Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MIR5009-201ENST00000578736 100 ntBASIC0.41□□□□□ -2.34
EBF4Q9BQW3 MIR7111-201ENST00000619751 72 ntBASIC0.41□□□□□ -2.34
EBF4Q9BQW3 MIR450A1-201ENST00000362262 91 ntBASIC0.4□□□□□ -2.35
EBF4Q9BQW3 RNA5SP517-201ENST00000364724 117 ntBASIC0.4□□□□□ -2.35
EBF4Q9BQW3 Y_RNA.281-201ENST00000364774 94 ntBASIC0.4□□□□□ -2.35
EBF4Q9BQW3 RNA5SP117-201ENST00000365294 118 ntBASIC0.4□□□□□ -2.35
EBF4Q9BQW3 RNU6-44P-201ENST00000384045 107 ntBASIC0.4□□□□□ -2.35
EBF4Q9BQW3 Y_RNA.467-201ENST00000384297 102 ntBASIC0.4□□□□□ -2.35
EBF4Q9BQW3 RNY4P18-201ENST00000391107 89 ntBASIC0.4□□□□□ -2.35
EBF4Q9BQW3 RPL39P34-201ENST00000477141 156 ntBASIC0.4□□□□□ -2.35
EBF4Q9BQW3 RNU6-850P-201ENST00000516934 103 ntBASIC0.4□□□□□ -2.35
EBF4Q9BQW3 AC018659.1-201ENST00000551083 169 ntBASIC0.4□□□□□ -2.35
EBF4Q9BQW3 MIR101-2-201ENST00000362195 79 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 Y_RNA.49-201ENST00000362714 112 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 RNU6-1099P-201ENST00000363533 107 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 RNU6-1163P-201ENST00000364516 107 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 RNU6-1107P-201ENST00000364817 104 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 RNU6-1014P-201ENST00000383940 103 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 RNU6-106P-201ENST00000384405 107 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 MIR516A2-201ENST00000384888 90 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 MIR516A1-201ENST00000385033 90 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 RNU6-554P-201ENST00000410466 106 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 SNRPGP12-201ENST00000449481 213 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 RNU7-195P-201ENST00000458793 62 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 RNU6-589P-201ENST00000516485 107 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 RNA5SP94-201ENST00000516917 108 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 AP003327.1-201ENST00000529684 127 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 MIR4752-201ENST00000579672 72 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 SNORA25.18-201ENST00000607153 114 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 AL442128.1-201ENST00000615151 90 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 AC012531.4-201ENST00000616509 177 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.39□□□□□ -2.35
EBF4Q9BQW3 Y_RNA.56-201ENST00000362798 112 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 RNU6-832P-201ENST00000363319 107 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 Y_RNA.221-201ENST00000364248 96 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 RNU6-1325P-201ENST00000364905 105 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 Y_RNA.507-201ENST00000384500 99 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 RNU6-880P-201ENST00000384526 107 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 MIR590-201ENST00000385008 97 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 SNORD63B-201ENST00000411005 70 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 AC098934.3-201ENST00000430450 190 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 SPINT5P-201ENST00000448174 155 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 AC109327.2-201ENST00000448339 378 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 SNORA68.3-201ENST00000515906 83 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 RNU7-161P-201ENST00000517289 62 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.38□□□□□ -2.35
EBF4Q9BQW3 RNU6-86P-201ENST00000606534 107 ntBASIC0.38□□□□□ -2.35
EBF4Q9BQW3 Y_RNA.309-201ENST00000365046 111 ntBASIC0.37□□□□□ -2.35
EBF4Q9BQW3 Y_RNA.323-201ENST00000365157 109 ntBASIC0.37□□□□□ -2.35
EBF4Q9BQW3 SNORD28-201ENST00000384706 75 ntBASIC0.37□□□□□ -2.35
EBF4Q9BQW3 Y_RNA.567-201ENST00000384736 106 ntBASIC0.37□□□□□ -2.35
EBF4Q9BQW3 MIR548I2-201ENST00000408348 149 ntBASIC0.37□□□□□ -2.35
EBF4Q9BQW3 MIR548G-201ENST00000408442 89 ntBASIC0.37□□□□□ -2.35
EBF4Q9BQW3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.37□□□□□ -2.35
EBF4Q9BQW3 RNU6-1018P-201ENST00000516577 106 ntBASIC0.37□□□□□ -2.35
EBF4Q9BQW3 RNU6-229P-201ENST00000516614 102 ntBASIC0.37□□□□□ -2.35
EBF4Q9BQW3 RNU6-537P-201ENST00000517277 103 ntBASIC0.37□□□□□ -2.35
EBF4Q9BQW3 MTND5P40-201ENST00000559945 246 ntBASIC0.37□□□□□ -2.35
EBF4Q9BQW3 AC244669.1-204ENST00000621564 178 ntBASIC0.37□□□□□ -2.35
EBF4Q9BQW3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
EBF4Q9BQW3 SNORD115-24-201ENST00000363528 82 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 Y_RNA.173-201ENST00000363776 113 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 SNORD38.1-201ENST00000363863 68 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 Y_RNA.291-201ENST00000364886 113 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 RNU6-215P-201ENST00000365169 102 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 RNU6-1056P-201ENST00000383996 107 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 MIR635-201ENST00000384830 98 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 MIR598-201ENST00000384868 97 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 MIR1912-201ENST00000410389 80 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 AC244505.6-201ENST00000452829 130 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 RNU6-162P-201ENST00000516228 103 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 RN7SKP12-201ENST00000516275 143 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 RNA5SP47-201ENST00000517230 109 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 AC141557.1-201ENST00000540982 400 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 MIR4777-201ENST00000583710 86 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 AC025521.1-201ENST00000621624 286 ntBASIC0.36□□□□□ -2.35
EBF4Q9BQW3 RNA5SP347-201ENST00000362445 119 ntBASIC0.35□□□□□ -2.35
EBF4Q9BQW3 RNY3P2-201ENST00000362918 102 ntBASIC0.35□□□□□ -2.35
EBF4Q9BQW3 MIR599-201ENST00000385069 95 ntBASIC0.35□□□□□ -2.35
EBF4Q9BQW3 AC069271.1-201ENST00000445577 156 ntBASIC0.35□□□□□ -2.35
EBF4Q9BQW3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.35□□□□□ -2.35
EBF4Q9BQW3 Y_RNA.709-201ENST00000516952 92 ntBASIC0.35□□□□□ -2.35
EBF4Q9BQW3 MIR4694-201ENST00000578534 80 ntBASIC0.35□□□□□ -2.35
EBF4Q9BQW3 RNU6-90P-201ENST00000606352 106 ntBASIC0.35□□□□□ -2.35
EBF4Q9BQW3 MIR7107-201ENST00000611489 80 ntBASIC0.35□□□□□ -2.35
EBF4Q9BQW3 MIR103A1-201ENST00000362165 78 ntBASIC0.34□□□□□ -2.36
EBF4Q9BQW3 RNU6-170P-201ENST00000362832 104 ntBASIC0.34□□□□□ -2.36
EBF4Q9BQW3 RNU6-957P-201ENST00000363652 99 ntBASIC0.34□□□□□ -2.36
EBF4Q9BQW3 Y_RNA.163-201ENST00000363702 113 ntBASIC0.34□□□□□ -2.36
EBF4Q9BQW3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.34□□□□□ -2.36
EBF4Q9BQW3 Y_RNA.342-201ENST00000365352 113 ntBASIC0.34□□□□□ -2.36
EBF4Q9BQW3 RNU6-716P-201ENST00000365621 103 ntBASIC0.34□□□□□ -2.36
EBF4Q9BQW3 Y_RNA.377-201ENST00000365644 108 ntBASIC0.34□□□□□ -2.36
EBF4Q9BQW3 RNU6-524P-201ENST00000384270 107 ntBASIC0.34□□□□□ -2.36
EBF4Q9BQW3 SNORA8.2-201ENST00000384372 139 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 686.5 ms