Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 HAR1A.1-201ENST00000459583 118 ntBASIC1.45□□□□□ -2.18
CHAMP1Q96JM3 RNA5SP395-201ENST00000516567 118 ntBASIC1.45□□□□□ -2.18
CHAMP1Q96JM3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CHAMP1Q96JM3 RNA5SP457-201ENST00000363657 124 ntBASIC1.44□□□□□ -2.18
CHAMP1Q96JM3 SNORD26-201ENST00000384147 75 ntBASIC1.44□□□□□ -2.18
CHAMP1Q96JM3 SNORA25-201ENST00000384384 134 ntBASIC1.44□□□□□ -2.18
CHAMP1Q96JM3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.44□□□□□ -2.18
CHAMP1Q96JM3 RNU6-850P-201ENST00000516934 103 ntBASIC1.44□□□□□ -2.18
CHAMP1Q96JM3 MIR1273G-201ENST00000577677 100 ntBASIC1.44□□□□□ -2.18
CHAMP1Q96JM3 AC027335.2-201ENST00000624030 375 ntBASIC1.44□□□□□ -2.18
CHAMP1Q96JM3 Y_RNA.13-201ENST00000362403 112 ntBASIC1.43□□□□□ -2.18
CHAMP1Q96JM3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.43□□□□□ -2.18
CHAMP1Q96JM3 RNU6-403P-201ENST00000363163 104 ntBASIC1.43□□□□□ -2.18
CHAMP1Q96JM3 RNU6-571P-201ENST00000384128 107 ntBASIC1.43□□□□□ -2.18
CHAMP1Q96JM3 MIR181B2-201ENST00000385004 89 ntBASIC1.43□□□□□ -2.18
CHAMP1Q96JM3 RNU6-1194P-201ENST00000516208 104 ntBASIC1.43□□□□□ -2.18
CHAMP1Q96JM3 AC026421.1-201ENST00000519101 163 ntBASIC1.43□□□□□ -2.18
CHAMP1Q96JM3 MIR4676-201ENST00000583078 72 ntBASIC1.43□□□□□ -2.18
CHAMP1Q96JM3 MIR6082-201ENST00000613604 109 ntBASIC1.43□□□□□ -2.18
CHAMP1Q96JM3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
CHAMP1Q96JM3 RNU4-58P-201ENST00000363192 141 ntBASIC1.42□□□□□ -2.18
CHAMP1Q96JM3 Y_RNA.115-201ENST00000363272 98 ntBASIC1.42□□□□□ -2.18
CHAMP1Q96JM3 MIR3660-201ENST00000584845 100 ntBASIC1.42□□□□□ -2.18
CHAMP1Q96JM3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CHAMP1Q96JM3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHAMP1Q96JM3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHAMP1Q96JM3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CHAMP1Q96JM3 SNORA40.6-201ENST00000391153 128 ntBASIC1.41□□□□□ -2.18
CHAMP1Q96JM3 RNA5SP476-201ENST00000516613 103 ntBASIC1.41□□□□□ -2.18
CHAMP1Q96JM3 RNU6-765P-201ENST00000516916 99 ntBASIC1.41□□□□□ -2.18
CHAMP1Q96JM3 AL513043.2-201ENST00000573941 143 ntBASIC1.41□□□□□ -2.18
CHAMP1Q96JM3 SNORD92-201ENST00000585078 85 ntBASIC1.41□□□□□ -2.18
CHAMP1Q96JM3 AC013244.2-201ENST00000603396 103 ntBASIC1.41□□□□□ -2.18
CHAMP1Q96JM3 AC025521.1-201ENST00000621624 286 ntBASIC1.41□□□□□ -2.18
CHAMP1Q96JM3 SNORD116-10-201ENST00000363791 102 ntBASIC1.4□□□□□ -2.19
CHAMP1Q96JM3 SNORD73B-201ENST00000364394 72 ntBASIC1.4□□□□□ -2.19
CHAMP1Q96JM3 SNORA72.6-201ENST00000384520 129 ntBASIC1.4□□□□□ -2.19
CHAMP1Q96JM3 Y_RNA.558-201ENST00000384685 113 ntBASIC1.4□□□□□ -2.19
CHAMP1Q96JM3 RNU6-762P-201ENST00000517107 102 ntBASIC1.4□□□□□ -2.19
CHAMP1Q96JM3 RNU7-156P-201ENST00000517214 74 ntBASIC1.4□□□□□ -2.19
CHAMP1Q96JM3 MIR4804-201ENST00000581683 73 ntBASIC1.4□□□□□ -2.19
CHAMP1Q96JM3 RNU6-1125P-201ENST00000363601 107 ntBASIC1.39□□□□□ -2.19
CHAMP1Q96JM3 RNU6-480P-201ENST00000384332 107 ntBASIC1.39□□□□□ -2.19
CHAMP1Q96JM3 MIR19B1-201ENST00000384829 87 ntBASIC1.39□□□□□ -2.19
CHAMP1Q96JM3 RNU7-56P-201ENST00000458744 62 ntBASIC1.39□□□□□ -2.19
CHAMP1Q96JM3 MIR1827-201ENST00000408549 66 ntBASIC1.38□□□□□ -2.19
CHAMP1Q96JM3 MIR5000-201ENST00000577717 103 ntBASIC1.38□□□□□ -2.19
CHAMP1Q96JM3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
CHAMP1Q96JM3 RNA5SP62-201ENST00000363457 110 ntBASIC1.37□□□□□ -2.19
CHAMP1Q96JM3 MIR222-201ENST00000384992 110 ntBASIC1.37□□□□□ -2.19
CHAMP1Q96JM3 MIR938-201ENST00000401216 83 ntBASIC1.37□□□□□ -2.19
CHAMP1Q96JM3 SNORD100-201ENST00000408573 76 ntBASIC1.37□□□□□ -2.19
CHAMP1Q96JM3 RNU6-994P-201ENST00000410507 111 ntBASIC1.37□□□□□ -2.19
CHAMP1Q96JM3 AC008608.1-201ENST00000603910 127 ntBASIC1.37□□□□□ -2.19
CHAMP1Q96JM3 AL590095.2-201ENST00000604136 117 ntBASIC1.37□□□□□ -2.19
CHAMP1Q96JM3 Y_RNA.57-201ENST00000362806 113 ntBASIC1.36□□□□□ -2.19
CHAMP1Q96JM3 Y_RNA.593-201ENST00000410292 98 ntBASIC1.36□□□□□ -2.19
CHAMP1Q96JM3 RNU7-106P-201ENST00000459514 67 ntBASIC1.36□□□□□ -2.19
CHAMP1Q96JM3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
CHAMP1Q96JM3 Y_RNA.17-201ENST00000362433 111 ntBASIC1.35□□□□□ -2.19
CHAMP1Q96JM3 SNORD36A-201ENST00000362874 73 ntBASIC1.35□□□□□ -2.19
CHAMP1Q96JM3 MIR516A2-201ENST00000384888 90 ntBASIC1.35□□□□□ -2.19
CHAMP1Q96JM3 MIR516A1-201ENST00000385033 90 ntBASIC1.35□□□□□ -2.19
CHAMP1Q96JM3 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
CHAMP1Q96JM3 MIR1285-1-201ENST00000408593 84 ntBASIC1.35□□□□□ -2.19
CHAMP1Q96JM3 RNU7-102P-201ENST00000458948 62 ntBASIC1.35□□□□□ -2.19
CHAMP1Q96JM3 TRAJ51-201ENST00000504127 63 ntBASIC1.35□□□□□ -2.19
CHAMP1Q96JM3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.35□□□□□ -2.19
CHAMP1Q96JM3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.35□□□□□ -2.19
CHAMP1Q96JM3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CHAMP1Q96JM3 MIR1-1-201ENST00000362147 71 ntBASIC1.34□□□□□ -2.19
CHAMP1Q96JM3 Y_RNA.56-201ENST00000362798 112 ntBASIC1.34□□□□□ -2.19
CHAMP1Q96JM3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.34□□□□□ -2.19
CHAMP1Q96JM3 MIR1302-4-201ENST00000408701 150 ntBASIC1.34□□□□□ -2.19
CHAMP1Q96JM3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.34□□□□□ -2.19
CHAMP1Q96JM3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.34□□□□□ -2.19
CHAMP1Q96JM3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
CHAMP1Q96JM3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CHAMP1Q96JM3 RNU6-219P-201ENST00000364728 107 ntBASIC1.33□□□□□ -2.2
CHAMP1Q96JM3 RNU6-675P-201ENST00000384236 104 ntBASIC1.33□□□□□ -2.2
CHAMP1Q96JM3 MIR100-201ENST00000385259 80 ntBASIC1.33□□□□□ -2.2
CHAMP1Q96JM3 SNORD63B-201ENST00000411005 70 ntBASIC1.33□□□□□ -2.2
CHAMP1Q96JM3 RNU6-977P-201ENST00000516411 103 ntBASIC1.33□□□□□ -2.2
CHAMP1Q96JM3 RNU6-448P-201ENST00000517052 107 ntBASIC1.33□□□□□ -2.2
CHAMP1Q96JM3 AC062037.1-201ENST00000605302 128 ntBASIC1.33□□□□□ -2.2
CHAMP1Q96JM3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CHAMP1Q96JM3 RNU6-1134P-201ENST00000365156 101 ntBASIC1.32□□□□□ -2.2
CHAMP1Q96JM3 RNU6-364P-201ENST00000384387 107 ntBASIC1.32□□□□□ -2.2
CHAMP1Q96JM3 Y_RNA.536-201ENST00000384621 113 ntBASIC1.32□□□□□ -2.2
CHAMP1Q96JM3 MIR519A1-201ENST00000385257 85 ntBASIC1.32□□□□□ -2.2
CHAMP1Q96JM3 MIR101-2-201ENST00000362195 79 ntBASIC1.31□□□□□ -2.2
CHAMP1Q96JM3 RNU1-124P-201ENST00000363861 145 ntBASIC1.31□□□□□ -2.2
CHAMP1Q96JM3 RNU6-497P-201ENST00000365316 104 ntBASIC1.31□□□□□ -2.2
CHAMP1Q96JM3 Y_RNA.388-201ENST00000383919 113 ntBASIC1.31□□□□□ -2.2
CHAMP1Q96JM3 SNORD116-22-201ENST00000384430 92 ntBASIC1.31□□□□□ -2.2
CHAMP1Q96JM3 RNY4P29-201ENST00000410801 97 ntBASIC1.31□□□□□ -2.2
CHAMP1Q96JM3 Y_RNA.620-201ENST00000411009 88 ntBASIC1.31□□□□□ -2.2
CHAMP1Q96JM3 SNORD124-201ENST00000459577 104 ntBASIC1.31□□□□□ -2.2
CHAMP1Q96JM3 RNA5SP404-201ENST00000517118 132 ntBASIC1.31□□□□□ -2.2
CHAMP1Q96JM3 MIR548H5-201ENST00000580314 60 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms