Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 Y_RNA.218-201ENST00000364218 104 ntBASIC0.26□□□□□ -2.37
GFI1Q99684 RNU6-726P-201ENST00000364680 107 ntBASIC0.26□□□□□ -2.37
GFI1Q99684 SNORD116-14-201ENST00000383894 92 ntBASIC0.26□□□□□ -2.37
GFI1Q99684 SNORD116-17-201ENST00000383929 92 ntBASIC0.26□□□□□ -2.37
GFI1Q99684 SNORD116-15-201ENST00000384445 92 ntBASIC0.26□□□□□ -2.37
GFI1Q99684 SNORD116-19-201ENST00000384729 92 ntBASIC0.26□□□□□ -2.37
GFI1Q99684 MIR548A3-201ENST00000385297 97 ntBASIC0.26□□□□□ -2.37
GFI1Q99684 MIR548J-201ENST00000408833 112 ntBASIC0.26□□□□□ -2.37
GFI1Q99684 MIR5000-201ENST00000577717 103 ntBASIC0.26□□□□□ -2.37
GFI1Q99684 AC096720.1-201ENST00000604441 183 ntBASIC0.26□□□□□ -2.37
GFI1Q99684 MIR5087-201ENST00000635826 76 ntBASIC0.26□□□□□ -2.37
GFI1Q99684 SNORA25.9-201ENST00000365087 128 ntBASIC0.25□□□□□ -2.37
GFI1Q99684 RNU6-187P-201ENST00000384139 106 ntBASIC0.25□□□□□ -2.37
GFI1Q99684 MIR548G-201ENST00000408442 89 ntBASIC0.25□□□□□ -2.37
GFI1Q99684 AC073261.1-201ENST00000429409 121 ntBASIC0.25□□□□□ -2.37
GFI1Q99684 RNU7-195P-201ENST00000458793 62 ntBASIC0.25□□□□□ -2.37
GFI1Q99684 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
GFI1Q99684 MIR151B-201ENST00000584249 96 ntBASIC0.25□□□□□ -2.37
GFI1Q99684 AL442128.1-201ENST00000615151 90 ntBASIC0.25□□□□□ -2.37
GFI1Q99684 TMSB4XP3-201ENST00000445144 114 ntBASIC0.24□□□□□ -2.37
GFI1Q99684 RNU6-1006P-201ENST00000516998 103 ntBASIC0.24□□□□□ -2.37
GFI1Q99684 AL670379.3-201ENST00000605040 251 ntBASIC0.24□□□□□ -2.37
GFI1Q99684 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.24□□□□□ -2.37
GFI1Q99684 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.23□□□□□ -2.37
GFI1Q99684 Y_RNA.4-201ENST00000362333 112 ntBASIC0.23□□□□□ -2.37
GFI1Q99684 RNU6-1201P-201ENST00000384227 107 ntBASIC0.23□□□□□ -2.37
GFI1Q99684 SNORD41.1-201ENST00000391000 69 ntBASIC0.23□□□□□ -2.37
GFI1Q99684 RNU6-1254P-201ENST00000391266 104 ntBASIC0.23□□□□□ -2.37
GFI1Q99684 MIR4315-1-201ENST00000636800 73 ntBASIC0.23□□□□□ -2.37
GFI1Q99684 MIR4315-2-201ENST00000640925 73 ntBASIC0.23□□□□□ -2.37
GFI1Q99684 SNORA9.1-201ENST00000362412 131 ntBASIC0.22□□□□□ -2.37
GFI1Q99684 Y_RNA.377-201ENST00000365644 108 ntBASIC0.22□□□□□ -2.37
GFI1Q99684 SNORA2A-201ENST00000383885 135 ntBASIC0.22□□□□□ -2.37
GFI1Q99684 Y_RNA.423-201ENST00000384057 113 ntBASIC0.22□□□□□ -2.37
GFI1Q99684 Y_RNA.525-201ENST00000384570 113 ntBASIC0.22□□□□□ -2.37
GFI1Q99684 RNU6-959P-201ENST00000384671 107 ntBASIC0.22□□□□□ -2.37
GFI1Q99684 RNU7-74P-201ENST00000459104 62 ntBASIC0.22□□□□□ -2.37
GFI1Q99684 RNU7-106P-201ENST00000459514 67 ntBASIC0.22□□□□□ -2.37
GFI1Q99684 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.22□□□□□ -2.37
GFI1Q99684 AC069113.3-201ENST00000521019 150 ntBASIC0.22□□□□□ -2.37
GFI1Q99684 AL162376.1-201ENST00000624117 175 ntBASIC0.22□□□□□ -2.37
GFI1Q99684 RNU6-524P-201ENST00000384270 107 ntBASIC0.21□□□□□ -2.38
GFI1Q99684 MIR516A2-201ENST00000384888 90 ntBASIC0.21□□□□□ -2.38
GFI1Q99684 MIR516A1-201ENST00000385033 90 ntBASIC0.21□□□□□ -2.38
GFI1Q99684 MIR548A1-201ENST00000385041 97 ntBASIC0.21□□□□□ -2.38
GFI1Q99684 RNU6-243P-201ENST00000391140 107 ntBASIC0.21□□□□□ -2.38
GFI1Q99684 AL353813.1-201ENST00000440700 253 ntBASIC0.21□□□□□ -2.38
GFI1Q99684 AC008267.6-201ENST00000441664 139 ntBASIC0.21□□□□□ -2.38
GFI1Q99684 SNORD33.1-201ENST00000516213 88 ntBASIC0.21□□□□□ -2.38
GFI1Q99684 RNU7-13P-201ENST00000516413 62 ntBASIC0.21□□□□□ -2.38
