Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC106800.4-201ENST00000614905 153 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
TRIM56Q9BRZ2 SNORA17.3-201ENST00000391159 129 ntBASIC1.75□□□□□ -2.13
TRIM56Q9BRZ2 RNU7-21P-201ENST00000459430 62 ntBASIC1.75□□□□□ -2.13
TRIM56Q9BRZ2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM56Q9BRZ2 MIR4255-201ENST00000579351 72 ntBASIC1.75□□□□□ -2.13
TRIM56Q9BRZ2 RNA5SP363-201ENST00000365072 115 ntBASIC1.74□□□□□ -2.13
TRIM56Q9BRZ2 RNU7-90P-201ENST00000459216 62 ntBASIC1.74□□□□□ -2.13
TRIM56Q9BRZ2 SNORD79.1-201ENST00000516069 84 ntBASIC1.74□□□□□ -2.13
TRIM56Q9BRZ2 TRAJ51-201ENST00000504127 63 ntBASIC1.73□□□□□ -2.13
TRIM56Q9BRZ2 AC104996.3-201ENST00000590718 94 ntBASIC1.73□□□□□ -2.13
TRIM56Q9BRZ2 AC084768.2-201ENST00000622736 221 ntBASIC1.73□□□□□ -2.13
TRIM56Q9BRZ2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
TRIM56Q9BRZ2 RNU6-624P-201ENST00000363411 107 ntBASIC1.72□□□□□ -2.13
TRIM56Q9BRZ2 Y_RNA.226-201ENST00000364337 114 ntBASIC1.72□□□□□ -2.13
TRIM56Q9BRZ2 Y_RNA.363-201ENST00000365529 113 ntBASIC1.72□□□□□ -2.13
TRIM56Q9BRZ2 RNU6-910P-201ENST00000390844 107 ntBASIC1.72□□□□□ -2.13
TRIM56Q9BRZ2 RNU6-380P-201ENST00000410207 107 ntBASIC1.72□□□□□ -2.13
TRIM56Q9BRZ2 RPS26P5-201ENST00000418544 335 ntBASIC1.72□□□□□ -2.13
TRIM56Q9BRZ2 RNU7-195P-201ENST00000458793 62 ntBASIC1.72□□□□□ -2.13
TRIM56Q9BRZ2 RNU6-75P-201ENST00000515944 104 ntBASIC1.72□□□□□ -2.13
TRIM56Q9BRZ2 Y_RNA.809-201ENST00000516058 95 ntBASIC1.72□□□□□ -2.13
TRIM56Q9BRZ2 Y_RNA.697-201ENST00000516776 113 ntBASIC1.72□□□□□ -2.13
TRIM56Q9BRZ2 RNU7-156P-201ENST00000517214 74 ntBASIC1.72□□□□□ -2.13
TRIM56Q9BRZ2 MIR4781-201ENST00000585250 76 ntBASIC1.72□□□□□ -2.13
TRIM56Q9BRZ2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.72□□□□□ -2.13
TRIM56Q9BRZ2 Y_RNA.42-201ENST00000362660 108 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 RNU6-1260P-201ENST00000362944 107 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 RNU6-957P-201ENST00000363652 99 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 RNU6-776P-201ENST00000364403 104 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 RNU6-1022P-201ENST00000365049 104 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 RNU6-364P-201ENST00000384387 107 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 RNU6-994P-201ENST00000410507 111 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 AC092628.1-201ENST00000436250 252 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 AC097635.1-201ENST00000450678 155 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 FGF7P7-201ENST00000514120 227 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 Y_RNA.660-201ENST00000516002 120 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 RNU7-40P-201ENST00000516397 64 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 RNU6-557P-201ENST00000516842 110 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 SNORA70.22-201ENST00000517160 124 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 AC023827.1-201ENST00000569247 97 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 MIR3064-201ENST00000581130 66 ntBASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRIM56Q9BRZ2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.7□□□□□ -2.14
TRIM56Q9BRZ2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRIM56Q9BRZ2 RNU6-1094P-201ENST00000362416 104 ntBASIC1.7□□□□□ -2.14
TRIM56Q9BRZ2 SNORA25.9-201ENST00000365087 128 ntBASIC1.7□□□□□ -2.14
TRIM56Q9BRZ2 Y_RNA.491-201ENST00000384417 107 ntBASIC1.7□□□□□ -2.14
TRIM56Q9BRZ2 SNORA18.5-201ENST00000516616 101 ntBASIC1.7□□□□□ -2.14
TRIM56Q9BRZ2 AC138907.6-201ENST00000568401 126 ntBASIC1.7□□□□□ -2.14
TRIM56Q9BRZ2 AC138869.1-201ENST00000568623 124 ntBASIC1.7□□□□□ -2.14
TRIM56Q9BRZ2 MIR4676-201ENST00000583078 72 ntBASIC1.7□□□□□ -2.14
TRIM56Q9BRZ2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.7□□□□□ -2.14
TRIM56Q9BRZ2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TRIM56Q9BRZ2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TRIM56Q9BRZ2 RNA5SP190-201ENST00000365222 118 ntBASIC1.69□□□□□ -2.14
TRIM56Q9BRZ2 RNA5SP292-201ENST00000390974 118 ntBASIC1.69□□□□□ -2.14
TRIM56Q9BRZ2 MIR938-201ENST00000401216 83 ntBASIC1.69□□□□□ -2.14
TRIM56Q9BRZ2 SNORD13-201ENST00000459299 104 ntBASIC1.69□□□□□ -2.14
TRIM56Q9BRZ2 snoU13.31-201ENST00000607291 104 ntBASIC1.69□□□□□ -2.14
TRIM56Q9BRZ2 MIR378A-201ENST00000362177 66 ntBASIC1.68□□□□□ -2.14
TRIM56Q9BRZ2 RNU6-132P-201ENST00000383863 107 ntBASIC1.68□□□□□ -2.14
TRIM56Q9BRZ2 AC015818.7-201ENST00000428754 109 ntBASIC1.68□□□□□ -2.14
TRIM56Q9BRZ2 AL450471.1-201ENST00000447509 127 ntBASIC1.68□□□□□ -2.14
TRIM56Q9BRZ2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TRIM56Q9BRZ2 SNORA63.2-201ENST00000362603 126 ntBASIC1.67□□□□□ -2.14
TRIM56Q9BRZ2 RNU6-478P-201ENST00000363904 110 ntBASIC1.67□□□□□ -2.14
TRIM56Q9BRZ2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRIM56Q9BRZ2 MIR518E-201ENST00000385252 88 ntBASIC1.67□□□□□ -2.14
TRIM56Q9BRZ2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.67□□□□□ -2.14
TRIM56Q9BRZ2 MIR1287-201ENST00000408492 90 ntBASIC1.67□□□□□ -2.14
TRIM56Q9BRZ2 SNORA25.15-201ENST00000516487 89 ntBASIC1.67□□□□□ -2.14
TRIM56Q9BRZ2 RNU6-448P-201ENST00000517052 107 ntBASIC1.67□□□□□ -2.14
TRIM56Q9BRZ2 AL645939.4-201ENST00000604495 135 ntBASIC1.67□□□□□ -2.14
TRIM56Q9BRZ2 MIR7111-201ENST00000619751 72 ntBASIC1.67□□□□□ -2.14
TRIM56Q9BRZ2 TRDV1-202ENST00000621643 102 ntBASIC1.67□□□□□ -2.14
TRIM56Q9BRZ2 MIRLET7F1-201ENST00000362202 87 ntBASIC1.66□□□□□ -2.14
TRIM56Q9BRZ2 RNU6-686P-201ENST00000364839 107 ntBASIC1.66□□□□□ -2.14
TRIM56Q9BRZ2 AC027335.2-201ENST00000624030 375 ntBASIC1.66□□□□□ -2.14
TRIM56Q9BRZ2 RNU6-535P-201ENST00000384722 107 ntBASIC1.65□□□□□ -2.15
TRIM56Q9BRZ2 SNORA67.5-201ENST00000391036 107 ntBASIC1.65□□□□□ -2.15
TRIM56Q9BRZ2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TRIM56Q9BRZ2 AC067940.1-201ENST00000458411 300 ntBASIC1.65□□□□□ -2.15
TRIM56Q9BRZ2 RNU6-977P-201ENST00000516411 103 ntBASIC1.65□□□□□ -2.15
TRIM56Q9BRZ2 AC145423.2-201ENST00000610631 239 ntBASIC1.65□□□□□ -2.15
TRIM56Q9BRZ2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TRIM56Q9BRZ2 Y_RNA.239-201ENST00000364444 113 ntBASIC1.64□□□□□ -2.15
TRIM56Q9BRZ2 Y_RNA.264-201ENST00000364665 102 ntBASIC1.64□□□□□ -2.15
TRIM56Q9BRZ2 MIR599-201ENST00000385069 95 ntBASIC1.64□□□□□ -2.15
TRIM56Q9BRZ2 MIRLET7A1-201ENST00000362295 80 ntBASIC1.63□□□□□ -2.15
TRIM56Q9BRZ2 MIR100-201ENST00000385259 80 ntBASIC1.63□□□□□ -2.15
TRIM56Q9BRZ2 SNORD77.2-201ENST00000391045 68 ntBASIC1.63□□□□□ -2.15
TRIM56Q9BRZ2 RNU7-102P-201ENST00000458948 62 ntBASIC1.63□□□□□ -2.15
TRIM56Q9BRZ2 MIR4804-201ENST00000581683 73 ntBASIC1.63□□□□□ -2.15
TRIM56Q9BRZ2 U7.4-201ENST00000614961 63 ntBASIC1.63□□□□□ -2.15
TRIM56Q9BRZ2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 MIR1-1-201ENST00000362147 71 ntBASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 RNU6-161P-201ENST00000363051 106 ntBASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 SNORA25-201ENST00000384384 134 ntBASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 RNU1-119P-201ENST00000391122 165 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms