST00000607347 118 ntBASIC2.2□□□□□ -2.06
COL25A1Q9BXS0 GHRLOS.1-201ENST00000610995 70 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 220.6 ms