GFI1Q99684 RNU6-1223P-201ENST00000517124 104 ntBASIC0.21□□□□□ -2.38
GFI1Q99684 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
GFI1Q99684 AC243829.6-201ENST00000612652 106 ntBASIC0.21□□□□□ -2.38
GFI1Q99684 MIR6513-201ENST00000621188 64 ntBASIC0.21□□□□□ -2.38
GFI1Q99684 AC073869.9-201ENST00000641610 120 ntBASIC0.21□□□□□ -2.38
GFI1Q99684 Y_RNA.57-201ENST00000362806 113 ntBASIC0.2□□□□□ -2.38
GFI1Q99684 Y_RNA.173-201ENST00000363776 113 ntBASIC0.2□□□□□ -2.38
GFI1Q99684 RNU6-81P-201ENST00000365608 104 ntBASIC0.2□□□□□ -2.38
GFI1Q99684 RNU6-815P-201ENST00000384080 113 ntBASIC0.2□□□□□ -2.38
GFI1Q99684 MIR499A-201ENST00000384903 122 ntBASIC0.2□□□□□ -2.38
GFI1Q99684 RNU6-1333P-201ENST00000516162 93 ntBASIC0.2□□□□□ -2.38
GFI1Q99684 AC068339.1-201ENST00000526965 141 ntBASIC0.2□□□□□ -2.38
GFI1Q99684 MIR4694-201ENST00000578534 80 ntBASIC0.2□□□□□ -2.38
GFI1Q99684 MIR5706-201ENST00000579841 80 ntBASIC0.2□□□□□ -2.38
GFI1Q99684 U7.6-201ENST00000610841 64 ntBASIC0.2□□□□□ -2.38
GFI1Q99684 MIR6755-201ENST00000619993 66 ntBASIC0.2□□□□□ -2.38
GFI1Q99684 RNU6-509P-201ENST00000363519 107 ntBASIC0.19□□□□□ -2.38
GFI1Q99684 Y_RNA.323-201ENST00000365157 109 ntBASIC0.19□□□□□ -2.38
GFI1Q99684 Y_RNA.563-201ENST00000384707 108 ntBASIC0.19□□□□□ -2.38
GFI1Q99684 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.19□□□□□ -2.38
GFI1Q99684 RNU6-1265P-201ENST00000516342 103 ntBASIC0.19□□□□□ -2.38
GFI1Q99684 MIR3124-201ENST00000582636 67 ntBASIC0.19□□□□□ -2.38
GFI1Q99684 AC243829.3-201ENST00000622177 108 ntBASIC0.19□□□□□ -2.38
GFI1Q99684 AL035470.1-201ENST00000622571 220 ntBASIC0.19□□□□□ -2.38
GFI1Q99684 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
GFI1Q99684 RNU6-1125P-201ENST00000363601 107 ntBASIC0.18□□□□□ -2.38
GFI1Q99684 Y_RNA.247-201ENST00000364500 92 ntBASIC0.18□□□□□ -2.38
GFI1Q99684 SNORD115-44-201ENST00000365391 82 ntBASIC0.18□□□□□ -2.38
GFI1Q99684 RNU6-480P-201ENST00000384332 107 ntBASIC0.18□□□□□ -2.38
GFI1Q99684 MIR760-201ENST00000390220 80 ntBASIC0.18□□□□□ -2.38
GFI1Q99684 RNU6-412P-201ENST00000516434 106 ntBASIC0.18□□□□□ -2.38
GFI1Q99684 MIR4752-201ENST00000579672 72 ntBASIC0.18□□□□□ -2.38
GFI1Q99684 RNY3P2-201ENST00000362918 102 ntBASIC0.17□□□□□ -2.38
GFI1Q99684 Y_RNA.164-201ENST00000363709 102 ntBASIC0.17□□□□□ -2.38
GFI1Q99684 VTRNA1-3-201ENST00000365645 89 ntBASIC0.17□□□□□ -2.38
GFI1Q99684 RNU7-129P-201ENST00000516128 62 ntBASIC0.17□□□□□ -2.38
GFI1Q99684 MIR4711-201ENST00000578274 70 ntBASIC0.17□□□□□ -2.38
GFI1Q99684 MIR5009-201ENST00000578736 100 ntBASIC0.17□□□□□ -2.38
GFI1Q99684 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.17□□□□□ -2.38
GFI1Q99684 U8.6-201ENST00000364939 135 ntBASIC0.16□□□□□ -2.38
GFI1Q99684 RNA5SP128-201ENST00000365305 116 ntBASIC0.16□□□□□ -2.38
GFI1Q99684 Y_RNA.353-201ENST00000365440 108 ntBASIC0.16□□□□□ -2.38
GFI1Q99684 RNU6-880P-201ENST00000384526 107 ntBASIC0.16□□□□□ -2.38
GFI1Q99684 Y_RNA.549-201ENST00000384657 102 ntBASIC0.16□□□□□ -2.38
GFI1Q99684 MIR577-201ENST00000385196 96 ntBASIC0.16□□□□□ -2.38
GFI1Q99684 RNU6-269P-201ENST00000391077 97 ntBASIC0.16□□□□□ -2.38
GFI1Q99684 RNA5SP247-201ENST00000411181 105 ntBASIC0.16□□□□□ -2.38
GFI1Q99684 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.16□□□□□ -2.38
GFI1Q99684 RNU6-1232P-201ENST00000516299 86 ntBASIC0.16□□□□□ -2.38
GFI1Q99684 MIR3920-201ENST00000581751 86 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms